RNA–Protein interactions for RNA: ENST00000447696.5

MRPL28-205, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 3

Gene MRPL28, Length 722 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-205ENST00000447696 CHMP4AQ9BY43 222 aa31.07■■■□□ 2.56
MRPL28-205ENST00000447696 ERFEQ4G0M1 354 aa31.06■■■□□ 2.56
MRPL28-205ENST00000447696 SOGA3Q5TF21 947 aa31.06■■■□□ 2.56
MRPL28-205ENST00000447696 NUTM1Q86Y26 1132 aa31.06■■■□□ 2.56
MRPL28-205ENST00000447696 RNF123Q5XPI4 1314 aa31.05■■■□□ 2.56
MRPL28-205ENST00000447696 C21orf2O43822 256 aa31.05■■■□□ 2.56
MRPL28-205ENST00000447696 RASSF7Q02833 373 aa31.05■■■□□ 2.56
MRPL28-205ENST00000447696 CRY2Q49AN0 593 aa31.05■■■□□ 2.56
MRPL28-205ENST00000447696 ANKRD36CQ5JPF3 1778 aa31.05■■■□□ 2.56
MRPL28-205ENST00000447696 SBF1O95248 1867 aa31.04■■■□□ 2.56
MRPL28-205ENST00000447696 NFKBIEO00221 500 aa31.04■■■□□ 2.56
MRPL28-205ENST00000447696 LMNB1P20700 586 aa31.04■■■□□ 2.56
MRPL28-205ENST00000447696 TNS4Q8IZW8 715 aa31.04■■■□□ 2.56
MRPL28-205ENST00000447696 PLBD2Q8NHP8 589 aa31.04■■■□□ 2.56
MRPL28-205ENST00000447696 SLX4Q8IY92 1834 aa31.03■■■□□ 2.56
MRPL28-205ENST00000447696 VEGFAP15692 232 aaPredicted RBP31.03■■■□□ 2.56
MRPL28-205ENST00000447696 TCIRG1Q13488 830 aa31.03■■■□□ 2.56
MRPL28-205ENST00000447696 C8orf58Q8NAV2 365 aa31.03■■■□□ 2.56
MRPL28-205ENST00000447696 UTP14AQ9BVJ6 771 aaKnown RBP31.02■■■□□ 2.56
MRPL28-205ENST00000447696 LTBP3Q9NS15 1303 aa31.01■■■□□ 2.56
MRPL28-205ENST00000447696 GLTPD2A6NH11 291 aa31.01■■■□□ 2.55
MRPL28-205ENST00000447696 ELL2O00472 640 aaPredicted RBP31.01■■■□□ 2.55
MRPL28-205ENST00000447696 ANKRD13DQ6ZTN6 518 aa31.01■■■□□ 2.55
MRPL28-205ENST00000447696 ALDH1B1P30837 517 aa31■■■□□ 2.55
MRPL28-205ENST00000447696 NLRP10Q86W26 655 aa31■■■□□ 2.55
MRPL28-205ENST00000447696 C7orf43Q8WVR3 580 aa31■■■□□ 2.55
MRPL28-205ENST00000447696 ZNF219Q9P2Y4 722 aaPredicted RBP31■■■□□ 2.55
MRPL28-205ENST00000447696 FER1L6Q2WGJ9 1857 aa30.99■■■□□ 2.55
MRPL28-205ENST00000447696 PRELPP51888 382 aa30.99■■■□□ 2.55
MRPL28-205ENST00000447696 WDR63Q8IWG1 891 aa30.99■■■□□ 2.55
MRPL28-205ENST00000447696 FAM9BQ8IZU0 186 aa30.99■■■□□ 2.55
MRPL28-205ENST00000447696 TSR2Q969E8 191 aaKnown RBP30.99■■■□□ 2.55
MRPL28-205ENST00000447696 CACNA1SQ13698 1873 aa30.98■■■□□ 2.55
MRPL28-205ENST00000447696 HOXA10P31260 410 aaPredicted RBP30.98■■■□□ 2.55
MRPL28-205ENST00000447696 SLC10A5Q5PT55 438 aa30.98■■■□□ 2.55
MRPL28-205ENST00000447696 CCDC30Q5VVM6 783 aa30.98■■■□□ 2.55
MRPL28-205ENST00000447696 TAOK3Q9H2K8 898 aa30.97■■■□□ 2.55
MRPL28-205ENST00000447696 CCDC93Q567U6 631 aa30.96■■■□□ 2.55
MRPL28-205ENST00000447696 RPGRQ92834 1020 aaKnown RBP30.96■■■□□ 2.55
MRPL28-205ENST00000447696 TSPYL6Q8N831 410 aa30.95■■■□□ 2.55
MRPL28-205ENST00000447696 GOLGA2Q08379 1002 aa30.94■■■□□ 2.54
MRPL28-205ENST00000447696 NLRP3Q96P20 1036 aa30.94■■■□□ 2.54
MRPL28-205ENST00000447696 ISCA1Q9BUE6 129 aa30.94■■■□□ 2.54
MRPL28-205ENST00000447696 SH3TC1Q8TE82 1336 aa30.93■■■□□ 2.54
MRPL28-205ENST00000447696 CRAMP1Q96RY5 1269 aa30.92■■■□□ 2.54
MRPL28-205ENST00000447696 TRMT112Q9UI30 125 aaKnown RBP30.92■■■□□ 2.54
MRPL28-205ENST00000447696 PCNTO95613 3336 aa30.91■■■□□ 2.54
MRPL28-205ENST00000447696 TIAM2Q8IVF5 1701 aa30.91■■■□□ 2.54
MRPL28-205ENST00000447696 CAPN15O75808 1086 aa30.91■■■□□ 2.54
MRPL28-205ENST00000447696 TRIM28Q13263 835 aaKnown RBP30.91■■■□□ 2.54
MRPL28-205ENST00000447696 TWISTNBQ3B726 338 aaPredicted RBP30.91■■■□□ 2.54
MRPL28-205ENST00000447696 DPY19L2Q6NUT2 758 aa30.91■■■□□ 2.54
MRPL28-205ENST00000447696 RTKN2Q8IZC4 609 aa30.91■■■□□ 2.54
MRPL28-205ENST00000447696 RBM17Q96I25 401 aaKnown RBP30.91■■■□□ 2.54
MRPL28-205ENST00000447696 PHAXQ9H814 394 aaKnown RBP30.91■■■□□ 2.54
MRPL28-205ENST00000447696 SALL2Q9Y467 1007 aaPredicted RBP30.91■■■□□ 2.54
MRPL28-205ENST00000447696 FANCIQ9NVI1 1328 aa30.91■■■□□ 2.54
MRPL28-205ENST00000447696 C3orf67Q6ZVT6 689 aa30.9■■■□□ 2.54
MRPL28-205ENST00000447696 CC2D2BQ6DHV5 1058 aa30.89■■■□□ 2.54
MRPL28-205ENST00000447696 RIC3Q7Z5B4 369 aa30.89■■■□□ 2.54
MRPL28-205ENST00000447696 STK31Q9BXU1 1019 aa30.89■■■□□ 2.54
MRPL28-205ENST00000447696 DDX58O95786 925 aaKnown RBP30.88■■■□□ 2.53
MRPL28-205ENST00000447696 HSPA1AP0DMV8 641 aaKnown RBP30.88■■■□□ 2.53
MRPL28-205ENST00000447696 HSPA1BP0DMV9 641 aaKnown RBP30.88■■■□□ 2.53
MRPL28-205ENST00000447696 FKBP4Q02790 459 aaKnown RBP eCLIP30.88■■■□□ 2.53
MRPL28-205ENST00000447696 CCDC88AQ3V6T2 1871 aa30.87■■■□□ 2.53
MRPL28-205ENST00000447696 DICER1Q9UPY3 1922 aaKnown RBP30.86■■■□□ 2.53
MRPL28-205ENST00000447696 ATP5J2-PTCD1G3V325 749 aa30.86■■■□□ 2.53
MRPL28-205ENST00000447696 SNED1Q8TER0 1413 aa30.86■■■□□ 2.53
MRPL28-205ENST00000447696 HCLS1P14317 486 aaPredicted RBP30.85■■■□□ 2.53
MRPL28-205ENST00000447696 GRIPAP1Q4V328 841 aa30.85■■■□□ 2.53
MRPL28-205ENST00000447696 OLFM4Q6UX06 510 aa30.84■■■□□ 2.53
MRPL28-205ENST00000447696 SYNE4Q8N205 404 aa30.84■■■□□ 2.53
MRPL28-205ENST00000447696 PPEF1O14829 653 aaPredicted RBP30.83■■■□□ 2.53
MRPL28-205ENST00000447696 MYH16Q9H6N6 1097 aa30.83■■■□□ 2.53
MRPL28-205ENST00000447696 LAMB2P55268 1798 aa30.82■■■□□ 2.52
MRPL28-205ENST00000447696 PSMD1Q99460 953 aa30.82■■■□□ 2.52
MRPL28-205ENST00000447696 ABCC4O15439 1325 aa30.81■■■□□ 2.52
MRPL28-205ENST00000447696 METTL22Q9BUU2 404 aaPredicted RBP30.81■■■□□ 2.52
MRPL28-205ENST00000447696 ZNF521Q96K83 1311 aa30.8■■■□□ 2.52
MRPL28-205ENST00000447696 CCDC191Q8NCU4 936 aa30.8■■■□□ 2.52
MRPL28-205ENST00000447696 FAM89AQ96GI7 184 aa30.8■■■□□ 2.52
MRPL28-205ENST00000447696 MYD88Q99836 296 aa30.8■■■□□ 2.52
MRPL28-205ENST00000447696 DDX60Q8IY21 1712 aaKnown RBP30.79■■■□□ 2.52
MRPL28-205ENST00000447696 CCER2I3L3R5 266 aa30.79■■■□□ 2.52
MRPL28-205ENST00000447696 EXOSC9Q06265 439 aaKnown RBP30.79■■■□□ 2.52
MRPL28-205ENST00000447696 KSR2Q6VAB6 950 aa30.79■■■□□ 2.52
MRPL28-205ENST00000447696 SPINK5Q9NQ38 1064 aaPredicted RBP30.79■■■□□ 2.52
MRPL28-205ENST00000447696 POTECB2RU33 542 aa30.78■■■□□ 2.52
MRPL28-205ENST00000447696 SLC4A2P04920 1241 aa30.78■■■□□ 2.52
MRPL28-205ENST00000447696 DDX46Q7L014 1031 aaKnown RBP30.78■■■□□ 2.52
MRPL28-205ENST00000447696 ZBTB38Q8NAP3 1195 aaPredicted RBP30.78■■■□□ 2.52
MRPL28-205ENST00000447696 ZNF277Q9NRM2 450 aaPredicted RBP30.78■■■□□ 2.52
MRPL28-205ENST00000447696 MAP3K2Q9Y2U5 619 aa30.78■■■□□ 2.52
MRPL28-205ENST00000447696 TCERG1O14776 1098 aaKnown RBP30.77■■■□□ 2.52
MRPL28-205ENST00000447696 VAMP4O75379 141 aa30.77■■■□□ 2.52
MRPL28-205ENST00000447696 BBOX1O75936 387 aa30.77■■■□□ 2.52
MRPL28-205ENST00000447696 HSP90B1P14625 803 aaKnown RBP30.77■■■□□ 2.52
MRPL28-205ENST00000447696 TMX4Q9H1E5 349 aaPredicted RBP30.77■■■□□ 2.52
MRPL28-205ENST00000447696 CREBZFQ9NS37 354 aa30.77■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms