RNA–Protein interactions for RNA: ENST00000447419.6

PTX4-203, Transcript of pentraxin 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTX4, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX4-203ENST00000447419 TRMT112Q9UI30 125 aaKnown RBP26.31■■□□□ 1.8
PTX4-203ENST00000447419 YY1P25490 414 aa26.3■■□□□ 1.8
PTX4-203ENST00000447419 ARHGAP27Q6ZUM4 889 aa26.3■■□□□ 1.8
PTX4-203ENST00000447419 DDX58O95786 925 aaKnown RBP26.29■■□□□ 1.8
PTX4-203ENST00000447419 SRGNP10124 158 aa26.29■■□□□ 1.8
PTX4-203ENST00000447419 COL11A2P13942 1736 aaPredicted RBP26.29■■□□□ 1.8
PTX4-203ENST00000447419 HCLS1P14317 486 aaPredicted RBP26.29■■□□□ 1.8
PTX4-203ENST00000447419 FLIIQ13045 1269 aa26.29■■□□□ 1.8
PTX4-203ENST00000447419 TTLL6Q8N841 843 aa26.29■■□□□ 1.8
PTX4-203ENST00000447419 JARID2Q92833 1246 aaPredicted RBP26.29■■□□□ 1.8
PTX4-203ENST00000447419 ISCA1Q9BUE6 129 aa26.29■■□□□ 1.8
PTX4-203ENST00000447419 TNRC6CQ9HCJ0 1690 aaKnown RBP26.28■■□□□ 1.8
PTX4-203ENST00000447419 ADCY9O60503 1353 aa26.28■■□□□ 1.8
PTX4-203ENST00000447419 FKBP5Q13451 457 aaPredicted RBP26.28■■□□□ 1.8
PTX4-203ENST00000447419 FAM89AQ96GI7 184 aa26.28■■□□□ 1.8
PTX4-203ENST00000447419 BCL2L13Q9BXK5 485 aa26.28■■□□□ 1.8
PTX4-203ENST00000447419 KSR2Q6VAB6 950 aa26.27■■□□□ 1.8
PTX4-203ENST00000447419 ARFGEF2Q9Y6D5 1785 aa26.26■■□□□ 1.79
PTX4-203ENST00000447419 MASTLQ96GX5 879 aa26.26■■□□□ 1.79
PTX4-203ENST00000447419 METTL22Q9BUU2 404 aaPredicted RBP26.26■■□□□ 1.79
PTX4-203ENST00000447419 IBTKQ9P2D0 1353 aaPredicted RBP26.26■■□□□ 1.79
PTX4-203ENST00000447419 BRCA1P38398 1863 aaKnown RBP26.25■■□□□ 1.79
PTX4-203ENST00000447419 F6X3S4 739 aa26.24■■□□□ 1.79
PTX4-203ENST00000447419 C21orf2O43822 256 aa26.24■■□□□ 1.79
PTX4-203ENST00000447419 TRMT2AQ8IZ69 625 aaKnown RBP26.24■■□□□ 1.79
PTX4-203ENST00000447419 ANKRD36CQ5JPF3 1778 aa26.24■■□□□ 1.79
PTX4-203ENST00000447419 CWF19L2Q2TBE0 894 aaKnown RBP26.24■■□□□ 1.79
PTX4-203ENST00000447419 STYK1Q6J9G0 422 aa26.24■■□□□ 1.79
PTX4-203ENST00000447419 PRPF40BQ6NWY9 871 aaKnown RBP26.24■■□□□ 1.79
PTX4-203ENST00000447419 SH3TC1Q8TE82 1336 aa26.24■■□□□ 1.79
PTX4-203ENST00000447419 KLRG2A4D1S0 409 aaPredicted RBP26.23■■□□□ 1.79
PTX4-203ENST00000447419 NPR1P16066 1061 aa26.23■■□□□ 1.79
PTX4-203ENST00000447419 OLFM4Q6UX06 510 aa26.23■■□□□ 1.79
PTX4-203ENST00000447419 SLC51AQ86UW1 340 aa26.23■■□□□ 1.79
PTX4-203ENST00000447419 IGKV5-2P06315 115 aa26.22■■□□□ 1.79
PTX4-203ENST00000447419 RPGRQ92834 1020 aaKnown RBP26.22■■□□□ 1.79
PTX4-203ENST00000447419 PDZRN3Q9UPQ7 1066 aa26.22■■□□□ 1.79
PTX4-203ENST00000447419 RASSF7Q02833 373 aa26.21■■□□□ 1.79
PTX4-203ENST00000447419 SSH1Q8WYL5 1049 aa26.21■■□□□ 1.79
PTX4-203ENST00000447419 CNKSR1Q969H4 720 aa26.21■■□□□ 1.79
PTX4-203ENST00000447419 NLRP3Q96P20 1036 aa26.21■■□□□ 1.79
PTX4-203ENST00000447419 DLEC1Q9Y238 1755 aa26.2■■□□□ 1.79
PTX4-203ENST00000447419 CRY2Q49AN0 593 aa26.19■■□□□ 1.78
PTX4-203ENST00000447419 CWC25Q9NXE8 425 aaPredicted RBP26.19■■□□□ 1.78
PTX4-203ENST00000447419 NEXNQ0ZGT2 675 aa26.19■■□□□ 1.78
PTX4-203ENST00000447419 TRIM28Q13263 835 aaKnown RBP26.19■■□□□ 1.78
PTX4-203ENST00000447419 SLC10A5Q5PT55 438 aa26.19■■□□□ 1.78
PTX4-203ENST00000447419 MRPL50Q8N5N7 158 aaKnown RBP26.19■■□□□ 1.78
PTX4-203ENST00000447419 DNAAF4Q8WXU2 420 aa26.19■■□□□ 1.78
PTX4-203ENST00000447419 CCDC191Q8NCU4 936 aa26.18■■□□□ 1.78
PTX4-203ENST00000447419 IRS4O14654 1257 aaPredicted RBP26.17■■□□□ 1.78
PTX4-203ENST00000447419 NEURL1BA8MQ27 555 aa26.16■■□□□ 1.78
PTX4-203ENST00000447419 ZBTB38Q8NAP3 1195 aaPredicted RBP26.16■■□□□ 1.78
PTX4-203ENST00000447419 RNF123Q5XPI4 1314 aa26.15■■□□□ 1.78
PTX4-203ENST00000447419 SLC4A10Q6U841 1118 aa26.15■■□□□ 1.78
PTX4-203ENST00000447419 CCDC85AQ96PX6 553 aaPredicted RBP26.15■■□□□ 1.78
PTX4-203ENST00000447419 SMC4Q9NTJ3 1288 aa26.15■■□□□ 1.78
PTX4-203ENST00000447419 SLX4Q8IY92 1834 aa26.15■■□□□ 1.78
PTX4-203ENST00000447419 RIC1Q4ADV7 1423 aa26.14■■□□□ 1.78
PTX4-203ENST00000447419 RBM17Q96I25 401 aaKnown RBP26.14■■□□□ 1.78
PTX4-203ENST00000447419 NFKBIEO00221 500 aa26.14■■□□□ 1.77
PTX4-203ENST00000447419 PRELPP51888 382 aa26.14■■□□□ 1.77
PTX4-203ENST00000447419 CACNA1SQ13698 1873 aa26.14■■□□□ 1.77
PTX4-203ENST00000447419 ALDH1B1P30837 517 aa26.13■■□□□ 1.77
PTX4-203ENST00000447419 C9orf131Q5VYM1 1079 aa26.13■■□□□ 1.77
PTX4-203ENST00000447419 ARFGEF1Q9Y6D6 1849 aa26.13■■□□□ 1.77
PTX4-203ENST00000447419 ABCC4O15439 1325 aa26.12■■□□□ 1.77
PTX4-203ENST00000447419 PCCAP05165 728 aaPredicted RBP26.12■■□□□ 1.77
PTX4-203ENST00000447419 HOXA10P31260 410 aaPredicted RBP26.12■■□□□ 1.77
PTX4-203ENST00000447419 ZNF526Q8TF50 670 aaPredicted RBP26.12■■□□□ 1.77
PTX4-203ENST00000447419 C7orf43Q8WVR3 580 aa26.12■■□□□ 1.77
PTX4-203ENST00000447419 UBE3BQ7Z3V4 1068 aa26.11■■□□□ 1.77
PTX4-203ENST00000447419 RNF181Q9P0P0 153 aa26.11■■□□□ 1.77
PTX4-203ENST00000447419 ZBED9Q6R2W3 1325 aa26.11■■□□□ 1.77
PTX4-203ENST00000447419 GCKRQ14397 625 aa26.1■■□□□ 1.77
PTX4-203ENST00000447419 PPEF1O14829 653 aaPredicted RBP26.09■■□□□ 1.77
PTX4-203ENST00000447419 BEND3Q5T5X7 828 aa26.09■■□□□ 1.77
PTX4-203ENST00000447419 LINS1Q8NG48 757 aa26.09■■□□□ 1.77
PTX4-203ENST00000447419 DDX46Q7L014 1031 aaKnown RBP26.09■■□□□ 1.77
PTX4-203ENST00000447419 ZNF784Q8NCA9 323 aaPredicted RBP26.09■■□□□ 1.77
PTX4-203ENST00000447419 CRAMP1Q96RY5 1269 aa26.09■■□□□ 1.77
PTX4-203ENST00000447419 DDX60Q8IY21 1712 aaKnown RBP26.08■■□□□ 1.77
PTX4-203ENST00000447419 ALDH1L2Q3SY69 923 aa26.08■■□□□ 1.77
PTX4-203ENST00000447419 CCDC93Q567U6 631 aa26.08■■□□□ 1.77
PTX4-203ENST00000447419 CHD4Q14839 1912 aa26.08■■□□□ 1.76
PTX4-203ENST00000447419 RARSP54136 660 aaKnown RBP26.07■■□□□ 1.76
PTX4-203ENST00000447419 TAOK3Q9H2K8 898 aa26.06■■□□□ 1.76
PTX4-203ENST00000447419 SEC31BQ9NQW1 1179 aa26.06■■□□□ 1.76
PTX4-203ENST00000447419 NOB1Q9ULX3 412 aaKnown RBP26.06■■□□□ 1.76
PTX4-203ENST00000447419 LAMB2P55268 1798 aa26.06■■□□□ 1.76
PTX4-203ENST00000447419 H7C1W4 665 aa26.05■■□□□ 1.76
PTX4-203ENST00000447419 PDE8AO60658 829 aa26.05■■□□□ 1.76
PTX4-203ENST00000447419 SF3B3Q15393 1217 aaKnown RBP26.05■■□□□ 1.76
PTX4-203ENST00000447419 CELF1Q92879 486 aaKnown RBP26.05■■□□□ 1.76
PTX4-203ENST00000447419 COL4A1P02462 1669 aa26.05■■□□□ 1.76
PTX4-203ENST00000447419 CT47B1P0C2W7 299 aaPredicted RBP26.04■■□□□ 1.76
PTX4-203ENST00000447419 LMNB1P20700 586 aa26.04■■□□□ 1.76
PTX4-203ENST00000447419 GRAPQ13588 217 aa26.04■■□□□ 1.76
PTX4-203ENST00000447419 GRAPLQ8TC17 118 aaPredicted RBP26.04■■□□□ 1.76
PTX4-203ENST00000447419 ZNF277Q9NRM2 450 aaPredicted RBP26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms