RNA–Protein interactions for RNA: ENST00000447394.1

HLA-DOB-207, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-207ENST00000447394 SLC4A10Q6U841 1118 aa16.9■□□□□ 0.3
HLA-DOB-207ENST00000447394 CNBD1Q8NA66 436 aa16.9■□□□□ 0.3
HLA-DOB-207ENST00000447394 NLGN2Q8NFZ4 835 aa16.9■□□□□ 0.3
HLA-DOB-207ENST00000447394 TAF1P21675 1872 aa16.9■□□□□ 0.3
HLA-DOB-207ENST00000447394 PTPRCP08575 1304 aa16.9■□□□□ 0.3
HLA-DOB-207ENST00000447394 PXDNLA1KZ92 1463 aa16.89■□□□□ 0.29
HLA-DOB-207ENST00000447394 ERFEQ4G0M1 354 aa16.89■□□□□ 0.29
HLA-DOB-207ENST00000447394 RCAN3Q9UKA8 241 aa16.89■□□□□ 0.29
HLA-DOB-207ENST00000447394 KIF16BQ96L93 1317 aa16.89■□□□□ 0.29
HLA-DOB-207ENST00000447394 IBTKQ9P2D0 1353 aaPredicted RBP16.89■□□□□ 0.29
HLA-DOB-207ENST00000447394 NEURL1BA8MQ27 555 aa16.88■□□□□ 0.29
HLA-DOB-207ENST00000447394 NPHP1O15259 732 aa16.88■□□□□ 0.29
HLA-DOB-207ENST00000447394 BRPF1P55201 1214 aaPredicted RBP16.88■□□□□ 0.29
HLA-DOB-207ENST00000447394 PARP10Q53GL7 1025 aa16.88■□□□□ 0.29
HLA-DOB-207ENST00000447394 WWC3Q9ULE0 1092 aa16.88■□□□□ 0.29
HLA-DOB-207ENST00000447394 SPEF2Q9C093 1822 aa16.87■□□□□ 0.29
HLA-DOB-207ENST00000447394 BEND3Q5T5X7 828 aa16.87■□□□□ 0.29
HLA-DOB-207ENST00000447394 C3orf67Q6ZVT6 689 aa16.87■□□□□ 0.29
HLA-DOB-207ENST00000447394 UTP14AQ9BVJ6 771 aaKnown RBP16.87■□□□□ 0.29
HLA-DOB-207ENST00000447394 TRMT112Q9UI30 125 aaKnown RBP16.87■□□□□ 0.29
HLA-DOB-207ENST00000447394 COL4A1P02462 1669 aa16.87■□□□□ 0.29
HLA-DOB-207ENST00000447394 TRIM27P14373 513 aa16.86■□□□□ 0.29
HLA-DOB-207ENST00000447394 CHRNA5P30532 468 aa16.86■□□□□ 0.29
HLA-DOB-207ENST00000447394 NEXNQ0ZGT2 675 aa16.86■□□□□ 0.29
HLA-DOB-207ENST00000447394 CLUAP1Q96AJ1 413 aa16.86■□□□□ 0.29
HLA-DOB-207ENST00000447394 FAM89AQ96GI7 184 aa16.86■□□□□ 0.29
HLA-DOB-207ENST00000447394 CWC25Q9NXE8 425 aaPredicted RBP16.86■□□□□ 0.29
HLA-DOB-207ENST00000447394 PLIN1O60240 522 aa16.85■□□□□ 0.29
HLA-DOB-207ENST00000447394 GTF2E1P29083 439 aaPredicted RBP16.85■□□□□ 0.29
HLA-DOB-207ENST00000447394 ST5P78524 1137 aa16.85■□□□□ 0.29
HLA-DOB-207ENST00000447394 TRIM28Q13263 835 aaKnown RBP16.85■□□□□ 0.29
HLA-DOB-207ENST00000447394 TPTE2Q6XPS3 522 aa16.85■□□□□ 0.29
HLA-DOB-207ENST00000447394 PPP1R42Q7Z4L9 355 aa16.85■□□□□ 0.29
HLA-DOB-207ENST00000447394 LINS1Q8NG48 757 aa16.85■□□□□ 0.29
HLA-DOB-207ENST00000447394 SYT17Q9BSW7 474 aa16.85■□□□□ 0.29
HLA-DOB-207ENST00000447394 NYXQ9GZU5 481 aa16.85■□□□□ 0.29
HLA-DOB-207ENST00000447394 A0A0G2JLW4 131 aa16.84■□□□□ 0.29
HLA-DOB-207ENST00000447394 HCLS1P14317 486 aaPredicted RBP16.84■□□□□ 0.29
HLA-DOB-207ENST00000447394 GCKRQ14397 625 aa16.84■□□□□ 0.29
HLA-DOB-207ENST00000447394 CCDC191Q8NCU4 936 aa16.84■□□□□ 0.29
HLA-DOB-207ENST00000447394 CD2APQ9Y5K6 639 aa16.84■□□□□ 0.29
HLA-DOB-207ENST00000447394 ABCC4O15439 1325 aa16.84■□□□□ 0.29
HLA-DOB-207ENST00000447394 DPEP1P16444 411 aa16.83■□□□□ 0.28
HLA-DOB-207ENST00000447394 RIC1Q4ADV7 1423 aa16.83■□□□□ 0.28
HLA-DOB-207ENST00000447394 ZKSCAN2Q63HK3 967 aa16.83■□□□□ 0.28
HLA-DOB-207ENST00000447394 ATF7IPQ6VMQ6 1270 aa16.83■□□□□ 0.28
HLA-DOB-207ENST00000447394 SH3TC1Q8TE82 1336 aa16.83■□□□□ 0.28
HLA-DOB-207ENST00000447394 API5Q9BZZ5 524 aaKnown RBP16.83■□□□□ 0.28
HLA-DOB-207ENST00000447394 SRCIN1Q9C0H9 1055 aa16.83■□□□□ 0.28
HLA-DOB-207ENST00000447394 SLX4Q8IY92 1834 aa16.82■□□□□ 0.28
HLA-DOB-207ENST00000447394 RLBP1P12271 317 aa16.82■□□□□ 0.28
HLA-DOB-207ENST00000447394 UBE3BQ7Z3V4 1068 aa16.82■□□□□ 0.28
HLA-DOB-207ENST00000447394 PCCAP05165 728 aaPredicted RBP16.81■□□□□ 0.28
HLA-DOB-207ENST00000447394 C2CD5Q86YS7 1000 aa16.81■□□□□ 0.28
HLA-DOB-207ENST00000447394 ZBTB38Q8NAP3 1195 aaPredicted RBP16.81■□□□□ 0.28
HLA-DOB-207ENST00000447394 ARHGAP45Q92619 1136 aa16.81■□□□□ 0.28
HLA-DOB-207ENST00000447394 BRIP1Q9BX63 1249 aa16.81■□□□□ 0.28
HLA-DOB-207ENST00000447394 ARFGEF1Q9Y6D6 1849 aa16.81■□□□□ 0.28
HLA-DOB-207ENST00000447394 RNF123Q5XPI4 1314 aa16.8■□□□□ 0.28
HLA-DOB-207ENST00000447394 IRS4O14654 1257 aaPredicted RBP16.8■□□□□ 0.28
HLA-DOB-207ENST00000447394 IPO8O15397 1037 aaKnown RBP16.8■□□□□ 0.28
HLA-DOB-207ENST00000447394 KCNA3P22001 575 aa16.8■□□□□ 0.28
HLA-DOB-207ENST00000447394 CASP7P55210 303 aa16.8■□□□□ 0.28
HLA-DOB-207ENST00000447394 SLC51AQ86UW1 340 aa16.8■□□□□ 0.28
HLA-DOB-207ENST00000447394 TMEM57Q8N5G2 664 aa16.8■□□□□ 0.28
HLA-DOB-207ENST00000447394 PANK1Q8TE04 598 aa16.8■□□□□ 0.28
HLA-DOB-207ENST00000447394 ALDH1L1O75891 902 aa16.79■□□□□ 0.28
HLA-DOB-207ENST00000447394 C20orf194Q5TEA3 1177 aa16.79■□□□□ 0.28
HLA-DOB-207ENST00000447394 H7C1W4 665 aa16.78■□□□□ 0.28
HLA-DOB-207ENST00000447394 GRM8O00222 908 aa16.78■□□□□ 0.28
HLA-DOB-207ENST00000447394 NBPF7P0C2Y1 421 aaPredicted RBP16.78■□□□□ 0.28
HLA-DOB-207ENST00000447394 PDE6BP35913 854 aa16.78■□□□□ 0.28
HLA-DOB-207ENST00000447394 TGFB2P61812 414 aa16.78■□□□□ 0.28
HLA-DOB-207ENST00000447394 SLC10A5Q5PT55 438 aa16.78■□□□□ 0.28
HLA-DOB-207ENST00000447394 CCDC85AQ96PX6 553 aaPredicted RBP16.78■□□□□ 0.28
HLA-DOB-207ENST00000447394 CDHR2Q9BYE9 1310 aa16.77■□□□□ 0.28
HLA-DOB-207ENST00000447394 CCT4P50991 539 aaKnown RBP16.77■□□□□ 0.28
HLA-DOB-207ENST00000447394 INTS3Q68E01 1043 aaKnown RBP16.77■□□□□ 0.28
HLA-DOB-207ENST00000447394 FTSJ3Q8IY81 847 aaKnown RBP16.77■□□□□ 0.28
HLA-DOB-207ENST00000447394 PELP1Q8IZL8 1130 aaKnown RBP16.77■□□□□ 0.28
HLA-DOB-207ENST00000447394 C9orf78Q9NZ63 289 aaPredicted RBP16.77■□□□□ 0.28
HLA-DOB-207ENST00000447394 GOLGB1Q14789 3259 aaKnown RBP16.77■□□□□ 0.27
HLA-DOB-207ENST00000447394 KLRG2A4D1S0 409 aaPredicted RBP16.76■□□□□ 0.27
HLA-DOB-207ENST00000447394 H0YIN7 160 aa16.76■□□□□ 0.27
HLA-DOB-207ENST00000447394 SRGNP10124 158 aa16.76■□□□□ 0.27
HLA-DOB-207ENST00000447394 CRY2Q49AN0 593 aa16.76■□□□□ 0.27
HLA-DOB-207ENST00000447394 EPHA10Q5JZY3 1008 aa16.76■□□□□ 0.27
HLA-DOB-207ENST00000447394 DZIP1LQ8IYY4 767 aaKnown RBP16.76■□□□□ 0.27
HLA-DOB-207ENST00000447394 ZNF622Q969S3 477 aaKnown RBP eCLIP16.76■□□□□ 0.27
HLA-DOB-207ENST00000447394 SUCLG2Q96I99 432 aa16.76■□□□□ 0.27
HLA-DOB-207ENST00000447394 MEIS3Q99687 375 aa16.76■□□□□ 0.27
HLA-DOB-207ENST00000447394 USP44Q9H0E7 712 aa16.76■□□□□ 0.27
HLA-DOB-207ENST00000447394 A0A1B0GUL6 1792 aa16.75■□□□□ 0.27
HLA-DOB-207ENST00000447394 RRP1P56182 461 aaKnown RBP16.75■□□□□ 0.27
HLA-DOB-207ENST00000447394 KAZALD1Q96I82 304 aa16.75■□□□□ 0.27
HLA-DOB-207ENST00000447394 NLRP3Q96P20 1036 aa16.75■□□□□ 0.27
HLA-DOB-207ENST00000447394 ZNF219Q9P2Y4 722 aaPredicted RBP16.75■□□□□ 0.27
HLA-DOB-207ENST00000447394 LRRC37AA6NMS7 1700 aa16.75■□□□□ 0.27
HLA-DOB-207ENST00000447394 UTYO14607 1347 aa16.74■□□□□ 0.27
HLA-DOB-207ENST00000447394 PDE8AO60658 829 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms