RNA–Protein interactions for RNA: ENST00000446836.5

CCDC12-203, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-203ENST00000446836 PDE6BP35913 854 aa13.82□□□□□ -0.2
CCDC12-203ENST00000446836 SUSD4Q5VX71 490 aa13.82□□□□□ -0.2
CCDC12-203ENST00000446836 ATP5J2-PTCD1G3V325 749 aa13.81□□□□□ -0.2
CCDC12-203ENST00000446836 SYT17Q9BSW7 474 aa13.81□□□□□ -0.2
CCDC12-203ENST00000446836 TRMT112Q9UI30 125 aaKnown RBP13.81□□□□□ -0.2
CCDC12-203ENST00000446836 NOB1Q9ULX3 412 aaKnown RBP13.81□□□□□ -0.2
CCDC12-203ENST00000446836 SH3TC1Q8TE82 1336 aa13.81□□□□□ -0.2
CCDC12-203ENST00000446836 NEURL1BA8MQ27 555 aa13.8□□□□□ -0.2
CCDC12-203ENST00000446836 ALDH1L1O75891 902 aa13.8□□□□□ -0.2
CCDC12-203ENST00000446836 IGKV5-2P06315 115 aa13.8□□□□□ -0.2
CCDC12-203ENST00000446836 SLC10A5Q5PT55 438 aa13.8□□□□□ -0.2
CCDC12-203ENST00000446836 BEND3Q5T5X7 828 aa13.8□□□□□ -0.2
CCDC12-203ENST00000446836 KLHL34Q8N239 644 aa13.8□□□□□ -0.2
CCDC12-203ENST00000446836 ZBTB38Q8NAP3 1195 aaPredicted RBP13.8□□□□□ -0.2
CCDC12-203ENST00000446836 RCAN3Q9UKA8 241 aa13.8□□□□□ -0.2
CCDC12-203ENST00000446836 SRCAPQ6ZRS2 3230 aa13.8□□□□□ -0.2
CCDC12-203ENST00000446836 FAM177BA6PVY3 158 aa13.79□□□□□ -0.2
CCDC12-203ENST00000446836 F6X3S4 739 aa13.79□□□□□ -0.2
CCDC12-203ENST00000446836 BCAR3O75815 825 aa13.79□□□□□ -0.2
CCDC12-203ENST00000446836 PCCAP05165 728 aaPredicted RBP13.79□□□□□ -0.2
CCDC12-203ENST00000446836 ZKSCAN2Q63HK3 967 aa13.79□□□□□ -0.2
CCDC12-203ENST00000446836 SLC4A10Q6U841 1118 aa13.79□□□□□ -0.2
CCDC12-203ENST00000446836 ATF7IPQ6VMQ6 1270 aa13.79□□□□□ -0.2
CCDC12-203ENST00000446836 SRCIN1Q9C0H9 1055 aa13.79□□□□□ -0.2
CCDC12-203ENST00000446836 KLRG2A4D1S0 409 aaPredicted RBP13.78□□□□□ -0.2
CCDC12-203ENST00000446836 H0YIN7 160 aa13.78□□□□□ -0.2
CCDC12-203ENST00000446836 MS4A1P11836 297 aa13.78□□□□□ -0.2
CCDC12-203ENST00000446836 CCT4P50991 539 aaKnown RBP13.78□□□□□ -0.2
CCDC12-203ENST00000446836 GCKRQ14397 625 aa13.78□□□□□ -0.2
CCDC12-203ENST00000446836 ERFEQ4G0M1 354 aa13.78□□□□□ -0.2
CCDC12-203ENST00000446836 NUTM1Q86Y26 1132 aa13.78□□□□□ -0.2
CCDC12-203ENST00000446836 N4BP2Q86UW6 1770 aaPredicted RBP13.78□□□□□ -0.2
CCDC12-203ENST00000446836 ANKRD31Q8N7Z5 1873 aa13.78□□□□□ -0.2
CCDC12-203ENST00000446836 CWF19L2Q2TBE0 894 aaKnown RBP13.77□□□□□ -0.21
CCDC12-203ENST00000446836 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.77□□□□□ -0.21
CCDC12-203ENST00000446836 FRAT1Q92837 279 aaPredicted RBP13.77□□□□□ -0.21
CCDC12-203ENST00000446836 NLRP3Q96P20 1036 aa13.77□□□□□ -0.21
CCDC12-203ENST00000446836 CDHR2Q9BYE9 1310 aa13.77□□□□□ -0.21
CCDC12-203ENST00000446836 LAMB2P55268 1798 aa13.76□□□□□ -0.21
CCDC12-203ENST00000446836 KIAA1551Q9HCM1 1747 aa13.76□□□□□ -0.21
CCDC12-203ENST00000446836 ABCC12Q96J65 1359 aa13.76□□□□□ -0.21
CCDC12-203ENST00000446836 ABCC4O15439 1325 aa13.76□□□□□ -0.21
CCDC12-203ENST00000446836 TRIM27P14373 513 aa13.76□□□□□ -0.21
CCDC12-203ENST00000446836 CRY2Q49AN0 593 aa13.76□□□□□ -0.21
CCDC12-203ENST00000446836 C2CD5Q86YS7 1000 aa13.76□□□□□ -0.21
CCDC12-203ENST00000446836 FAM89AQ96GI7 184 aa13.76□□□□□ -0.21
CCDC12-203ENST00000446836 DLEC1Q9Y238 1755 aa13.76□□□□□ -0.21
CCDC12-203ENST00000446836 H7C1W4 665 aa13.75□□□□□ -0.21
CCDC12-203ENST00000446836 GRM8O00222 908 aa13.75□□□□□ -0.21
CCDC12-203ENST00000446836 IRS4O14654 1257 aaPredicted RBP13.75□□□□□ -0.21
CCDC12-203ENST00000446836 DPEP1P16444 411 aa13.75□□□□□ -0.21
CCDC12-203ENST00000446836 INTS3Q68E01 1043 aaKnown RBP13.75□□□□□ -0.21
CCDC12-203ENST00000446836 STYK1Q6J9G0 422 aa13.75□□□□□ -0.21
CCDC12-203ENST00000446836 NLGN2Q8NFZ4 835 aa13.75□□□□□ -0.21
CCDC12-203ENST00000446836 MASTLQ96GX5 879 aa13.75□□□□□ -0.21
CCDC12-203ENST00000446836 C9orf78Q9NZ63 289 aaPredicted RBP13.75□□□□□ -0.21
CCDC12-203ENST00000446836 PIM2Q9P1W9 311 aa13.75□□□□□ -0.21
CCDC12-203ENST00000446836 A0A0G2JLW4 131 aa13.74□□□□□ -0.21
CCDC12-203ENST00000446836 PDE8AO60658 829 aa13.74□□□□□ -0.21
CCDC12-203ENST00000446836 SRGNP10124 158 aa13.74□□□□□ -0.21
CCDC12-203ENST00000446836 NPR1P16066 1061 aa13.74□□□□□ -0.21
CCDC12-203ENST00000446836 FTSJ3Q8IY81 847 aaKnown RBP13.74□□□□□ -0.21
CCDC12-203ENST00000446836 CCDC24Q8N4L8 307 aa13.74□□□□□ -0.21
CCDC12-203ENST00000446836 CNKSR1Q969H4 720 aa13.74□□□□□ -0.21
CCDC12-203ENST00000446836 HDAC5Q9UQL6 1122 aa13.74□□□□□ -0.21
CCDC12-203ENST00000446836 DDX60Q8IY21 1712 aaKnown RBP13.73□□□□□ -0.21
CCDC12-203ENST00000446836 TNRC6CQ9HCJ0 1690 aaKnown RBP13.73□□□□□ -0.21
CCDC12-203ENST00000446836 UTYO14607 1347 aa13.73□□□□□ -0.21
CCDC12-203ENST00000446836 DCAF8L1A6NGE4 600 aa13.73□□□□□ -0.21
CCDC12-203ENST00000446836 ALDH1B1P30837 517 aa13.73□□□□□ -0.21
CCDC12-203ENST00000446836 HOXA10P31260 410 aaPredicted RBP13.73□□□□□ -0.21
CCDC12-203ENST00000446836 SF3B3Q15393 1217 aaKnown RBP13.73□□□□□ -0.21
CCDC12-203ENST00000446836 UBE3BQ7Z3V4 1068 aa13.73□□□□□ -0.21
CCDC12-203ENST00000446836 RPGRQ92834 1020 aaKnown RBP13.73□□□□□ -0.21
CCDC12-203ENST00000446836 PLA2G12BQ9BX93 195 aa13.73□□□□□ -0.21
CCDC12-203ENST00000446836 BRCA1P38398 1863 aaKnown RBP13.73□□□□□ -0.21
CCDC12-203ENST00000446836 COL11A2P13942 1736 aaPredicted RBP13.73□□□□□ -0.21
CCDC12-203ENST00000446836 HCLS1P14317 486 aaPredicted RBP13.72□□□□□ -0.21
CCDC12-203ENST00000446836 KCNA3P22001 575 aa13.72□□□□□ -0.21
CCDC12-203ENST00000446836 CHRNA5P30532 468 aa13.72□□□□□ -0.21
CCDC12-203ENST00000446836 CASP7P55210 303 aa13.72□□□□□ -0.21
CCDC12-203ENST00000446836 DALRD3Q5D0E6 543 aaKnown RBP13.72□□□□□ -0.21
CCDC12-203ENST00000446836 DZIP1LQ8IYY4 767 aaKnown RBP13.72□□□□□ -0.21
CCDC12-203ENST00000446836 RBM17Q96I25 401 aaKnown RBP13.72□□□□□ -0.21
CCDC12-203ENST00000446836 MYH3P11055 1940 aa13.71□□□□□ -0.21
CCDC12-203ENST00000446836 CCDC152Q4G0S7 254 aa13.71□□□□□ -0.21
CCDC12-203ENST00000446836 RTL5Q5HYW3 569 aaPredicted RBP13.71□□□□□ -0.21
CCDC12-203ENST00000446836 SYNE4Q8N205 404 aa13.71□□□□□ -0.21
CCDC12-203ENST00000446836 TTLL6Q8N841 843 aa13.71□□□□□ -0.21
CCDC12-203ENST00000446836 ZNF622Q969S3 477 aaKnown RBP eCLIP13.71□□□□□ -0.212e-8■□□□□ 11.3
CCDC12-203ENST00000446836 CRAMP1Q96RY5 1269 aa13.71□□□□□ -0.21
CCDC12-203ENST00000446836 CTSWP56202 376 aa13.7□□□□□ -0.22
CCDC12-203ENST00000446836 PDE3AQ14432 1141 aa13.7□□□□□ -0.22
CCDC12-203ENST00000446836 DDX46Q7L014 1031 aaKnown RBP13.7□□□□□ -0.22
CCDC12-203ENST00000446836 CLUAP1Q96AJ1 413 aa13.7□□□□□ -0.22
CCDC12-203ENST00000446836 USP44Q9H0E7 712 aa13.7□□□□□ -0.22
CCDC12-203ENST00000446836 RTL9Q8NET4 1388 aa13.7□□□□□ -0.22
CCDC12-203ENST00000446836 GRIN3BO60391 1043 aa13.69□□□□□ -0.22
CCDC12-203ENST00000446836 GNAI3P08754 354 aa13.69□□□□□ -0.22
CCDC12-203ENST00000446836 SOGA3Q5TF21 947 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms