RNA–Protein interactions for RNA: ENST00000446739.1

PHTF1-207, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 4

Gene PHTF1, Length 770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-207ENST00000446739 BRPF1P55201 1214 aaPredicted RBP23.22■■□□□ 1.31
PHTF1-207ENST00000446739 CCDC24Q8N4L8 307 aa23.22■■□□□ 1.31
PHTF1-207ENST00000446739 YTHDC1Q96MU7 727 aaKnown RBP23.22■■□□□ 1.31
PHTF1-207ENST00000446739 PDZRN3Q9UPQ7 1066 aa23.22■■□□□ 1.31
PHTF1-207ENST00000446739 PDE6BP35913 854 aa23.21■■□□□ 1.31
PHTF1-207ENST00000446739 CCDC191Q8NCU4 936 aa23.21■■□□□ 1.31
PHTF1-207ENST00000446739 RIC1Q4ADV7 1423 aa23.21■■□□□ 1.31
PHTF1-207ENST00000446739 NUTM1Q86Y26 1132 aa23.2■■□□□ 1.3
PHTF1-207ENST00000446739 TRMT112Q9UI30 125 aaKnown RBP23.2■■□□□ 1.3
PHTF1-207ENST00000446739 COL11A2P13942 1736 aaPredicted RBP23.19■■□□□ 1.3
PHTF1-207ENST00000446739 ABCC12Q96J65 1359 aa23.19■■□□□ 1.3
PHTF1-207ENST00000446739 SH3TC1Q8TE82 1336 aa23.19■■□□□ 1.3
PHTF1-207ENST00000446739 ERFEQ4G0M1 354 aa23.19■■□□□ 1.3
PHTF1-207ENST00000446739 CWC25Q9NXE8 425 aaPredicted RBP23.19■■□□□ 1.3
PHTF1-207ENST00000446739 KIF16BQ96L93 1317 aa23.18■■□□□ 1.3
PHTF1-207ENST00000446739 A0A0G2JLW4 131 aa23.18■■□□□ 1.3
PHTF1-207ENST00000446739 IGKV5-2P06315 115 aa23.18■■□□□ 1.3
PHTF1-207ENST00000446739 DPEP1P16444 411 aa23.18■■□□□ 1.3
PHTF1-207ENST00000446739 LINS1Q8NG48 757 aa23.18■■□□□ 1.3
PHTF1-207ENST00000446739 LAMB2P55268 1798 aa23.18■■□□□ 1.3
PHTF1-207ENST00000446739 TNRC6CQ9HCJ0 1690 aaKnown RBP23.18■■□□□ 1.3
PHTF1-207ENST00000446739 DDX60Q8IY21 1712 aaKnown RBP23.17■■□□□ 1.3
PHTF1-207ENST00000446739 F6X3S4 739 aa23.17■■□□□ 1.3
PHTF1-207ENST00000446739 NEURL1BA8MQ27 555 aa23.16■■□□□ 1.3
PHTF1-207ENST00000446739 H0YIN7 160 aa23.16■■□□□ 1.3
PHTF1-207ENST00000446739 CHRNA5P30532 468 aa23.16■■□□□ 1.3
PHTF1-207ENST00000446739 SLC10A5Q5PT55 438 aa23.16■■□□□ 1.3
PHTF1-207ENST00000446739 C2CD5Q86YS7 1000 aa23.16■■□□□ 1.3
PHTF1-207ENST00000446739 CACNA1SQ13698 1873 aa23.15■■□□□ 1.3
PHTF1-207ENST00000446739 ARFGEF1Q9Y6D6 1849 aa23.15■■□□□ 1.3
PHTF1-207ENST00000446739 KLRG2A4D1S0 409 aaPredicted RBP23.15■■□□□ 1.3
PHTF1-207ENST00000446739 PCCAP05165 728 aaPredicted RBP23.15■■□□□ 1.3
PHTF1-207ENST00000446739 KCNA3P22001 575 aa23.15■■□□□ 1.3
PHTF1-207ENST00000446739 CWF19L2Q2TBE0 894 aaKnown RBP23.15■■□□□ 1.3
PHTF1-207ENST00000446739 ZBTB38Q8NAP3 1195 aaPredicted RBP23.15■■□□□ 1.3
PHTF1-207ENST00000446739 NOB1Q9ULX3 412 aaKnown RBP23.15■■□□□ 1.3
PHTF1-207ENST00000446739 MYH3P11055 1940 aa23.15■■□□□ 1.3
PHTF1-207ENST00000446739 BEND3Q5T5X7 828 aa23.14■■□□□ 1.29
PHTF1-207ENST00000446739 FAM89AQ96GI7 184 aa23.14■■□□□ 1.29
PHTF1-207ENST00000446739 PIM2Q9P1W9 311 aa23.14■■□□□ 1.29
PHTF1-207ENST00000446739 GOLGB1Q14789 3259 aaKnown RBP23.14■■□□□ 1.29
PHTF1-207ENST00000446739 DCAF8L1A6NGE4 600 aa23.13■■□□□ 1.29
PHTF1-207ENST00000446739 SRGNP10124 158 aa23.13■■□□□ 1.29
PHTF1-207ENST00000446739 SLC4A10Q6U841 1118 aa23.13■■□□□ 1.29
PHTF1-207ENST00000446739 ARHGAP45Q92619 1136 aa23.13■■□□□ 1.29
PHTF1-207ENST00000446739 NLRP3Q96P20 1036 aa23.13■■□□□ 1.29
PHTF1-207ENST00000446739 API5Q9BZZ5 524 aaKnown RBP23.13■■□□□ 1.29
PHTF1-207ENST00000446739 BCAR3O75815 825 aa23.12■■□□□ 1.29
PHTF1-207ENST00000446739 HSP90B1P14625 803 aaKnown RBP23.12■■□□□ 1.29
PHTF1-207ENST00000446739 GCKRQ14397 625 aa23.12■■□□□ 1.29
PHTF1-207ENST00000446739 SYNE4Q8N205 404 aa23.12■■□□□ 1.29
PHTF1-207ENST00000446739 MASTLQ96GX5 879 aa23.12■■□□□ 1.29
PHTF1-207ENST00000446739 IPO8O15397 1037 aaKnown RBP23.11■■□□□ 1.29
PHTF1-207ENST00000446739 ALDH1L1O75891 902 aa23.11■■□□□ 1.29
PHTF1-207ENST00000446739 CRY2Q49AN0 593 aa23.11■■□□□ 1.29
PHTF1-207ENST00000446739 STYK1Q6J9G0 422 aa23.11■■□□□ 1.29
PHTF1-207ENST00000446739 SRCIN1Q9C0H9 1055 aa23.11■■□□□ 1.29
PHTF1-207ENST00000446739 IRS4O14654 1257 aaPredicted RBP23.1■■□□□ 1.29
PHTF1-207ENST00000446739 HCLS1P14317 486 aaPredicted RBP23.1■■□□□ 1.29
PHTF1-207ENST00000446739 NPR1P16066 1061 aa23.1■■□□□ 1.29
PHTF1-207ENST00000446739 GPR162Q16538 588 aa23.1■■□□□ 1.29
PHTF1-207ENST00000446739 RTL5Q5HYW3 569 aaPredicted RBP23.1■■□□□ 1.29
PHTF1-207ENST00000446739 PELP1Q8IZL8 1130 aaKnown RBP23.1■■□□□ 1.29
PHTF1-207ENST00000446739 ZNF622Q969S3 477 aaKnown RBP eCLIP23.1■■□□□ 1.29
PHTF1-207ENST00000446739 CDHR2Q9BYE9 1310 aa23.09■■□□□ 1.29
PHTF1-207ENST00000446739 DALRD3Q5D0E6 543 aaKnown RBP23.09■■□□□ 1.29
PHTF1-207ENST00000446739 SLX4Q8IY92 1834 aa23.08■■□□□ 1.29
PHTF1-207ENST00000446739 H7C1W4 665 aa23.08■■□□□ 1.29
PHTF1-207ENST00000446739 TTLL6Q8N841 843 aa23.08■■□□□ 1.29
PHTF1-207ENST00000446739 CNKSR1Q969H4 720 aa23.08■■□□□ 1.29
PHTF1-207ENST00000446739 WWC3Q9ULE0 1092 aa23.08■■□□□ 1.29
PHTF1-207ENST00000446739 BCS1LQ9Y276 419 aa23.08■■□□□ 1.29
PHTF1-207ENST00000446739 RPGRQ92834 1020 aaKnown RBP23.07■■□□□ 1.28
PHTF1-207ENST00000446739 FRAT1Q92837 279 aaPredicted RBP23.07■■□□□ 1.28
PHTF1-207ENST00000446739 YBX3P16989 372 aaKnown RBP eCLIP23.06■■□□□ 1.28
PHTF1-207ENST00000446739 ATF7IPQ6VMQ6 1270 aa23.06■■□□□ 1.28
PHTF1-207ENST00000446739 C3orf67Q6ZVT6 689 aa23.06■■□□□ 1.28
PHTF1-207ENST00000446739 UBE3BQ7Z3V4 1068 aa23.06■■□□□ 1.28
PHTF1-207ENST00000446739 RCAN3Q9UKA8 241 aa23.06■■□□□ 1.28
PHTF1-207ENST00000446739 GRIN3BO60391 1043 aa23.05■■□□□ 1.28
PHTF1-207ENST00000446739 PDE8AO60658 829 aa23.05■■□□□ 1.28
PHTF1-207ENST00000446739 ALDH1B1P30837 517 aa23.05■■□□□ 1.28
PHTF1-207ENST00000446739 HOXA10P31260 410 aaPredicted RBP23.05■■□□□ 1.28
PHTF1-207ENST00000446739 CCT4P50991 539 aaKnown RBP23.05■■□□□ 1.28
PHTF1-207ENST00000446739 ZKSCAN2Q63HK3 967 aa23.05■■□□□ 1.28
PHTF1-207ENST00000446739 JARID2Q92833 1246 aaPredicted RBP23.05■■□□□ 1.28
PHTF1-207ENST00000446739 RBM17Q96I25 401 aaKnown RBP23.05■■□□□ 1.28
PHTF1-207ENST00000446739 CHD4Q14839 1912 aa23.04■■□□□ 1.28
PHTF1-207ENST00000446739 GRM8O00222 908 aa23.04■■□□□ 1.28
PHTF1-207ENST00000446739 SF3B3Q15393 1217 aaKnown RBP23.04■■□□□ 1.28
PHTF1-207ENST00000446739 C9orf78Q9NZ63 289 aaPredicted RBP23.04■■□□□ 1.28
PHTF1-207ENST00000446739 TAF1P21675 1872 aa23.04■■□□□ 1.28
PHTF1-207ENST00000446739 ABCC4O15439 1325 aa23.04■■□□□ 1.28
PHTF1-207ENST00000446739 TRIM27P14373 513 aa23.03■■□□□ 1.28
PHTF1-207ENST00000446739 CASP7P55210 303 aa23.03■■□□□ 1.28
PHTF1-207ENST00000446739 CRAMP1Q96RY5 1269 aa23.03■■□□□ 1.28
PHTF1-207ENST00000446739 PRPF40BQ6NWY9 871 aaKnown RBP23.02■■□□□ 1.28
PHTF1-207ENST00000446739 PLA2G12BQ9BX93 195 aa23.02■■□□□ 1.28
PHTF1-207ENST00000446739 UTRNP46939 3433 aa23.02■■□□□ 1.28
PHTF1-207ENST00000446739 DDX46Q7L014 1031 aaKnown RBP23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms