RNA–Protein interactions for RNA: ENST00000446646.1

HDAC9-216, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-216ENST00000446646 VARS2Q5ST30 1063 aaKnown RBP9.91□□□□□ -0.82
HDAC9-216ENST00000446646 IFNL2Q8IZJ0 200 aa9.91□□□□□ -0.82
HDAC9-216ENST00000446646 CNTROBQ8N137 903 aa9.91□□□□□ -0.82
HDAC9-216ENST00000446646 CAPNS2Q96L46 248 aa9.91□□□□□ -0.82
HDAC9-216ENST00000446646 GPHNQ9NQX3 736 aaPredicted RBP9.91□□□□□ -0.82
HDAC9-216ENST00000446646 ABT1Q9ULW3 272 aaKnown RBP9.91□□□□□ -0.82
HDAC9-216ENST00000446646 CASP8AP2Q9UKL3 1982 aa9.91□□□□□ -0.82
HDAC9-216ENST00000446646 AFDNP55196 1824 aaKnown RBP9.91□□□□□ -0.82
HDAC9-216ENST00000446646 SERPINB2P05120 415 aa9.9□□□□□ -0.82
HDAC9-216ENST00000446646 ZNF622Q969S3 477 aaKnown RBP eCLIP9.9□□□□□ -0.82
HDAC9-216ENST00000446646 GPR101Q96P66 508 aaPredicted RBP9.9□□□□□ -0.82
HDAC9-216ENST00000446646 DLEC1Q9Y238 1755 aa9.9□□□□□ -0.82
HDAC9-216ENST00000446646 TONSLQ96HA7 1378 aa9.89□□□□□ -0.83
HDAC9-216ENST00000446646 THSD7BQ9C0I4 1608 aa9.89□□□□□ -0.83
HDAC9-216ENST00000446646 SOS1Q07889 1333 aaPredicted RBP9.89□□□□□ -0.83
HDAC9-216ENST00000446646 ADAMTSL1Q8N6G6 1762 aa9.89□□□□□ -0.83
HDAC9-216ENST00000446646 H0YIN7 160 aa9.89□□□□□ -0.83
HDAC9-216ENST00000446646 FOXK1P85037 733 aa9.89□□□□□ -0.83
HDAC9-216ENST00000446646 DGKZQ13574 1117 aa9.89□□□□□ -0.83
HDAC9-216ENST00000446646 PLPP6Q8IY26 295 aa9.89□□□□□ -0.83
HDAC9-216ENST00000446646 TAOK3Q9H2K8 898 aa9.89□□□□□ -0.83
HDAC9-216ENST00000446646 ZNF831Q5JPB2 1677 aa9.89□□□□□ -0.83
HDAC9-216ENST00000446646 RANBP2P49792 3224 aaKnown RBP9.88□□□□□ -0.83
HDAC9-216ENST00000446646 NRXN2Q9P2S2 1712 aa9.88□□□□□ -0.83
HDAC9-216ENST00000446646 ERVV-2B6SEH9 535 aa9.88□□□□□ -0.83
HDAC9-216ENST00000446646 TRAF5O00463 557 aa9.88□□□□□ -0.83
HDAC9-216ENST00000446646 PPM1GO15355 546 aaPredicted RBP9.88□□□□□ -0.83
HDAC9-216ENST00000446646 EPHX2P34913 555 aa9.88□□□□□ -0.83
HDAC9-216ENST00000446646 DSG2Q14126 1118 aa9.88□□□□□ -0.83
HDAC9-216ENST00000446646 PRPF38BQ5VTL8 546 aaKnown RBP9.88□□□□□ -0.83
HDAC9-216ENST00000446646 CST9Q5W186 159 aa9.88□□□□□ -0.83
HDAC9-216ENST00000446646 OLFM4Q6UX06 510 aa9.88□□□□□ -0.83
HDAC9-216ENST00000446646 BICDL1Q6ZP65 573 aa9.88□□□□□ -0.83
HDAC9-216ENST00000446646 DNAJC10Q8IXB1 793 aa9.88□□□□□ -0.83
HDAC9-216ENST00000446646 TESK2Q96S53 571 aa9.88□□□□□ -0.83
HDAC9-216ENST00000446646 ZIC5Q96T25 663 aa9.88□□□□□ -0.83
HDAC9-216ENST00000446646 DDX21Q9NR30 783 aaKnown RBP eCLIP9.88□□□□□ -0.83
HDAC9-216ENST00000446646 CENPFP49454 3210 aa9.88□□□□□ -0.83
HDAC9-216ENST00000446646 DICER1Q9UPY3 1922 aaKnown RBP9.88□□□□□ -0.83
HDAC9-216ENST00000446646 COL11A2P13942 1736 aaPredicted RBP9.87□□□□□ -0.83
HDAC9-216ENST00000446646 TJP1Q07157 1748 aa9.87□□□□□ -0.83
HDAC9-216ENST00000446646 FER1L6Q2WGJ9 1857 aa9.87□□□□□ -0.83
HDAC9-216ENST00000446646 RNF123Q5XPI4 1314 aa9.87□□□□□ -0.83
HDAC9-216ENST00000446646 IQCA1LA6NCM1 817 aa9.87□□□□□ -0.83
HDAC9-216ENST00000446646 ZPR1O75312 459 aa9.87□□□□□ -0.83
HDAC9-216ENST00000446646 NUDT7P0C024 238 aa9.87□□□□□ -0.83
HDAC9-216ENST00000446646 CARD11Q9BXL7 1154 aa9.87□□□□□ -0.83
HDAC9-216ENST00000446646 PCDHGA4Q9Y5G9 962 aa9.87□□□□□ -0.83
HDAC9-216ENST00000446646 HTTP42858 3142 aa9.87□□□□□ -0.83
HDAC9-216ENST00000446646 LTBP3Q9NS15 1303 aa9.86□□□□□ -0.83
HDAC9-216ENST00000446646 ANKRD31Q8N7Z5 1873 aa9.86□□□□□ -0.83
HDAC9-216ENST00000446646 NARFQ9UHQ1 456 aa9.86□□□□□ -0.83
HDAC9-216ENST00000446646 HACL1Q9UJ83 578 aa9.86□□□□□ -0.83
HDAC9-216ENST00000446646 ZBTB1Q9Y2K1 713 aa9.86□□□□□ -0.83
HDAC9-216ENST00000446646 SLX4Q8IY92 1834 aa9.85□□□□□ -0.83
HDAC9-216ENST00000446646 COL6A3P12111 3177 aa9.85□□□□□ -0.83
HDAC9-216ENST00000446646 CABP4P57796 275 aa9.85□□□□□ -0.83
HDAC9-216ENST00000446646 NFATC2IPQ8NCF5 419 aa9.85□□□□□ -0.83
HDAC9-216ENST00000446646 BEGAINQ9BUH8 593 aa9.85□□□□□ -0.83
HDAC9-216ENST00000446646 ZNF277Q9NRM2 450 aaPredicted RBP9.85□□□□□ -0.83
HDAC9-216ENST00000446646 CYP19A1P11511 503 aaPredicted RBP9.84□□□□□ -0.83
HDAC9-216ENST00000446646 TRIM26Q12899 539 aaPredicted RBP9.84□□□□□ -0.83
HDAC9-216ENST00000446646 NEUROD1Q13562 356 aa9.84□□□□□ -0.83
HDAC9-216ENST00000446646 TBC1D9BQ66K14 1250 aa9.84□□□□□ -0.83
HDAC9-216ENST00000446646 PRR5LQ6MZQ0 368 aa9.84□□□□□ -0.83
HDAC9-216ENST00000446646 PRPF40BQ6NWY9 871 aaKnown RBP9.84□□□□□ -0.83
HDAC9-216ENST00000446646 C7orf43Q8WVR3 580 aa9.84□□□□□ -0.83
HDAC9-216ENST00000446646 PUS7Q96PZ0 661 aaKnown RBP9.84□□□□□ -0.83
HDAC9-216ENST00000446646 KRTAP3-3Q9BYR6 98 aa9.84□□□□□ -0.83
HDAC9-216ENST00000446646 KRTAP3-2Q9BYR7 98 aa9.84□□□□□ -0.83
HDAC9-216ENST00000446646 CRISPLD2Q9H0B8 497 aa9.84□□□□□ -0.83
HDAC9-216ENST00000446646 COL15A1P39059 1388 aa9.84□□□□□ -0.83
HDAC9-216ENST00000446646 KIF24Q5T7B8 1368 aa9.84□□□□□ -0.83
HDAC9-216ENST00000446646 ZNF316A6NFI3 1004 aaPredicted RBP9.83□□□□□ -0.84
HDAC9-216ENST00000446646 EIF4A2Q14240 407 aaKnown RBP9.83□□□□□ -0.84
HDAC9-216ENST00000446646 SLC51AQ86UW1 340 aa9.83□□□□□ -0.84
HDAC9-216ENST00000446646 CARD14Q9BXL6 1004 aa9.83□□□□□ -0.84
HDAC9-216ENST00000446646 SCN4AP35499 1836 aa9.83□□□□□ -0.84
HDAC9-216ENST00000446646 WASHC2AQ641Q2 1341 aa9.82□□□□□ -0.84
HDAC9-216ENST00000446646 PDE4AP27815 886 aa9.82□□□□□ -0.84
HDAC9-216ENST00000446646 SLC39A6Q13433 755 aa9.82□□□□□ -0.84
HDAC9-216ENST00000446646 CIAPIN1Q6FI81 312 aa9.82□□□□□ -0.84
HDAC9-216ENST00000446646 ZNF530Q6P9A1 599 aaPredicted RBP9.82□□□□□ -0.84
HDAC9-216ENST00000446646 AEBP1Q8IUX7 1158 aa9.82□□□□□ -0.84
HDAC9-216ENST00000446646 TLL2Q9Y6L7 1015 aa9.82□□□□□ -0.84
HDAC9-216ENST00000446646 COL4A5P29400 1685 aa9.82□□□□□ -0.84
HDAC9-216ENST00000446646 ST20-MTHFSA0A0A6YYL1 179 aa9.81□□□□□ -0.84
HDAC9-216ENST00000446646 EPS15P42566 896 aa9.81□□□□□ -0.84
HDAC9-216ENST00000446646 ECE1P42892 770 aa9.81□□□□□ -0.84
HDAC9-216ENST00000446646 PPP1R15BQ5SWA1 713 aa9.81□□□□□ -0.84
HDAC9-216ENST00000446646 ERICH6Q7L0X2 663 aa9.81□□□□□ -0.84
HDAC9-216ENST00000446646 PTCD2Q8WV60 388 aaKnown RBP9.81□□□□□ -0.84
HDAC9-216ENST00000446646 BRIP1Q9BX63 1249 aa9.81□□□□□ -0.84
HDAC9-216ENST00000446646 CEP290O15078 2479 aa9.8□□□□□ -0.84
HDAC9-216ENST00000446646 LAMA3Q16787 3333 aa9.8□□□□□ -0.84
HDAC9-216ENST00000446646 SRGNP10124 158 aa9.8□□□□□ -0.84
HDAC9-216ENST00000446646 MAP2K2P36507 400 aa9.8□□□□□ -0.84
HDAC9-216ENST00000446646 MTHFSP49914 203 aa9.8□□□□□ -0.84
HDAC9-216ENST00000446646 DLK2Q6UY11 383 aa9.8□□□□□ -0.84
HDAC9-216ENST00000446646 SAPCD2Q86UD0 394 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms