RNA–Protein interactions for RNA: ENST00000446579.1

LINC00440-201, long intergenic non-protein coding RNA 440, humanhuman

TSL 5 BASIC

Gene LINC00440, Length 734 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00440-201ENST00000446579 TRIM11Q96F44 468 aa8.35□□□□□ -1.07
LINC00440-201ENST00000446579 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.34□□□□□ -1.07
LINC00440-201ENST00000446579 PSMA6P60900 246 aaKnown RBP8.34□□□□□ -1.07
LINC00440-201ENST00000446579 SH3PXD2AQ5TCZ1 1133 aa8.34□□□□□ -1.07
LINC00440-201ENST00000446579 TSPAN10Q9H1Z9 355 aaPredicted RBP8.34□□□□□ -1.07
LINC00440-201ENST00000446579 PATL2C9JE40 543 aaKnown RBP8.33□□□□□ -1.08
LINC00440-201ENST00000446579 EML1O00423 815 aa8.33□□□□□ -1.08
LINC00440-201ENST00000446579 SPATA31C1P0DKV0 1188 aa8.33□□□□□ -1.08
LINC00440-201ENST00000446579 SFSWAPQ12872 951 aaKnown RBP8.33□□□□□ -1.08
LINC00440-201ENST00000446579 GAS2L2Q8NHY3 880 aa8.33□□□□□ -1.08
LINC00440-201ENST00000446579 HINFPQ9BQA5 517 aa8.33□□□□□ -1.08
LINC00440-201ENST00000446579 HCN4Q9Y3Q4 1203 aa8.33□□□□□ -1.08
LINC00440-201ENST00000446579 SPDYE3A6NKU9 549 aa8.32□□□□□ -1.08
LINC00440-201ENST00000446579 GATA4P43694 442 aa8.32□□□□□ -1.08
LINC00440-201ENST00000446579 CDCA8Q53HL2 280 aa8.32□□□□□ -1.08
LINC00440-201ENST00000446579 PRRT3Q5FWE3 981 aa8.32□□□□□ -1.08
LINC00440-201ENST00000446579 FAM200AQ8TCP9 573 aa8.32□□□□□ -1.08
LINC00440-201ENST00000446579 CEP63Q96MT8 703 aa8.32□□□□□ -1.08
LINC00440-201ENST00000446579 SEMA6BQ9H3T3 888 aa8.32□□□□□ -1.08
LINC00440-201ENST00000446579 GPC6Q9Y625 555 aaPredicted RBP8.32□□□□□ -1.08
LINC00440-201ENST00000446579 PPP1R12BO60237 982 aaPredicted RBP8.31□□□□□ -1.08
LINC00440-201ENST00000446579 HIRAP54198 1017 aaPredicted RBP8.31□□□□□ -1.08
LINC00440-201ENST00000446579 NEUROD1Q13562 356 aa8.31□□□□□ -1.08
LINC00440-201ENST00000446579 RAB44Q7Z6P3 723 aaPredicted RBP8.31□□□□□ -1.08
LINC00440-201ENST00000446579 Q8N3U1 123 aa8.31□□□□□ -1.08
LINC00440-201ENST00000446579 STAG2Q8N3U4 1231 aa8.31□□□□□ -1.08
LINC00440-201ENST00000446579 SLC30A3Q99726 388 aa8.31□□□□□ -1.08
LINC00440-201ENST00000446579 ATAD2Q6PL18 1390 aa8.31□□□□□ -1.08
LINC00440-201ENST00000446579 M0R082 166 aa8.3□□□□□ -1.08
LINC00440-201ENST00000446579 SIN3BO75182 1162 aa8.3□□□□□ -1.08
LINC00440-201ENST00000446579 BRD1O95696 1058 aa8.3□□□□□ -1.08
LINC00440-201ENST00000446579 APBA3O96018 575 aa8.3□□□□□ -1.08
LINC00440-201ENST00000446579 SPEM2Q0P670 501 aa8.3□□□□□ -1.08
LINC00440-201ENST00000446579 ELOAQ14241 798 aaKnown RBP8.3□□□□□ -1.08
LINC00440-201ENST00000446579 C1orf53Q5VUE5 145 aa8.3□□□□□ -1.08
LINC00440-201ENST00000446579 POTEAQ6S8J7 498 aa8.3□□□□□ -1.08
LINC00440-201ENST00000446579 ZNF417Q8TAU3 575 aa8.3□□□□□ -1.08
LINC00440-201ENST00000446579 SCG3Q8WXD2 468 aaKnown RBP8.3□□□□□ -1.08
LINC00440-201ENST00000446579 HSH2DQ96JZ2 352 aa8.3□□□□□ -1.08
LINC00440-201ENST00000446579 ZNF587Q96SQ5 575 aaPredicted RBP8.3□□□□□ -1.08
LINC00440-201ENST00000446579 BRD7Q9NPI1 651 aa8.3□□□□□ -1.08
LINC00440-201ENST00000446579 C21orf2O43822 256 aa8.29□□□□□ -1.08
LINC00440-201ENST00000446579 ATG7O95352 703 aa8.29□□□□□ -1.08
LINC00440-201ENST00000446579 KCNA1Q09470 495 aa8.29□□□□□ -1.08
LINC00440-201ENST00000446579 PHACTR1Q9C0D0 580 aa8.29□□□□□ -1.08
LINC00440-201ENST00000446579 NOVA2Q9UNW9 492 aaKnown RBP8.29□□□□□ -1.08
LINC00440-201ENST00000446579 FAM229AH3BQW9 127 aa8.28□□□□□ -1.08
LINC00440-201ENST00000446579 TBC1D8BQ0IIM8 1120 aa8.28□□□□□ -1.08
LINC00440-201ENST00000446579 ANKIB1Q9P2G1 1089 aa8.28□□□□□ -1.08
LINC00440-201ENST00000446579 ADARB2-AS1A8MUL3 147 aa8.27□□□□□ -1.09
LINC00440-201ENST00000446579 IGFBP4P22692 258 aa8.27□□□□□ -1.09
LINC00440-201ENST00000446579 ADH7P40394 386 aa8.27□□□□□ -1.09
LINC00440-201ENST00000446579 TMCO4Q5TGY1 634 aa8.27□□□□□ -1.09
LINC00440-201ENST00000446579 C8orf86Q6ZUL3 223 aa8.27□□□□□ -1.09
LINC00440-201ENST00000446579 C7orf43Q8WVR3 580 aa8.27□□□□□ -1.09
LINC00440-201ENST00000446579 C2orf49Q9BVC5 232 aaPredicted RBP8.27□□□□□ -1.09
LINC00440-201ENST00000446579 ALBP02768 609 aa8.26□□□□□ -1.09
LINC00440-201ENST00000446579 TRIM28Q13263 835 aaKnown RBP8.26□□□□□ -1.09
LINC00440-201ENST00000446579 CHMP7Q8WUX9 453 aaPredicted RBP8.26□□□□□ -1.09
LINC00440-201ENST00000446579 TNFRSF25Q93038 417 aa8.26□□□□□ -1.09
LINC00440-201ENST00000446579 GZF1Q9H116 711 aaPredicted RBP8.26□□□□□ -1.09
LINC00440-201ENST00000446579 IGFLR1Q9H665 355 aa8.26□□□□□ -1.09
LINC00440-201ENST00000446579 KCNH4Q9UQ05 1017 aa8.26□□□□□ -1.09
LINC00440-201ENST00000446579 MICALL1Q8N3F8 863 aa8.25□□□□□ -1.09
LINC00440-201ENST00000446579 ZNF280CQ8ND82 737 aa8.25□□□□□ -1.09
LINC00440-201ENST00000446579 RGS22Q8NE09 1264 aa8.25□□□□□ -1.09
LINC00440-201ENST00000446579 BHMTQ93088 406 aa8.25□□□□□ -1.09
LINC00440-201ENST00000446579 SUSD3Q96L08 255 aa8.25□□□□□ -1.09
LINC00440-201ENST00000446579 TMEM88BA6NKF7 163 aa8.24□□□□□ -1.09
LINC00440-201ENST00000446579 WEE1P30291 646 aa8.24□□□□□ -1.09
LINC00440-201ENST00000446579 HIF1AQ16665 826 aa8.24□□□□□ -1.09
LINC00440-201ENST00000446579 SWI5Q1ZZU3 235 aa8.24□□□□□ -1.09
LINC00440-201ENST00000446579 ALDH16A1Q8IZ83 802 aa8.24□□□□□ -1.09
LINC00440-201ENST00000446579 NGLY1Q96IV0 654 aa8.24□□□□□ -1.09
LINC00440-201ENST00000446579 MDFIQ99750 246 aa8.24□□□□□ -1.09
LINC00440-201ENST00000446579 STARD13Q9Y3M8 1113 aa8.24□□□□□ -1.09
LINC00440-201ENST00000446579 FOXO3O43524 673 aa8.23□□□□□ -1.09
LINC00440-201ENST00000446579 LGR5O75473 907 aa8.23□□□□□ -1.09
LINC00440-201ENST00000446579 TYRO3Q06418 890 aa8.23□□□□□ -1.09
LINC00440-201ENST00000446579 ZMYM1Q5SVZ6 1142 aa8.23□□□□□ -1.09
LINC00440-201ENST00000446579 TRAPPC3LQ5T215 181 aa8.23□□□□□ -1.09
LINC00440-201ENST00000446579 UBE2OQ9C0C9 1292 aaKnown RBP8.23□□□□□ -1.09
LINC00440-201ENST00000446579 ZMIZ1Q9ULJ6 1067 aa8.23□□□□□ -1.09
LINC00440-201ENST00000446579 ITGB7P26010 798 aa8.22□□□□□ -1.09
LINC00440-201ENST00000446579 MFAP1P55081 439 aaKnown RBP8.22□□□□□ -1.09
LINC00440-201ENST00000446579 GRIK4Q16099 956 aa8.22□□□□□ -1.09
LINC00440-201ENST00000446579 NACC1Q96RE7 527 aa8.22□□□□□ -1.09
LINC00440-201ENST00000446579 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.22□□□□□ -1.09
LINC00440-201ENST00000446579 LILRB5O75023 590 aa8.21□□□□□ -1.1
LINC00440-201ENST00000446579 STK32AQ8WU08 396 aa8.21□□□□□ -1.1
LINC00440-201ENST00000446579 VTI1AQ96AJ9 217 aa8.21□□□□□ -1.1
LINC00440-201ENST00000446579 PRDM6Q9NQX0 595 aa8.21□□□□□ -1.1
LINC00440-201ENST00000446579 TPSG1Q9NRR2 321 aa8.21□□□□□ -1.1
LINC00440-201ENST00000446579 KCNQ4P56696 695 aa8.2□□□□□ -1.1
LINC00440-201ENST00000446579 COL9A3Q14050 684 aaPredicted RBP8.2□□□□□ -1.1
LINC00440-201ENST00000446579 RTN1Q16799 776 aa8.2□□□□□ -1.1
LINC00440-201ENST00000446579 RSPO4Q2I0M5 234 aaPredicted RBP8.2□□□□□ -1.1
LINC00440-201ENST00000446579 SCO2A0A1W2PP80 73 aa8.19□□□□□ -1.1
LINC00440-201ENST00000446579 NID1P14543 1247 aa8.19□□□□□ -1.1
LINC00440-201ENST00000446579 FAM69CQ0P6D2 419 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms