RNA–Protein interactions for RNA: ENST00000446553.2

CDCA3-203, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 646 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-203ENST00000446553 ERFEQ4G0M1 354 aa14.68□□□□□ -0.06
CDCA3-203ENST00000446553 COPS6Q7L5N1 327 aa14.68□□□□□ -0.06
CDCA3-203ENST00000446553 NUTM1Q86Y26 1132 aa14.68□□□□□ -0.06
CDCA3-203ENST00000446553 CHMP4AQ9BY43 222 aa14.68□□□□□ -0.06
CDCA3-203ENST00000446553 RRAGCQ9HB90 399 aa14.68□□□□□ -0.06
CDCA3-203ENST00000446553 DBF4Q9UBU7 674 aaPredicted RBP14.68□□□□□ -0.06
CDCA3-203ENST00000446553 WDR90Q96KV7 1748 aa14.68□□□□□ -0.06
CDCA3-203ENST00000446553 SNED1Q8TER0 1413 aa14.67□□□□□ -0.06
CDCA3-203ENST00000446553 APLP1P51693 650 aa14.67□□□□□ -0.06
CDCA3-203ENST00000446553 TCIRG1Q13488 830 aa14.67□□□□□ -0.06
CDCA3-203ENST00000446553 HDGFL1Q5TGJ6 251 aa14.67□□□□□ -0.06
CDCA3-203ENST00000446553 XAGE3Q8WTP9 111 aa14.67□□□□□ -0.06
CDCA3-203ENST00000446553 CRAMP1Q96RY5 1269 aa14.67□□□□□ -0.06
CDCA3-203ENST00000446553 UTP14AQ9BVJ6 771 aaKnown RBP14.67□□□□□ -0.06
CDCA3-203ENST00000446553 MBIPQ9NS73 344 aa14.67□□□□□ -0.06
CDCA3-203ENST00000446553 ZNF219Q9P2Y4 722 aaPredicted RBP14.67□□□□□ -0.06
CDCA3-203ENST00000446553 LAS1LQ9Y4W2 734 aaKnown RBP14.67□□□□□ -0.06
CDCA3-203ENST00000446553 ZNF316A6NFI3 1004 aaPredicted RBP14.66□□□□□ -0.06
CDCA3-203ENST00000446553 ANXA1P04083 346 aa14.66□□□□□ -0.06
CDCA3-203ENST00000446553 CCDC27Q2M243 656 aa14.66□□□□□ -0.06
CDCA3-203ENST00000446553 KRT24Q2M2I5 525 aa14.66□□□□□ -0.06
CDCA3-203ENST00000446553 PSMD1Q99460 953 aa14.66□□□□□ -0.06
CDCA3-203ENST00000446553 HYPKQ9NX55 129 aa14.66□□□□□ -0.06
CDCA3-203ENST00000446553 DUSP27Q5VZP5 1158 aa14.65□□□□□ -0.06
CDCA3-203ENST00000446553 NLRP10Q86W26 655 aa14.65□□□□□ -0.06
CDCA3-203ENST00000446553 PLBD2Q8NHP8 589 aa14.65□□□□□ -0.06
CDCA3-203ENST00000446553 RPGRQ92834 1020 aaKnown RBP14.65□□□□□ -0.06
CDCA3-203ENST00000446553 RBM17Q96I25 401 aaKnown RBP14.65□□□□□ -0.06
CDCA3-203ENST00000446553 NLRP3Q96P20 1036 aa14.65□□□□□ -0.06
CDCA3-203ENST00000446553 CHPF2Q9P2E5 772 aa14.65□□□□□ -0.06
CDCA3-203ENST00000446553 SMC1BQ8NDV3 1235 aa14.64□□□□□ -0.07
CDCA3-203ENST00000446553 POTECB2RU33 542 aa14.63□□□□□ -0.07
CDCA3-203ENST00000446553 AIMP1Q12904 312 aaKnown RBP14.63□□□□□ -0.07
CDCA3-203ENST00000446553 TRIM28Q13263 835 aaKnown RBP14.63□□□□□ -0.07
CDCA3-203ENST00000446553 ANKRD13DQ6ZTN6 518 aa14.63□□□□□ -0.07
CDCA3-203ENST00000446553 NECTIN2Q92692 538 aa14.63□□□□□ -0.07
CDCA3-203ENST00000446553 L3MBTL3Q96JM7 780 aaPredicted RBP14.63□□□□□ -0.07
CDCA3-203ENST00000446553 SH3TC1Q8TE82 1336 aa14.63□□□□□ -0.07
CDCA3-203ENST00000446553 VPS33BQ9H267 617 aa14.62□□□□□ -0.07
CDCA3-203ENST00000446553 SCN4AP35499 1836 aa14.62□□□□□ -0.07
CDCA3-203ENST00000446553 FZD9O00144 591 aa14.61□□□□□ -0.07
CDCA3-203ENST00000446553 ANP32CO43423 234 aa14.61□□□□□ -0.07
CDCA3-203ENST00000446553 IARSP41252 1262 aaKnown RBP14.61□□□□□ -0.07
CDCA3-203ENST00000446553 SYNE4Q8N205 404 aa14.61□□□□□ -0.07
CDCA3-203ENST00000446553 ISCA1Q9BUE6 129 aa14.61□□□□□ -0.07
CDCA3-203ENST00000446553 TRMT112Q9UI30 125 aaKnown RBP14.61□□□□□ -0.07
CDCA3-203ENST00000446553 IL16Q14005 1332 aa14.61□□□□□ -0.07
CDCA3-203ENST00000446553 IQCA1LA6NCM1 817 aa14.6□□□□□ -0.07
CDCA3-203ENST00000446553 PPEF1O14829 653 aaPredicted RBP14.6□□□□□ -0.07
CDCA3-203ENST00000446553 BBOX1O75936 387 aa14.6□□□□□ -0.07
CDCA3-203ENST00000446553 CCDC184Q52MB2 194 aa14.6□□□□□ -0.07
CDCA3-203ENST00000446553 OLFM4Q6UX06 510 aa14.6□□□□□ -0.07
CDCA3-203ENST00000446553 C3orf67Q6ZVT6 689 aa14.6□□□□□ -0.07
CDCA3-203ENST00000446553 ZNF277Q9NRM2 450 aaPredicted RBP14.6□□□□□ -0.07
CDCA3-203ENST00000446553 LAMB2P55268 1798 aa14.6□□□□□ -0.07
CDCA3-203ENST00000446553 DDNO94850 711 aaPredicted RBP14.59□□□□□ -0.07
CDCA3-203ENST00000446553 TMC4Q7Z404 712 aa14.59□□□□□ -0.07
CDCA3-203ENST00000446553 WWC1Q8IX03 1113 aa14.59□□□□□ -0.07
CDCA3-203ENST00000446553 DNAJC5GQ8N7S2 189 aa14.59□□□□□ -0.07
CDCA3-203ENST00000446553 TMX4Q9H1E5 349 aaPredicted RBP14.59□□□□□ -0.07
CDCA3-203ENST00000446553 ATP6V0A2Q9Y487 856 aa14.59□□□□□ -0.07
CDCA3-203ENST00000446553 GOLGA2Q08379 1002 aa14.58□□□□□ -0.08
CDCA3-203ENST00000446553 CCDC30Q5VVM6 783 aa14.58□□□□□ -0.08
CDCA3-203ENST00000446553 JDP2Q8WYK2 163 aa14.58□□□□□ -0.08
CDCA3-203ENST00000446553 MRS2Q9HD23 443 aa14.58□□□□□ -0.08
CDCA3-203ENST00000446553 ABCC4O15439 1325 aa14.58□□□□□ -0.08
CDCA3-203ENST00000446553 HSP90B1P14625 803 aaKnown RBP14.57□□□□□ -0.08
CDCA3-203ENST00000446553 SF3B3Q15393 1217 aaKnown RBP14.57□□□□□ -0.08
CDCA3-203ENST00000446553 DDX46Q7L014 1031 aaKnown RBP14.57□□□□□ -0.08
CDCA3-203ENST00000446553 SP8Q8IXZ3 490 aa14.57□□□□□ -0.08
CDCA3-203ENST00000446553 GPC2Q8N158 579 aa14.57□□□□□ -0.08
CDCA3-203ENST00000446553 C8orf58Q8NAV2 365 aa14.57□□□□□ -0.08
CDCA3-203ENST00000446553 RTFDC1Q9BY42 306 aaPredicted RBP14.57□□□□□ -0.08
CDCA3-203ENST00000446553 CACNA1FO60840 1977 aa14.56□□□□□ -0.08
CDCA3-203ENST00000446553 DDX60Q8IY21 1712 aaKnown RBP14.56□□□□□ -0.08
CDCA3-203ENST00000446553 HCLS1P14317 486 aaPredicted RBP14.56□□□□□ -0.08
CDCA3-203ENST00000446553 GRAPQ13588 217 aa14.56□□□□□ -0.08
CDCA3-203ENST00000446553 SUPT20HQ8NEM7 779 aa14.56□□□□□ -0.08
CDCA3-203ENST00000446553 GRAPLQ8TC17 118 aaPredicted RBP14.56□□□□□ -0.08
CDCA3-203ENST00000446553 DDX58O95786 925 aaKnown RBP14.55□□□□□ -0.08
CDCA3-203ENST00000446553 CHADLQ6NUI6 762 aa14.55□□□□□ -0.08
CDCA3-203ENST00000446553 RIC3Q7Z5B4 369 aa14.55□□□□□ -0.08
CDCA3-203ENST00000446553 CCDC191Q8NCU4 936 aa14.55□□□□□ -0.08
CDCA3-203ENST00000446553 TAF1DQ9H5J8 278 aaPredicted RBP14.55□□□□□ -0.08
CDCA3-203ENST00000446553 PHAXQ9H814 394 aaKnown RBP14.55□□□□□ -0.08
CDCA3-203ENST00000446553 ZNF541Q9H0D2 1346 aa14.55□□□□□ -0.08
CDCA3-203ENST00000446553 ELL2O00472 640 aaPredicted RBP14.54□□□□□ -0.08
CDCA3-203ENST00000446553 EIF6P56537 245 aaKnown RBP14.54□□□□□ -0.08
CDCA3-203ENST00000446553 LDHDQ86WU2 507 aa14.54□□□□□ -0.08
CDCA3-203ENST00000446553 WDR63Q8IWG1 891 aa14.54□□□□□ -0.08
CDCA3-203ENST00000446553 LARGE2Q8N3Y3 721 aa14.54□□□□□ -0.08
CDCA3-203ENST00000446553 ZBTB38Q8NAP3 1195 aaPredicted RBP14.54□□□□□ -0.08
CDCA3-203ENST00000446553 FAM89AQ96GI7 184 aa14.54□□□□□ -0.08
CDCA3-203ENST00000446553 LRRC37AA6NMS7 1700 aa14.53□□□□□ -0.08
CDCA3-203ENST00000446553 COL4A5P29400 1685 aa14.53□□□□□ -0.08
CDCA3-203ENST00000446553 ATP5J2-PTCD1G3V325 749 aa14.53□□□□□ -0.08
CDCA3-203ENST00000446553 PNMA8AQ86V59 439 aaPredicted RBP14.53□□□□□ -0.08
CDCA3-203ENST00000446553 TSPYL6Q8N831 410 aa14.53□□□□□ -0.08
CDCA3-203ENST00000446553 KLRG1Q96E93 195 aa14.53□□□□□ -0.08
CDCA3-203ENST00000446553 METTL22Q9BUU2 404 aaPredicted RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms