RNA–Protein interactions for RNA: ENST00000445998.1

UBQLN3-202, Transcript of ubiquilin 3, humanhuman

TSL 3

Gene UBQLN3, Length 817 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3-202ENST00000445998 FHDC1Q9C0D6 1143 aaPredicted RBP17.47■□□□□ 0.39
UBQLN3-202ENST00000445998 CWC25Q9NXE8 425 aaPredicted RBP17.47■□□□□ 0.39
UBQLN3-202ENST00000445998 TRMT112Q9UI30 125 aaKnown RBP17.47■□□□□ 0.39
UBQLN3-202ENST00000445998 SYT17Q9BSW7 474 aa17.46■□□□□ 0.39
UBQLN3-202ENST00000445998 RCAN3Q9UKA8 241 aa17.46■□□□□ 0.39
UBQLN3-202ENST00000445998 F6X3S4 739 aa17.45■□□□□ 0.38
UBQLN3-202ENST00000445998 BCAR3O75815 825 aa17.45■□□□□ 0.38
UBQLN3-202ENST00000445998 ALDH1L1O75891 902 aa17.45■□□□□ 0.38
UBQLN3-202ENST00000445998 NTSR2O95665 410 aa17.45■□□□□ 0.38
UBQLN3-202ENST00000445998 SLC4A10Q6U841 1118 aa17.45■□□□□ 0.38
UBQLN3-202ENST00000445998 ZBTB38Q8NAP3 1195 aaPredicted RBP17.45■□□□□ 0.38
UBQLN3-202ENST00000445998 C10orf71Q711Q0 1435 aa17.45■□□□□ 0.38
UBQLN3-202ENST00000445998 SH3TC1Q8TE82 1336 aa17.45■□□□□ 0.38
UBQLN3-202ENST00000445998 NEURL1BA8MQ27 555 aa17.44■□□□□ 0.38
UBQLN3-202ENST00000445998 SLC10A5Q5PT55 438 aa17.44■□□□□ 0.38
UBQLN3-202ENST00000445998 FRAT1Q92837 279 aaPredicted RBP17.44■□□□□ 0.38
UBQLN3-202ENST00000445998 SRCIN1Q9C0H9 1055 aa17.44■□□□□ 0.38
UBQLN3-202ENST00000445998 H0YIN7 160 aa17.43■□□□□ 0.38
UBQLN3-202ENST00000445998 PCCAP05165 728 aaPredicted RBP17.43■□□□□ 0.38
UBQLN3-202ENST00000445998 IGKV5-2P06315 115 aa17.43■□□□□ 0.38
UBQLN3-202ENST00000445998 MS4A1P11836 297 aa17.43■□□□□ 0.38
UBQLN3-202ENST00000445998 BEND3Q5T5X7 828 aa17.43■□□□□ 0.38
UBQLN3-202ENST00000445998 ZKSCAN2Q63HK3 967 aa17.43■□□□□ 0.38
UBQLN3-202ENST00000445998 ATF7IPQ6VMQ6 1270 aa17.43■□□□□ 0.38
UBQLN3-202ENST00000445998 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.43■□□□□ 0.38
UBQLN3-202ENST00000445998 RIC1Q4ADV7 1423 aa17.42■□□□□ 0.38
UBQLN3-202ENST00000445998 CCT4P50991 539 aaKnown RBP17.42■□□□□ 0.38
UBQLN3-202ENST00000445998 GCKRQ14397 625 aa17.42■□□□□ 0.38
UBQLN3-202ENST00000445998 ERFEQ4G0M1 354 aa17.42■□□□□ 0.38
UBQLN3-202ENST00000445998 NUTM1Q86Y26 1132 aa17.42■□□□□ 0.38
UBQLN3-202ENST00000445998 NLRP3Q96P20 1036 aa17.42■□□□□ 0.38
UBQLN3-202ENST00000445998 PXDNLA1KZ92 1463 aa17.42■□□□□ 0.38
UBQLN3-202ENST00000445998 CWF19L2Q2TBE0 894 aaKnown RBP17.41■□□□□ 0.38
UBQLN3-202ENST00000445998 FAM89AQ96GI7 184 aa17.41■□□□□ 0.38
UBQLN3-202ENST00000445998 ANKRD31Q8N7Z5 1873 aa17.41■□□□□ 0.38
UBQLN3-202ENST00000445998 KLRG2A4D1S0 409 aaPredicted RBP17.4■□□□□ 0.38
UBQLN3-202ENST00000445998 DCAF8L1A6NGE4 600 aa17.4■□□□□ 0.38
UBQLN3-202ENST00000445998 C9orf78Q9NZ63 289 aaPredicted RBP17.4■□□□□ 0.38
UBQLN3-202ENST00000445998 HDAC5Q9UQL6 1122 aa17.4■□□□□ 0.38
UBQLN3-202ENST00000445998 N4BP2Q86UW6 1770 aaPredicted RBP17.4■□□□□ 0.38
UBQLN3-202ENST00000445998 H7C1W4 665 aa17.39■□□□□ 0.37
UBQLN3-202ENST00000445998 IRS4O14654 1257 aaPredicted RBP17.39■□□□□ 0.37
UBQLN3-202ENST00000445998 C2CD5Q86YS7 1000 aa17.39■□□□□ 0.37
UBQLN3-202ENST00000445998 PIM2Q9P1W9 311 aa17.39■□□□□ 0.37
UBQLN3-202ENST00000445998 CDHR2Q9BYE9 1310 aa17.39■□□□□ 0.37
UBQLN3-202ENST00000445998 MYH3P11055 1940 aa17.39■□□□□ 0.37
UBQLN3-202ENST00000445998 A0A0G2JLW4 131 aa17.38■□□□□ 0.37
UBQLN3-202ENST00000445998 PDE8AO60658 829 aa17.38■□□□□ 0.37
UBQLN3-202ENST00000445998 CCDC24Q8N4L8 307 aa17.38■□□□□ 0.37
UBQLN3-202ENST00000445998 MASTLQ96GX5 879 aa17.38■□□□□ 0.37
UBQLN3-202ENST00000445998 DLEC1Q9Y238 1755 aa17.38■□□□□ 0.37
UBQLN3-202ENST00000445998 GRM8O00222 908 aa17.37■□□□□ 0.37
UBQLN3-202ENST00000445998 SRGNP10124 158 aa17.37■□□□□ 0.37
UBQLN3-202ENST00000445998 TRIM27P14373 513 aa17.37■□□□□ 0.37
UBQLN3-202ENST00000445998 NPR1P16066 1061 aa17.37■□□□□ 0.37
UBQLN3-202ENST00000445998 DPEP1P16444 411 aa17.37■□□□□ 0.37
UBQLN3-202ENST00000445998 ALDH1B1P30837 517 aa17.37■□□□□ 0.37
UBQLN3-202ENST00000445998 INTS3Q68E01 1043 aaKnown RBP17.37■□□□□ 0.37
UBQLN3-202ENST00000445998 STYK1Q6J9G0 422 aa17.37■□□□□ 0.37
UBQLN3-202ENST00000445998 FTSJ3Q8IY81 847 aaKnown RBP17.37■□□□□ 0.37
UBQLN3-202ENST00000445998 DZIP1LQ8IYY4 767 aaKnown RBP17.37■□□□□ 0.37
UBQLN3-202ENST00000445998 NLGN2Q8NFZ4 835 aa17.37■□□□□ 0.37
UBQLN3-202ENST00000445998 RPGRQ92834 1020 aaKnown RBP17.37■□□□□ 0.37
UBQLN3-202ENST00000445998 CNKSR1Q969H4 720 aa17.37■□□□□ 0.37
UBQLN3-202ENST00000445998 LAMB2P55268 1798 aa17.37■□□□□ 0.37
UBQLN3-202ENST00000445998 DDX60Q8IY21 1712 aaKnown RBP17.36■□□□□ 0.37
UBQLN3-202ENST00000445998 HCLS1P14317 486 aaPredicted RBP17.36■□□□□ 0.37
UBQLN3-202ENST00000445998 CRY2Q49AN0 593 aa17.36■□□□□ 0.37
UBQLN3-202ENST00000445998 RTL5Q5HYW3 569 aaPredicted RBP17.36■□□□□ 0.37
UBQLN3-202ENST00000445998 UBE3BQ7Z3V4 1068 aa17.36■□□□□ 0.37
UBQLN3-202ENST00000445998 RBM17Q96I25 401 aaKnown RBP17.36■□□□□ 0.37
UBQLN3-202ENST00000445998 ABCC4O15439 1325 aa17.36■□□□□ 0.37
UBQLN3-202ENST00000445998 KIAA1551Q9HCM1 1747 aa17.35■□□□□ 0.37
UBQLN3-202ENST00000445998 BRCA1P38398 1863 aaKnown RBP17.35■□□□□ 0.37
UBQLN3-202ENST00000445998 KCNA3P22001 575 aa17.35■□□□□ 0.37
UBQLN3-202ENST00000445998 CHRNA5P30532 468 aa17.35■□□□□ 0.37
UBQLN3-202ENST00000445998 SF3B3Q15393 1217 aaKnown RBP17.35■□□□□ 0.37
UBQLN3-202ENST00000445998 SYNE4Q8N205 404 aa17.35■□□□□ 0.37
UBQLN3-202ENST00000445998 TTLL6Q8N841 843 aa17.35■□□□□ 0.37
UBQLN3-202ENST00000445998 ZNF622Q969S3 477 aaKnown RBP eCLIP17.35■□□□□ 0.37
UBQLN3-202ENST00000445998 PLA2G12BQ9BX93 195 aa17.35■□□□□ 0.37
UBQLN3-202ENST00000445998 ABCC12Q96J65 1359 aa17.35■□□□□ 0.37
UBQLN3-202ENST00000445998 UTYO14607 1347 aa17.34■□□□□ 0.37
UBQLN3-202ENST00000445998 HOXA10P31260 410 aaPredicted RBP17.34■□□□□ 0.37
UBQLN3-202ENST00000445998 CLUAP1Q96AJ1 413 aa17.34■□□□□ 0.37
UBQLN3-202ENST00000445998 CCDC152Q4G0S7 254 aa17.33■□□□□ 0.36
UBQLN3-202ENST00000445998 DALRD3Q5D0E6 543 aaKnown RBP17.33■□□□□ 0.36
UBQLN3-202ENST00000445998 DDX46Q7L014 1031 aaKnown RBP17.33■□□□□ 0.36
UBQLN3-202ENST00000445998 CRAMP1Q96RY5 1269 aa17.33■□□□□ 0.36
UBQLN3-202ENST00000445998 GNAI3P08754 354 aa17.32■□□□□ 0.36
UBQLN3-202ENST00000445998 CASP7P55210 303 aa17.32■□□□□ 0.36
UBQLN3-202ENST00000445998 JARID2Q92833 1246 aaPredicted RBP17.32■□□□□ 0.36
UBQLN3-202ENST00000445998 USP44Q9H0E7 712 aa17.32■□□□□ 0.36
UBQLN3-202ENST00000445998 CHMP4BQ9H444 224 aaKnown RBP17.32■□□□□ 0.36
UBQLN3-202ENST00000445998 ARFGEF1Q9Y6D6 1849 aa17.31■□□□□ 0.36
UBQLN3-202ENST00000445998 UBTFL1P0CB47 393 aaPredicted RBP17.31■□□□□ 0.36
UBQLN3-202ENST00000445998 CTSWP56202 376 aa17.31■□□□□ 0.36
UBQLN3-202ENST00000445998 PDE3AQ14432 1141 aa17.31■□□□□ 0.36
UBQLN3-202ENST00000445998 GPR162Q16538 588 aa17.31■□□□□ 0.36
UBQLN3-202ENST00000445998 TNRC6CQ9HCJ0 1690 aaKnown RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms