RNA–Protein interactions for RNA: ENST00000445497.1

UBBP3-201, Transcript of ubiquitin B pseudogene 3, humanhuman

BASIC

Gene UBBP3, Length 241 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP3-201ENST00000445497 CDV3Q9UKY7 258 aaKnown RBP3.34□□□□□ -1.87
UBBP3-201ENST00000445497 FAM196BA6NMK8 535 aa3.33□□□□□ -1.88
UBBP3-201ENST00000445497 PITPNM1O00562 1244 aa3.33□□□□□ -1.88
UBBP3-201ENST00000445497 CTAGE5O15320 804 aa3.33□□□□□ -1.88
UBBP3-201ENST00000445497 ICMTO60725 284 aa3.33□□□□□ -1.88
UBBP3-201ENST00000445497 PRPF40AO75400 957 aaKnown RBP3.33□□□□□ -1.88
UBBP3-201ENST00000445497 AP1G2O75843 785 aa3.33□□□□□ -1.88
UBBP3-201ENST00000445497 TPPPO94811 219 aa3.33□□□□□ -1.88
UBBP3-201ENST00000445497 TRIM37O94972 964 aa3.33□□□□□ -1.88
UBBP3-201ENST00000445497 BAG2O95816 211 aa3.33□□□□□ -1.88
UBBP3-201ENST00000445497 FGRP09769 529 aa3.33□□□□□ -1.88
UBBP3-201ENST00000445497 RRM1P23921 792 aa3.33□□□□□ -1.88
UBBP3-201ENST00000445497 PMLP29590 882 aa3.33□□□□□ -1.88
UBBP3-201ENST00000445497 KIF5BP33176 963 aa3.33□□□□□ -1.88
UBBP3-201ENST00000445497 SEC13P55735 322 aa3.33□□□□□ -1.88
UBBP3-201ENST00000445497 VAC14Q08AM6 782 aa3.33□□□□□ -1.88
UBBP3-201ENST00000445497 IFT88Q13099 833 aa3.33□□□□□ -1.88
UBBP3-201ENST00000445497 SERINC3Q13530 473 aa3.33□□□□□ -1.88
UBBP3-201ENST00000445497 SEPT7Q16181 437 aaKnown RBP3.33□□□□□ -1.88
UBBP3-201ENST00000445497 SWI5Q1ZZU3 235 aa3.33□□□□□ -1.88
UBBP3-201ENST00000445497 SLC4A8Q2Y0W8 1093 aa3.33□□□□□ -1.88
UBBP3-201ENST00000445497 ZC3H12AQ5D1E8 599 aaKnown RBP3.33□□□□□ -1.88
UBBP3-201ENST00000445497 WDR45BQ5MNZ6 344 aa3.33□□□□□ -1.88
UBBP3-201ENST00000445497 C10orf62Q5T681 223 aaPredicted RBP3.33□□□□□ -1.88
UBBP3-201ENST00000445497 LDLRAD1Q5T700 205 aa3.33□□□□□ -1.88
UBBP3-201ENST00000445497 KANK4Q5T7N3 995 aaPredicted RBP3.33□□□□□ -1.88
UBBP3-201ENST00000445497 ISM2Q6H9L7 571 aa3.33□□□□□ -1.88
UBBP3-201ENST00000445497 CTR9Q6PD62 1173 aa3.33□□□□□ -1.88
UBBP3-201ENST00000445497 TMC4Q7Z404 712 aa3.33□□□□□ -1.88
UBBP3-201ENST00000445497 ZNF354CQ86Y25 554 aa3.33□□□□□ -1.88
UBBP3-201ENST00000445497 MCF2L2Q86YR7 1114 aa3.33□□□□□ -1.88
UBBP3-201ENST00000445497 ERC1Q8IUD2 1116 aa3.33□□□□□ -1.88
UBBP3-201ENST00000445497 CCAR2Q8N163 923 aaKnown RBP3.33□□□□□ -1.88
UBBP3-201ENST00000445497 ZNF710Q8N1W2 664 aa3.33□□□□□ -1.88
UBBP3-201ENST00000445497 TEX9Q8N6V9 391 aa3.33□□□□□ -1.88
UBBP3-201ENST00000445497 ENAHQ8N8S7 591 aaPredicted RBP3.33□□□□□ -1.88
UBBP3-201ENST00000445497 NFATC2IPQ8NCF5 419 aa3.33□□□□□ -1.88
UBBP3-201ENST00000445497 ACRBPQ8NEB7 543 aa3.33□□□□□ -1.88
UBBP3-201ENST00000445497 FBXO22Q8NEZ5 403 aa3.33□□□□□ -1.88
UBBP3-201ENST00000445497 ZNF496Q96IT1 587 aaPredicted RBP3.33□□□□□ -1.88
UBBP3-201ENST00000445497 TBATAQ96M53 351 aa3.33□□□□□ -1.88
UBBP3-201ENST00000445497 SRPK1Q96SB4 655 aaKnown RBP3.33□□□□□ -1.88
UBBP3-201ENST00000445497 FEZ1Q99689 392 aa3.33□□□□□ -1.88
UBBP3-201ENST00000445497 C22orf23Q9BZE7 217 aa3.33□□□□□ -1.88
UBBP3-201ENST00000445497 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.33□□□□□ -1.88
UBBP3-201ENST00000445497 PPCSQ9HAB8 311 aa3.33□□□□□ -1.88
UBBP3-201ENST00000445497 CYLDQ9NQC7 956 aa3.33□□□□□ -1.88
UBBP3-201ENST00000445497 ENAMQ9NRM1 1142 aa3.33□□□□□ -1.88
UBBP3-201ENST00000445497 FAM217BQ9NTX9 383 aaPredicted RBP3.33□□□□□ -1.88
UBBP3-201ENST00000445497 EPS15L1Q9UBC2 864 aa3.33□□□□□ -1.88
UBBP3-201ENST00000445497 VTI1BQ9UEU0 232 aa3.33□□□□□ -1.88
UBBP3-201ENST00000445497 XPO7Q9UIA9 1087 aaKnown RBP3.33□□□□□ -1.88
UBBP3-201ENST00000445497 SLC45A1Q9Y2W3 748 aa3.33□□□□□ -1.88
UBBP3-201ENST00000445497 WASHC2AQ641Q2 1341 aa3.33□□□□□ -1.88
UBBP3-201ENST00000445497 GRXCR2A6NFK2 248 aa3.32□□□□□ -1.88
UBBP3-201ENST00000445497 TMEM110-MUSTN1A8MSY1 372 aa3.32□□□□□ -1.88
UBBP3-201ENST00000445497 FAM25EA8MYX2 175 aa3.32□□□□□ -1.88
UBBP3-201ENST00000445497 C21orf2O43822 256 aa3.32□□□□□ -1.88
UBBP3-201ENST00000445497 IPO7O95373 1038 aaKnown RBP3.32□□□□□ -1.88
UBBP3-201ENST00000445497 USP17L8P0C7I0 530 aa3.32□□□□□ -1.88
UBBP3-201ENST00000445497 IDEP14735 1019 aa3.32□□□□□ -1.88
UBBP3-201ENST00000445497 FECHP22830 423 aa3.32□□□□□ -1.88
UBBP3-201ENST00000445497 TSPAN7P41732 249 aa3.32□□□□□ -1.88
UBBP3-201ENST00000445497 TRPC1P48995 793 aa3.32□□□□□ -1.88
UBBP3-201ENST00000445497 NUCB1Q02818 461 aa3.32□□□□□ -1.88
UBBP3-201ENST00000445497 STK3Q13188 491 aa3.32□□□□□ -1.88
UBBP3-201ENST00000445497 PARP10Q53GL7 1025 aa3.32□□□□□ -1.88
UBBP3-201ENST00000445497 SPECC1Q5M775 1068 aa3.32□□□□□ -1.88
UBBP3-201ENST00000445497 DNTTIP2Q5QJE6 756 aaKnown RBP3.32□□□□□ -1.88
UBBP3-201ENST00000445497 PPP1R15BQ5SWA1 713 aa3.32□□□□□ -1.88
UBBP3-201ENST00000445497 RC3H1Q5TC82 1133 aaKnown RBP3.32□□□□□ -1.88
UBBP3-201ENST00000445497 LARP1Q6PKG0 1096 aaKnown RBP3.32□□□□□ -1.88
UBBP3-201ENST00000445497 KRT26Q7Z3Y9 468 aa3.32□□□□□ -1.88
UBBP3-201ENST00000445497 MTERF4Q7Z6M4 381 aaKnown RBP3.32□□□□□ -1.88
UBBP3-201ENST00000445497 KIAA0907Q7Z7F0 614 aaPredicted RBP3.32□□□□□ -1.88
UBBP3-201ENST00000445497 RASSF3Q86WH2 238 aa3.32□□□□□ -1.88
UBBP3-201ENST00000445497 DZIP3Q86Y13 1208 aaKnown RBP3.32□□□□□ -1.88
UBBP3-201ENST00000445497 MPNDQ8N594 471 aa3.32□□□□□ -1.88
UBBP3-201ENST00000445497 ANKRD42Q8N9B4 389 aa3.32□□□□□ -1.88
UBBP3-201ENST00000445497 CCDC191Q8NCU4 936 aa3.32□□□□□ -1.88
UBBP3-201ENST00000445497 FAM200AQ8TCP9 573 aa3.32□□□□□ -1.88
UBBP3-201ENST00000445497 HELQQ8TDG4 1101 aa3.32□□□□□ -1.88
UBBP3-201ENST00000445497 TSR2Q969E8 191 aaKnown RBP3.32□□□□□ -1.88
UBBP3-201ENST00000445497 PGBD4Q96DM1 585 aa3.32□□□□□ -1.88
UBBP3-201ENST00000445497 SCLT1Q96NL6 688 aa3.32□□□□□ -1.88
UBBP3-201ENST00000445497 SPAG5Q96R06 1193 aa3.32□□□□□ -1.88
UBBP3-201ENST00000445497 HERPUD2Q9BSE4 406 aa3.32□□□□□ -1.88
UBBP3-201ENST00000445497 PRKD2Q9BZL6 878 aa3.32□□□□□ -1.88
UBBP3-201ENST00000445497 DNAJC25Q9H1X3 360 aa3.32□□□□□ -1.88
UBBP3-201ENST00000445497 PDCL3Q9H2J4 239 aa3.32□□□□□ -1.88
UBBP3-201ENST00000445497 DHX36Q9H2U1 1008 aaKnown RBP3.32□□□□□ -1.88
UBBP3-201ENST00000445497 NGRNQ9NPE2 291 aaKnown RBP3.32□□□□□ -1.88
UBBP3-201ENST00000445497 FANCLQ9NW38 375 aa3.32□□□□□ -1.88
UBBP3-201ENST00000445497 COMMD8Q9NX08 183 aa3.32□□□□□ -1.88
UBBP3-201ENST00000445497 SLAIN2Q9P270 581 aa3.32□□□□□ -1.88
UBBP3-201ENST00000445497 SEL1LQ9UBV2 794 aa3.32□□□□□ -1.88
UBBP3-201ENST00000445497 SUN2Q9UH99 717 aa3.32□□□□□ -1.88
UBBP3-201ENST00000445497 PCDHB8Q9UN66 801 aa3.32□□□□□ -1.88
UBBP3-201ENST00000445497 PHF8Q9UPP1 1060 aa3.32□□□□□ -1.88
UBBP3-201ENST00000445497 TTLL3Q9Y4R7 772 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms