RNA–Protein interactions for RNA: ENST00000445388.5

SEC22C-208, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 5

Gene SEC22C, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-208ENST00000445388 SPINK5Q9NQ38 1064 aaPredicted RBP19.79■□□□□ 0.76
SEC22C-208ENST00000445388 IBTKQ9P2D0 1353 aaPredicted RBP19.79■□□□□ 0.76
SEC22C-208ENST00000445388 CACNA1SQ13698 1873 aa19.78■□□□□ 0.76
SEC22C-208ENST00000445388 GPBP1L1Q9HC44 474 aaPredicted RBP19.78■□□□□ 0.76
SEC22C-208ENST00000445388 ATP5J2-PTCD1G3V325 749 aa19.77■□□□□ 0.76
SEC22C-208ENST00000445388 TWISTNBQ3B726 338 aaPredicted RBP19.77■□□□□ 0.76
SEC22C-208ENST00000445388 CRY2Q49AN0 593 aa19.77■□□□□ 0.76
SEC22C-208ENST00000445388 CCDC30Q5VVM6 783 aa19.77■□□□□ 0.76
SEC22C-208ENST00000445388 C7orf43Q8WVR3 580 aa19.77■□□□□ 0.76
SEC22C-208ENST00000445388 FANCIQ9NVI1 1328 aa19.76■□□□□ 0.75
SEC22C-208ENST00000445388 SBF1O95248 1867 aa19.76■□□□□ 0.75
SEC22C-208ENST00000445388 ANKRD36CQ5JPF3 1778 aa19.76■□□□□ 0.75
SEC22C-208ENST00000445388 OLFM4Q6UX06 510 aa19.76■□□□□ 0.75
SEC22C-208ENST00000445388 LMNB1P20700 586 aa19.75■□□□□ 0.75
SEC22C-208ENST00000445388 SLC10A5Q5PT55 438 aa19.75■□□□□ 0.75
SEC22C-208ENST00000445388 RIC3Q7Z5B4 369 aa19.75■□□□□ 0.75
SEC22C-208ENST00000445388 ISCA1Q9BUE6 129 aa19.75■□□□□ 0.75
SEC22C-208ENST00000445388 TRMT112Q9UI30 125 aaKnown RBP19.75■□□□□ 0.75
SEC22C-208ENST00000445388 HCLS1P14317 486 aaPredicted RBP19.74■□□□□ 0.75
SEC22C-208ENST00000445388 ALDH1B1P30837 517 aa19.74■□□□□ 0.75
SEC22C-208ENST00000445388 ARFGEF2Q9Y6D5 1785 aa19.74■□□□□ 0.75
SEC22C-208ENST00000445388 RIC1Q4ADV7 1423 aa19.74■□□□□ 0.75
SEC22C-208ENST00000445388 EXOSC9Q06265 439 aaKnown RBP19.73■□□□□ 0.75
SEC22C-208ENST00000445388 GOLGA2Q08379 1002 aa19.73■□□□□ 0.75
SEC22C-208ENST00000445388 RPGRQ92834 1020 aaKnown RBP19.73■□□□□ 0.75
SEC22C-208ENST00000445388 NLRP3Q96P20 1036 aa19.73■□□□□ 0.75
SEC22C-208ENST00000445388 HOXA10P31260 410 aaPredicted RBP19.72■□□□□ 0.75
SEC22C-208ENST00000445388 FER1L6Q2WGJ9 1857 aa19.72■□□□□ 0.75
SEC22C-208ENST00000445388 SLC51AQ86UW1 340 aa19.72■□□□□ 0.75
SEC22C-208ENST00000445388 VAMP4O75379 141 aa19.71■□□□□ 0.75
SEC22C-208ENST00000445388 C1QTNF8P60827 252 aa19.71■□□□□ 0.75
SEC22C-208ENST00000445388 G2E3Q7L622 706 aa19.71■□□□□ 0.75
SEC22C-208ENST00000445388 FAM89AQ96GI7 184 aa19.71■□□□□ 0.75
SEC22C-208ENST00000445388 RBM17Q96I25 401 aaKnown RBP19.71■□□□□ 0.75
SEC22C-208ENST00000445388 MYD88Q99836 296 aa19.71■□□□□ 0.75
SEC22C-208ENST00000445388 STK31Q9BXU1 1019 aa19.71■□□□□ 0.75
SEC22C-208ENST00000445388 CHMP4AQ9BY43 222 aa19.71■□□□□ 0.75
SEC22C-208ENST00000445388 RNF123Q5XPI4 1314 aa19.71■□□□□ 0.75
SEC22C-208ENST00000445388 SH3TC1Q8TE82 1336 aa19.71■□□□□ 0.75
SEC22C-208ENST00000445388 SLC4A2P04920 1241 aa19.7■□□□□ 0.74
SEC22C-208ENST00000445388 CCDC93Q567U6 631 aa19.7■□□□□ 0.74
SEC22C-208ENST00000445388 RTL5Q5HYW3 569 aaPredicted RBP19.7■□□□□ 0.74
SEC22C-208ENST00000445388 SOGA3Q5TF21 947 aa19.7■□□□□ 0.74
SEC22C-208ENST00000445388 TAOK3Q9H2K8 898 aa19.7■□□□□ 0.74
SEC22C-208ENST00000445388 NMRK2Q9NPI5 230 aa19.7■□□□□ 0.74
SEC22C-208ENST00000445388 CCDC88AQ3V6T2 1871 aa19.7■□□□□ 0.74
SEC22C-208ENST00000445388 ZNF521Q96K83 1311 aa19.7■□□□□ 0.74
SEC22C-208ENST00000445388 CCER2I3L3R5 266 aa19.69■□□□□ 0.74
SEC22C-208ENST00000445388 KIF3CO14782 793 aa19.69■□□□□ 0.74
SEC22C-208ENST00000445388 TRIM28Q13263 835 aaKnown RBP19.69■□□□□ 0.74
SEC22C-208ENST00000445388 CRAMP1Q96RY5 1269 aa19.69■□□□□ 0.74
SEC22C-208ENST00000445388 MAP3K2Q9Y2U5 619 aa19.69■□□□□ 0.74
SEC22C-208ENST00000445388 LTBP3Q9NS15 1303 aa19.69■□□□□ 0.74
SEC22C-208ENST00000445388 DDX58O95786 925 aaKnown RBP19.68■□□□□ 0.74
SEC22C-208ENST00000445388 METTL22Q9BUU2 404 aaPredicted RBP19.68■□□□□ 0.74
SEC22C-208ENST00000445388 PI4KAP2A4QPH2 592 aa19.67■□□□□ 0.74
SEC22C-208ENST00000445388 KSR2Q6VAB6 950 aa19.67■□□□□ 0.74
SEC22C-208ENST00000445388 PI4KAP1Q8N8J0 262 aa19.67■□□□□ 0.74
SEC22C-208ENST00000445388 JARID2Q92833 1246 aaPredicted RBP19.67■□□□□ 0.74
SEC22C-208ENST00000445388 MYH16Q9H6N6 1097 aa19.67■□□□□ 0.74
SEC22C-208ENST00000445388 LAMB2P55268 1798 aa19.66■□□□□ 0.74
SEC22C-208ENST00000445388 PPEF1O14829 653 aaPredicted RBP19.66■□□□□ 0.74
SEC22C-208ENST00000445388 FKBP4Q02790 459 aaKnown RBP eCLIP19.66■□□□□ 0.74
SEC22C-208ENST00000445388 RTKN2Q8IZC4 609 aa19.66■□□□□ 0.74
SEC22C-208ENST00000445388 ZNF277Q9NRM2 450 aaPredicted RBP19.66■□□□□ 0.74
SEC22C-208ENST00000445388 ABCC4O15439 1325 aa19.66■□□□□ 0.74
SEC22C-208ENST00000445388 RRAGCQ9HB90 399 aa19.65■□□□□ 0.74
SEC22C-208ENST00000445388 IRS4O14654 1257 aaPredicted RBP19.64■□□□□ 0.73
SEC22C-208ENST00000445388 IGKV5-2P06315 115 aa19.64■□□□□ 0.73
SEC22C-208ENST00000445388 CCDC191Q8NCU4 936 aa19.64■□□□□ 0.73
SEC22C-208ENST00000445388 KDM2BQ8NHM5 1336 aa19.64■□□□□ 0.73
SEC22C-208ENST00000445388 ZC3H4Q9UPT8 1303 aaKnown RBP19.64■□□□□ 0.73
SEC22C-208ENST00000445388 SNED1Q8TER0 1413 aa19.64■□□□□ 0.73
SEC22C-208ENST00000445388 TIAM2Q8IVF5 1701 aa19.64■□□□□ 0.73
SEC22C-208ENST00000445388 DDX60Q8IY21 1712 aaKnown RBP19.64■□□□□ 0.73
SEC22C-208ENST00000445388 GLTPD2A6NH11 291 aa19.63■□□□□ 0.73
SEC22C-208ENST00000445388 FLIIQ13045 1269 aa19.63■□□□□ 0.73
SEC22C-208ENST00000445388 DIEXFQ68CQ4 756 aaKnown RBP19.63■□□□□ 0.73
SEC22C-208ENST00000445388 DDX46Q7L014 1031 aaKnown RBP19.63■□□□□ 0.73
SEC22C-208ENST00000445388 ZBTB38Q8NAP3 1195 aaPredicted RBP19.63■□□□□ 0.73
SEC22C-208ENST00000445388 CWC25Q9NXE8 425 aaPredicted RBP19.63■□□□□ 0.73
SEC22C-208ENST00000445388 MIER1Q8N108 512 aa19.62■□□□□ 0.73
SEC22C-208ENST00000445388 DICER1Q9UPY3 1922 aaKnown RBP19.61■□□□□ 0.73
SEC22C-208ENST00000445388 PCCAP05165 728 aaPredicted RBP19.61■□□□□ 0.73
SEC22C-208ENST00000445388 SF3B3Q15393 1217 aaKnown RBP19.61■□□□□ 0.73
SEC22C-208ENST00000445388 CWF19L2Q2TBE0 894 aaKnown RBP19.61■□□□□ 0.73
SEC22C-208ENST00000445388 CC2D2BQ6DHV5 1058 aa19.61■□□□□ 0.73
SEC22C-208ENST00000445388 ATP6V0A2Q9Y487 856 aa19.61■□□□□ 0.73
SEC22C-208ENST00000445388 TAF1P21675 1872 aa19.6■□□□□ 0.73
SEC22C-208ENST00000445388 BBOX1O75936 387 aa19.6■□□□□ 0.73
SEC22C-208ENST00000445388 IARSP41252 1262 aaKnown RBP19.6■□□□□ 0.73
SEC22C-208ENST00000445388 FKBP5Q13451 457 aaPredicted RBP19.6■□□□□ 0.73
SEC22C-208ENST00000445388 GRAPQ13588 217 aa19.6■□□□□ 0.73
SEC22C-208ENST00000445388 GRAPLQ8TC17 118 aaPredicted RBP19.6■□□□□ 0.73
SEC22C-208ENST00000445388 CDCA7LQ96GN5 454 aa19.6■□□□□ 0.73
SEC22C-208ENST00000445388 PSMD1Q99460 953 aa19.6■□□□□ 0.73
SEC22C-208ENST00000445388 NEXNQ0ZGT2 675 aa19.59■□□□□ 0.73
SEC22C-208ENST00000445388 DPY19L2Q6NUT2 758 aa19.59■□□□□ 0.73
SEC22C-208ENST00000445388 CELF1Q92879 486 aaKnown RBP19.59■□□□□ 0.73
SEC22C-208ENST00000445388 NEURL1BA8MQ27 555 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms