RNA–Protein interactions for RNA: ENST00000445237.2

HDAC7-214, Transcript of histone deacetylase 7, humanhuman

TSL 4

Gene HDAC7, Length 364 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-214ENST00000445237 PARP10Q53GL7 1025 aa23.26■■□□□ 1.31
HDAC7-214ENST00000445237 PPP1R42Q7Z4L9 355 aa23.26■■□□□ 1.31
HDAC7-214ENST00000445237 SLC51AQ86UW1 340 aa23.26■■□□□ 1.31
HDAC7-214ENST00000445237 RTKN2Q8IZC4 609 aa23.26■■□□□ 1.31
HDAC7-214ENST00000445237 DDX21Q9NR30 783 aaKnown RBP eCLIP23.26■■□□□ 1.31
HDAC7-214ENST00000445237 CHPF2Q9P2E5 772 aa23.25■■□□□ 1.31
HDAC7-214ENST00000445237 WDR90Q96KV7 1748 aa23.25■■□□□ 1.31
HDAC7-214ENST00000445237 RIC1Q4ADV7 1423 aa23.25■■□□□ 1.31
HDAC7-214ENST00000445237 APAF1O14727 1248 aa23.24■■□□□ 1.31
HDAC7-214ENST00000445237 HOXA10P31260 410 aaPredicted RBP23.24■■□□□ 1.31
HDAC7-214ENST00000445237 SYNE4Q8N205 404 aa23.24■■□□□ 1.31
HDAC7-214ENST00000445237 UTP14AQ9BVJ6 771 aaKnown RBP23.24■■□□□ 1.31
HDAC7-214ENST00000445237 TCERG1O14776 1098 aaKnown RBP23.23■■□□□ 1.31
HDAC7-214ENST00000445237 HDGFL1Q5TGJ6 251 aa23.23■■□□□ 1.31
HDAC7-214ENST00000445237 ZNF428Q96B54 188 aa23.23■■□□□ 1.31
HDAC7-214ENST00000445237 CFAP44Q96MT7 982 aa23.23■■□□□ 1.31
HDAC7-214ENST00000445237 RBM17Q96I25 401 aaKnown RBP23.22■■□□□ 1.31
HDAC7-214ENST00000445237 IARSP41252 1262 aaKnown RBP23.21■■□□□ 1.31
HDAC7-214ENST00000445237 NLRP10Q86W26 655 aa23.21■■□□□ 1.31
HDAC7-214ENST00000445237 CRAMP1Q96RY5 1269 aa23.21■■□□□ 1.31
HDAC7-214ENST00000445237 MBIPQ9NS73 344 aa23.21■■□□□ 1.31
HDAC7-214ENST00000445237 ZNF541Q9H0D2 1346 aa23.21■■□□□ 1.31
HDAC7-214ENST00000445237 SNED1Q8TER0 1413 aa23.21■■□□□ 1.31
HDAC7-214ENST00000445237 POTEIP0CG38 1075 aa23.2■■□□□ 1.3
HDAC7-214ENST00000445237 POTEJP0CG39 1038 aa23.2■■□□□ 1.3
HDAC7-214ENST00000445237 CCDC184Q52MB2 194 aa23.2■■□□□ 1.3
HDAC7-214ENST00000445237 SLC10A5Q5PT55 438 aa23.2■■□□□ 1.3
HDAC7-214ENST00000445237 DUSP27Q5VZP5 1158 aa23.2■■□□□ 1.3
HDAC7-214ENST00000445237 NLRP3Q96P20 1036 aa23.2■■□□□ 1.3
HDAC7-214ENST00000445237 PPEF1O14829 653 aaPredicted RBP23.19■■□□□ 1.3
HDAC7-214ENST00000445237 HCLS1P14317 486 aaPredicted RBP23.19■■□□□ 1.3
HDAC7-214ENST00000445237 TCIRG1Q13488 830 aa23.19■■□□□ 1.3
HDAC7-214ENST00000445237 HSP90AB3PQ58FF7 597 aa23.19■■□□□ 1.3
HDAC7-214ENST00000445237 HOXB7P09629 217 aa23.18■■□□□ 1.3
HDAC7-214ENST00000445237 ZNF853P0CG23 659 aa23.18■■□□□ 1.3
HDAC7-214ENST00000445237 PSMD1Q99460 953 aa23.18■■□□□ 1.3
HDAC7-214ENST00000445237 CC2D2BQ6DHV5 1058 aa23.17■■□□□ 1.3
HDAC7-214ENST00000445237 KLRG1Q96E93 195 aa23.17■■□□□ 1.3
HDAC7-214ENST00000445237 DBF4Q9UBU7 674 aaPredicted RBP23.17■■□□□ 1.3
HDAC7-214ENST00000445237 TRMT112Q9UI30 125 aaKnown RBP23.17■■□□□ 1.3
HDAC7-214ENST00000445237 ELL2O00472 640 aaPredicted RBP23.16■■□□□ 1.3
HDAC7-214ENST00000445237 PLBD2Q8NHP8 589 aa23.16■■□□□ 1.3
HDAC7-214ENST00000445237 L3MBTL3Q96JM7 780 aaPredicted RBP23.16■■□□□ 1.3
HDAC7-214ENST00000445237 RNF123Q5XPI4 1314 aa23.15■■□□□ 1.3
HDAC7-214ENST00000445237 ANKRD36CQ5JPF3 1778 aa23.15■■□□□ 1.3
HDAC7-214ENST00000445237 CHADLQ6NUI6 762 aa23.15■■□□□ 1.3
HDAC7-214ENST00000445237 ANKRD13DQ6ZTN6 518 aa23.15■■□□□ 1.3
HDAC7-214ENST00000445237 TAF1DQ9H5J8 278 aaPredicted RBP23.15■■□□□ 1.3
HDAC7-214ENST00000445237 IFT57Q9NWB7 429 aa23.15■■□□□ 1.3
HDAC7-214ENST00000445237 ABCC4O15439 1325 aa23.14■■□□□ 1.3
HDAC7-214ENST00000445237 COL4A5P29400 1685 aa23.14■■□□□ 1.29
HDAC7-214ENST00000445237 IQCA1LA6NCM1 817 aa23.14■■□□□ 1.29
HDAC7-214ENST00000445237 FZD9O00144 591 aa23.14■■□□□ 1.29
HDAC7-214ENST00000445237 GNAI1P63096 354 aa23.14■■□□□ 1.29
HDAC7-214ENST00000445237 SH3TC1Q8TE82 1336 aa23.13■■□□□ 1.29
HDAC7-214ENST00000445237 ATP5J2-PTCD1G3V325 749 aa23.13■■□□□ 1.29
HDAC7-214ENST00000445237 JDP2Q8WYK2 163 aa23.13■■□□□ 1.29
HDAC7-214ENST00000445237 HYPKQ9NX55 129 aa23.13■■□□□ 1.29
HDAC7-214ENST00000445237 CALD1Q05682 793 aaKnown RBP23.12■■□□□ 1.29
HDAC7-214ENST00000445237 LARGE2Q8N3Y3 721 aa23.12■■□□□ 1.29
HDAC7-214ENST00000445237 ATP6V0A2Q9Y487 856 aa23.12■■□□□ 1.29
HDAC7-214ENST00000445237 GRIPAP1Q4V328 841 aa23.11■■□□□ 1.29
HDAC7-214ENST00000445237 C8orf58Q8NAV2 365 aa23.11■■□□□ 1.29
HDAC7-214ENST00000445237 ISCA1Q9BUE6 129 aa23.11■■□□□ 1.29
HDAC7-214ENST00000445237 EAPPQ56P03 285 aaPredicted RBP23.1■■□□□ 1.29
HDAC7-214ENST00000445237 FAM89AQ96GI7 184 aa23.1■■□□□ 1.29
HDAC7-214ENST00000445237 PHAXQ9H814 394 aaKnown RBP23.1■■□□□ 1.29
HDAC7-214ENST00000445237 HACL1Q9UJ83 578 aa23.1■■□□□ 1.29
HDAC7-214ENST00000445237 GJA3Q9Y6H8 435 aa23.1■■□□□ 1.29
HDAC7-214ENST00000445237 ZEB1P37275 1124 aaPredicted RBP23.09■■□□□ 1.29
HDAC7-214ENST00000445237 EIF6P56537 245 aaKnown RBP23.09■■□□□ 1.29
HDAC7-214ENST00000445237 RTL5Q5HYW3 569 aaPredicted RBP23.09■■□□□ 1.29
HDAC7-214ENST00000445237 DDX46Q7L014 1031 aaKnown RBP23.09■■□□□ 1.29
HDAC7-214ENST00000445237 LDHDQ86WU2 507 aa23.09■■□□□ 1.29
HDAC7-214ENST00000445237 GPC2Q8N158 579 aa23.09■■□□□ 1.29
HDAC7-214ENST00000445237 TMX4Q9H1E5 349 aaPredicted RBP23.09■■□□□ 1.29
HDAC7-214ENST00000445237 LAMB2P55268 1798 aa23.09■■□□□ 1.29
HDAC7-214ENST00000445237 PPIP5K2O43314 1243 aa23.08■■□□□ 1.29
HDAC7-214ENST00000445237 BBOX1O75936 387 aa23.08■■□□□ 1.29
HDAC7-214ENST00000445237 EPHX2P34913 555 aa23.08■■□□□ 1.29
HDAC7-214ENST00000445237 AOC3Q16853 763 aa23.08■■□□□ 1.29
HDAC7-214ENST00000445237 JMYQ8N9B5 988 aa23.08■■□□□ 1.29
HDAC7-214ENST00000445237 RIC3Q7Z5B4 369 aa23.07■■□□□ 1.28
HDAC7-214ENST00000445237 SCN4AP35499 1836 aa23.07■■□□□ 1.28
HDAC7-214ENST00000445237 GOLGA2Q08379 1002 aa23.06■■□□□ 1.28
HDAC7-214ENST00000445237 GRAPQ13588 217 aa23.06■■□□□ 1.28
HDAC7-214ENST00000445237 SP8Q8IXZ3 490 aa23.06■■□□□ 1.28
HDAC7-214ENST00000445237 NIM1KQ8IY84 436 aa23.06■■□□□ 1.28
HDAC7-214ENST00000445237 GRAPLQ8TC17 118 aaPredicted RBP23.06■■□□□ 1.28
HDAC7-214ENST00000445237 CLEC11AQ9Y240 323 aa23.06■■□□□ 1.28
HDAC7-214ENST00000445237 DPP8Q6V1X1 898 aaPredicted RBP23.05■■□□□ 1.28
HDAC7-214ENST00000445237 TSPYL6Q8N831 410 aa23.05■■□□□ 1.28
HDAC7-214ENST00000445237 TSR2Q969E8 191 aaKnown RBP23.05■■□□□ 1.28
HDAC7-214ENST00000445237 MPNDQ8N594 471 aa23.04■■□□□ 1.28
HDAC7-214ENST00000445237 RTFDC1Q9BY42 306 aaPredicted RBP23.04■■□□□ 1.28
HDAC7-214ENST00000445237 ZNF316A6NFI3 1004 aaPredicted RBP23.03■■□□□ 1.28
HDAC7-214ENST00000445237 TRIM28Q13263 835 aaKnown RBP23.03■■□□□ 1.28
HDAC7-214ENST00000445237 MYD88Q99836 296 aa23.03■■□□□ 1.28
HDAC7-214ENST00000445237 DDX60Q8IY21 1712 aaKnown RBP23.02■■□□□ 1.28
HDAC7-214ENST00000445237 PNMA8AQ86V59 439 aaPredicted RBP23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms