RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 RRAGCQ9HB90 399 aa21.9■■□□□ 1.1
LIME1-202ENST00000444951 CACNA1SQ13698 1873 aa21.9■■□□□ 1.1
LIME1-202ENST00000444951 PLIN1O60240 522 aa21.89■■□□□ 1.09
LIME1-202ENST00000444951 ANKRD13DQ6ZTN6 518 aa21.89■■□□□ 1.09
LIME1-202ENST00000444951 ZNF622Q969S3 477 aaKnown RBP eCLIP21.89■■□□□ 1.09
LIME1-202ENST00000444951 BRIP1Q9BX63 1249 aa21.89■■□□□ 1.09
LIME1-202ENST00000444951 ZNF219Q9P2Y4 722 aaPredicted RBP21.89■■□□□ 1.09
LIME1-202ENST00000444951 CACNA1FO60840 1977 aa21.88■■□□□ 1.09
LIME1-202ENST00000444951 KDM2BQ8NHM5 1336 aa21.88■■□□□ 1.09
LIME1-202ENST00000444951 SLX4Q8IY92 1834 aa21.88■■□□□ 1.09
LIME1-202ENST00000444951 PI4KAP2A4QPH2 592 aa21.88■■□□□ 1.09
LIME1-202ENST00000444951 F6X3S4 739 aa21.88■■□□□ 1.09
LIME1-202ENST00000444951 LMNB1P20700 586 aa21.88■■□□□ 1.09
LIME1-202ENST00000444951 PI4KAP1Q8N8J0 262 aa21.88■■□□□ 1.09
LIME1-202ENST00000444951 RBM46Q8TBY0 533 aaKnown RBP21.88■■□□□ 1.09
LIME1-202ENST00000444951 SETDB2Q96T68 719 aa21.88■■□□□ 1.09
LIME1-202ENST00000444951 FER1L6Q2WGJ9 1857 aa21.88■■□□□ 1.09
LIME1-202ENST00000444951 MAP3K15Q6ZN16 1313 aa21.87■■□□□ 1.09
LIME1-202ENST00000444951 IPO8O15397 1037 aaKnown RBP21.87■■□□□ 1.09
LIME1-202ENST00000444951 CNBD1Q8NA66 436 aa21.87■■□□□ 1.09
LIME1-202ENST00000444951 TNNQ9UQP3 1299 aa21.87■■□□□ 1.09
LIME1-202ENST00000444951 MAP3K2Q9Y2U5 619 aa21.87■■□□□ 1.09
LIME1-202ENST00000444951 SUPT16HQ9Y5B9 1047 aaKnown RBP21.87■■□□□ 1.09
LIME1-202ENST00000444951 WDR90Q96KV7 1748 aa21.86■■□□□ 1.09
LIME1-202ENST00000444951 PTPRCP08575 1304 aa21.86■■□□□ 1.09
LIME1-202ENST00000444951 C21orf2O43822 256 aa21.86■■□□□ 1.09
LIME1-202ENST00000444951 PDE6BP35913 854 aa21.86■■□□□ 1.09
LIME1-202ENST00000444951 APLP1P51693 650 aa21.86■■□□□ 1.09
LIME1-202ENST00000444951 BRPF1P55201 1214 aaPredicted RBP21.86■■□□□ 1.09
LIME1-202ENST00000444951 HTRA3P83110 453 aa21.86■■□□□ 1.09
LIME1-202ENST00000444951 HLFQ16534 295 aa21.86■■□□□ 1.09
LIME1-202ENST00000444951 ZKSCAN2Q63HK3 967 aa21.86■■□□□ 1.09
LIME1-202ENST00000444951 SLC4A10Q6U841 1118 aa21.86■■□□□ 1.09
LIME1-202ENST00000444951 KSR2Q6VAB6 950 aa21.86■■□□□ 1.09
LIME1-202ENST00000444951 PLBD2Q8NHP8 589 aa21.86■■□□□ 1.09
LIME1-202ENST00000444951 CLUAP1Q96AJ1 413 aa21.86■■□□□ 1.09
LIME1-202ENST00000444951 DNAJC5GQ8N7S2 189 aa21.85■■□□□ 1.09
LIME1-202ENST00000444951 C16orf71Q8IYS4 520 aaPredicted RBP21.84■■□□□ 1.09
LIME1-202ENST00000444951 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.84■■□□□ 1.09
LIME1-202ENST00000444951 MYD88Q99836 296 aa21.84■■□□□ 1.09
LIME1-202ENST00000444951 API5Q9BZZ5 524 aaKnown RBP21.84■■□□□ 1.09
LIME1-202ENST00000444951 ARFGEF2Q9Y6D5 1785 aa21.84■■□□□ 1.09
LIME1-202ENST00000444951 ZC3H4Q9UPT8 1303 aaKnown RBP21.83■■□□□ 1.09
LIME1-202ENST00000444951 ERVV-1B6SEH8 477 aa21.83■■□□□ 1.09
LIME1-202ENST00000444951 TRIM27P14373 513 aa21.83■■□□□ 1.09
LIME1-202ENST00000444951 ATF7IPQ6VMQ6 1270 aa21.83■■□□□ 1.09
LIME1-202ENST00000444951 DNAAF4Q8WXU2 420 aa21.83■■□□□ 1.09
LIME1-202ENST00000444951 DICER1Q9UPY3 1922 aaKnown RBP21.82■■□□□ 1.08
LIME1-202ENST00000444951 GLTPD2A6NH11 291 aa21.82■■□□□ 1.08
LIME1-202ENST00000444951 SRGNP10124 158 aa21.82■■□□□ 1.08
LIME1-202ENST00000444951 GPTP24298 496 aa21.82■■□□□ 1.08
LIME1-202ENST00000444951 RRP1P56182 461 aaKnown RBP21.82■■□□□ 1.08
LIME1-202ENST00000444951 ARHGAP45Q92619 1136 aa21.82■■□□□ 1.08
LIME1-202ENST00000444951 PDZRN3Q9UPQ7 1066 aa21.82■■□□□ 1.08
LIME1-202ENST00000444951 ZNF652Q9Y2D9 606 aa21.82■■□□□ 1.08
LIME1-202ENST00000444951 ATP5J2-PTCD1G3V325 749 aa21.81■■□□□ 1.08
LIME1-202ENST00000444951 NPHP1O15259 732 aa21.81■■□□□ 1.08
LIME1-202ENST00000444951 ST5P78524 1137 aa21.81■■□□□ 1.08
LIME1-202ENST00000444951 CLEC4GQ6UXB4 293 aa21.81■■□□□ 1.08
LIME1-202ENST00000444951 GIGYF2Q6Y7W6 1299 aaKnown RBP21.81■■□□□ 1.08
LIME1-202ENST00000444951 FTSJ3Q8IY81 847 aaKnown RBP21.81■■□□□ 1.08
LIME1-202ENST00000444951 NEXNQ0ZGT2 675 aa21.8■■□□□ 1.08
LIME1-202ENST00000444951 FSTL1Q12841 308 aa21.8■■□□□ 1.08
LIME1-202ENST00000444951 STYK1Q6J9G0 422 aa21.8■■□□□ 1.08
LIME1-202ENST00000444951 PRPF40BQ6NWY9 871 aaKnown RBP21.8■■□□□ 1.08
LIME1-202ENST00000444951 NBPF5PQ86XG9 351 aaPredicted RBP21.8■■□□□ 1.08
LIME1-202ENST00000444951 METTL22Q9BUU2 404 aaPredicted RBP21.8■■□□□ 1.08
LIME1-202ENST00000444951 NUP98P52948 1817 aa21.79■■□□□ 1.08
LIME1-202ENST00000444951 FAM177BA6PVY3 158 aa21.79■■□□□ 1.08
LIME1-202ENST00000444951 POTECB2RU33 542 aa21.79■■□□□ 1.08
LIME1-202ENST00000444951 PANK1Q8TE04 598 aa21.79■■□□□ 1.08
LIME1-202ENST00000444951 TCIRG1Q13488 830 aa21.78■■□□□ 1.08
LIME1-202ENST00000444951 C20orf194Q5TEA3 1177 aa21.78■■□□□ 1.08
LIME1-202ENST00000444951 DZIP1LQ8IYY4 767 aaKnown RBP21.78■■□□□ 1.08
LIME1-202ENST00000444951 MASTLQ96GX5 879 aa21.78■■□□□ 1.08
LIME1-202ENST00000444951 NIP7Q9Y221 180 aaKnown RBP eCLIP21.78■■□□□ 1.08
LIME1-202ENST00000444951 CWF19L2Q2TBE0 894 aaKnown RBP21.77■■□□□ 1.08
LIME1-202ENST00000444951 HSP90AB3PQ58FF7 597 aa21.77■■□□□ 1.08
LIME1-202ENST00000444951 CNKSR1Q969H4 720 aa21.77■■□□□ 1.08
LIME1-202ENST00000444951 RLBP1P12271 317 aa21.76■■□□□ 1.07
LIME1-202ENST00000444951 C7orf43Q8WVR3 580 aa21.76■■□□□ 1.07
LIME1-202ENST00000444951 ABCC4O15439 1325 aa21.76■■□□□ 1.07
LIME1-202ENST00000444951 LTBP3Q9NS15 1303 aa21.76■■□□□ 1.07
LIME1-202ENST00000444951 IGKV5-2P06315 115 aa21.75■■□□□ 1.07
LIME1-202ENST00000444951 VEGFAP15692 232 aaPredicted RBP21.75■■□□□ 1.07
LIME1-202ENST00000444951 ERFEQ4G0M1 354 aa21.75■■□□□ 1.07
LIME1-202ENST00000444951 BEND3Q5T5X7 828 aa21.75■■□□□ 1.07
LIME1-202ENST00000444951 OLFM4Q6UX06 510 aa21.75■■□□□ 1.07
LIME1-202ENST00000444951 TMEM57Q8N5G2 664 aa21.75■■□□□ 1.07
LIME1-202ENST00000444951 SMC1BQ8NDV3 1235 aa21.75■■□□□ 1.07
LIME1-202ENST00000444951 SRCIN1Q9C0H9 1055 aa21.75■■□□□ 1.07
LIME1-202ENST00000444951 TAOK3Q9H2K8 898 aa21.75■■□□□ 1.07
LIME1-202ENST00000444951 PCNTO95613 3336 aa21.75■■□□□ 1.07
LIME1-202ENST00000444951 KLRG2A4D1S0 409 aaPredicted RBP21.74■■□□□ 1.07
LIME1-202ENST00000444951 MS4A1P11836 297 aa21.74■■□□□ 1.07
LIME1-202ENST00000444951 IRX6P78412 446 aaPredicted RBP21.74■■□□□ 1.07
LIME1-202ENST00000444951 ZNF34Q8IZ26 560 aa21.74■■□□□ 1.07
LIME1-202ENST00000444951 LINS1Q8NG48 757 aa21.74■■□□□ 1.07
LIME1-202ENST00000444951 UBN2Q6ZU65 1347 aa21.74■■□□□ 1.07
LIME1-202ENST00000444951 ANKRD36CQ5JPF3 1778 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms