RNA–Protein interactions for RNA: ENST00000444739.6

CASP4-203, Transcript of caspase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP4, Length 2,158 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-203ENST00000444739 CREBRFQ8IUR6 639 aa11.86□□□□□ -0.51
CASP4-203ENST00000444739 LEO1Q8WVC0 666 aaPredicted RBP11.86□□□□□ -0.51
CASP4-203ENST00000444739 KIF1BPQ96EK5 621 aa11.86□□□□□ -0.51
CASP4-203ENST00000444739 MRFAP1L1Q96HT8 127 aa11.86□□□□□ -0.51
CASP4-203ENST00000444739 SPATA32Q96LK8 384 aa11.86□□□□□ -0.51
CASP4-203ENST00000444739 ST7Q9NRC1 585 aa11.86□□□□□ -0.51
CASP4-203ENST00000444739 ZNF446Q9NWS9 450 aa11.86□□□□□ -0.51
CASP4-203ENST00000444739 NAP1L2Q9ULW6 460 aaPredicted RBP11.86□□□□□ -0.51
CASP4-203ENST00000444739 NALCNQ8IZF0 1738 aa11.85□□□□□ -0.51
CASP4-203ENST00000444739 GOLGA6L4A6NEF3 574 aa11.85□□□□□ -0.51
CASP4-203ENST00000444739 TULP2O00295 520 aa11.85□□□□□ -0.51
CASP4-203ENST00000444739 CAVIN2O95810 425 aa11.85□□□□□ -0.51
CASP4-203ENST00000444739 PDCP20941 246 aa11.85□□□□□ -0.51
CASP4-203ENST00000444739 SLC20A2Q08357 652 aa11.85□□□□□ -0.51
CASP4-203ENST00000444739 CCDC30Q5VVM6 783 aa11.85□□□□□ -0.51
CASP4-203ENST00000444739 NUDT16Q96DE0 195 aaKnown RBP11.85□□□□□ -0.51
CASP4-203ENST00000444739 CALCOCO1Q9P1Z2 691 aa11.85□□□□□ -0.51
CASP4-203ENST00000444739 VGLL3A8MV65 326 aa11.85□□□□□ -0.51
CASP4-203ENST00000444739 NPM3O75607 178 aaKnown RBP11.85□□□□□ -0.51
CASP4-203ENST00000444739 CCZ1BP86790 482 aa11.85□□□□□ -0.51
CASP4-203ENST00000444739 CCZ1P86791 482 aaPredicted RBP11.85□□□□□ -0.51
CASP4-203ENST00000444739 NECTIN1Q15223 517 aa11.85□□□□□ -0.51
CASP4-203ENST00000444739 MTHFSDQ2M296 383 aaKnown RBP11.85□□□□□ -0.51
CASP4-203ENST00000444739 PGBD1Q96JS3 809 aa11.85□□□□□ -0.51
CASP4-203ENST00000444739 KCND1Q9NSA2 647 aa11.85□□□□□ -0.51
CASP4-203ENST00000444739 TFIP11Q9UBB9 837 aaKnown RBP11.85□□□□□ -0.51
CASP4-203ENST00000444739 FMN2Q9NZ56 1722 aa11.84□□□□□ -0.51
CASP4-203ENST00000444739 ERICH4A6NGS2 130 aa11.84□□□□□ -0.51
CASP4-203ENST00000444739 SLU7O95391 586 aaKnown RBP11.84□□□□□ -0.51
CASP4-203ENST00000444739 SKILP12757 684 aa11.84□□□□□ -0.51
CASP4-203ENST00000444739 CDK11BP21127 795 aaKnown RBP11.84□□□□□ -0.51
CASP4-203ENST00000444739 HSP90AB2PQ58FF8 381 aa11.84□□□□□ -0.51
CASP4-203ENST00000444739 RUFY2Q8WXA3 655 aa11.84□□□□□ -0.51
CASP4-203ENST00000444739 CCAR2Q8N163 923 aaKnown RBP11.84□□□□□ -0.51
CASP4-203ENST00000444739 DDX54Q8TDD1 881 aaKnown RBP11.84□□□□□ -0.51
CASP4-203ENST00000444739 CCDC61Q9Y6R9 512 aa11.84□□□□□ -0.51
CASP4-203ENST00000444739 MAP3K19Q56UN5 1328 aa11.83□□□□□ -0.51
CASP4-203ENST00000444739 OVOS2A0A0J9YW53 1432 aa11.83□□□□□ -0.52
CASP4-203ENST00000444739 OVOS2Q6IE36 1432 aa11.83□□□□□ -0.52
CASP4-203ENST00000444739 CCDC69A6NI79 296 aa11.83□□□□□ -0.52
CASP4-203ENST00000444739 GLRX3O76003 335 aaKnown RBP11.83□□□□□ -0.52
CASP4-203ENST00000444739 H2AFXP16104 143 aaPredicted RBP11.83□□□□□ -0.52
CASP4-203ENST00000444739 COL9A3Q14050 684 aaPredicted RBP11.83□□□□□ -0.52
CASP4-203ENST00000444739 RNF20Q5VTR2 975 aa11.83□□□□□ -0.52
CASP4-203ENST00000444739 IPO4Q8TEX9 1081 aaKnown RBP11.83□□□□□ -0.52
CASP4-203ENST00000444739 TTC41PQ6P2S7 1318 aa11.83□□□□□ -0.52
CASP4-203ENST00000444739 CAPN2P17655 700 aa11.82□□□□□ -0.52
CASP4-203ENST00000444739 CYP2C19P33261 490 aa11.82□□□□□ -0.52
CASP4-203ENST00000444739 LARP1Q6PKG0 1096 aaKnown RBP11.82□□□□□ -0.52
CASP4-203ENST00000444739 C11orf57Q6ZUT1 292 aaPredicted RBP11.82□□□□□ -0.52
CASP4-203ENST00000444739 NECTIN2Q92692 538 aa11.82□□□□□ -0.52
CASP4-203ENST00000444739 ADCY9O60503 1353 aa11.82□□□□□ -0.52
CASP4-203ENST00000444739 GOLGA6L19H0YKK7 550 aa11.82□□□□□ -0.52
CASP4-203ENST00000444739 RAPGEF3O95398 923 aa11.82□□□□□ -0.52
CASP4-203ENST00000444739 ZKSCAN1P17029 563 aaPredicted RBP11.82□□□□□ -0.52
CASP4-203ENST00000444739 CREB3L3Q68CJ9 461 aa11.82□□□□□ -0.52
CASP4-203ENST00000444739 BICD2Q8TD16 824 aa11.82□□□□□ -0.52
CASP4-203ENST00000444739 TRMT1Q9NXH9 659 aaKnown RBP11.82□□□□□ -0.52
CASP4-203ENST00000444739 USP16Q9Y5T5 823 aa11.82□□□□□ -0.52
CASP4-203ENST00000444739 MYH15Q9Y2K3 1946 aa11.82□□□□□ -0.52
CASP4-203ENST00000444739 SRGAP3O43295 1099 aa11.81□□□□□ -0.52
CASP4-203ENST00000444739 GIGYF1O75420 1035 aaPredicted RBP11.81□□□□□ -0.52
CASP4-203ENST00000444739 BMS1Q14692 1282 aaKnown RBP11.81□□□□□ -0.52
CASP4-203ENST00000444739 FBXO31Q5XUX0 539 aaPredicted RBP11.81□□□□□ -0.52
CASP4-203ENST00000444739 DNAJC2Q99543 621 aaKnown RBP11.81□□□□□ -0.52
CASP4-203ENST00000444739 NOL10Q9BSC4 688 aaKnown RBP11.81□□□□□ -0.52
CASP4-203ENST00000444739 L2HGDHQ9H9P8 463 aa11.81□□□□□ -0.52
CASP4-203ENST00000444739 RBM8AQ9Y5S9 174 aaKnown RBP11.81□□□□□ -0.52
CASP4-203ENST00000444739 FHOD1Q9Y613 1164 aa11.81□□□□□ -0.52
CASP4-203ENST00000444739 NRXN3Q9Y4C0 1643 aa11.81□□□□□ -0.52
CASP4-203ENST00000444739 KDRP35968 1356 aa11.81□□□□□ -0.52
CASP4-203ENST00000444739 KIF2AO00139 706 aaPredicted RBP11.81□□□□□ -0.52
CASP4-203ENST00000444739 PRR36Q9H6K5 1346 aa11.8□□□□□ -0.52
CASP4-203ENST00000444739 MAP4K1Q92918 833 aa11.8□□□□□ -0.52
CASP4-203ENST00000444739 ALDH8A1Q9H2A2 487 aaPredicted RBP11.8□□□□□ -0.52
CASP4-203ENST00000444739 RICTORQ6R327 1708 aa11.8□□□□□ -0.52
CASP4-203ENST00000444739 STX1AQ16623 288 aa11.79□□□□□ -0.52
CASP4-203ENST00000444739 ERCC6LQ2NKX8 1250 aa11.79□□□□□ -0.52
CASP4-203ENST00000444739 FILIP1Q7Z7B0 1213 aa11.79□□□□□ -0.52
CASP4-203ENST00000444739 DHX40Q8IX18 779 aaKnown RBP11.79□□□□□ -0.52
CASP4-203ENST00000444739 SLC27A2O14975 620 aa11.79□□□□□ -0.52
CASP4-203ENST00000444739 PSMA5P28066 241 aa11.79□□□□□ -0.52
CASP4-203ENST00000444739 CLCN6P51797 869 aa11.79□□□□□ -0.52
CASP4-203ENST00000444739 RESTQ13127 1097 aa11.79□□□□□ -0.52
CASP4-203ENST00000444739 TOB2Q14106 344 aaPredicted RBP11.79□□□□□ -0.52
CASP4-203ENST00000444739 ANKRD1Q15327 319 aa11.79□□□□□ -0.52
CASP4-203ENST00000444739 CCDC93Q567U6 631 aa11.79□□□□□ -0.52
CASP4-203ENST00000444739 HSP90AB4PQ58FF6 505 aa11.79□□□□□ -0.52
CASP4-203ENST00000444739 LRRN4CLQ8ND94 238 aa11.79□□□□□ -0.52
CASP4-203ENST00000444739 GTF3C6Q969F1 213 aa11.79□□□□□ -0.52
CASP4-203ENST00000444739 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.79□□□□□ -0.52
CASP4-203ENST00000444739 CEP170BQ9Y4F5 1589 aaPredicted RBP11.79□□□□□ -0.52
CASP4-203ENST00000444739 A2ML1A8K2U0 1454 aa11.79□□□□□ -0.52
CASP4-203ENST00000444739 NPHP4O75161 1426 aaPredicted RBP11.79□□□□□ -0.52
CASP4-203ENST00000444739 USP31Q70CQ4 1352 aa11.78□□□□□ -0.52
CASP4-203ENST00000444739 NPHP1O15259 732 aa11.78□□□□□ -0.52
CASP4-203ENST00000444739 PLA2G4AP47712 749 aa11.78□□□□□ -0.52
CASP4-203ENST00000444739 HNRNPH2P55795 449 aaKnown RBP11.78□□□□□ -0.52
CASP4-203ENST00000444739 STAG3Q9UJ98 1225 aa11.78□□□□□ -0.52
CASP4-203ENST00000444739 NEO1Q92859 1461 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms