RNA–Protein interactions for RNA: ENST00000444588.3

NEURL3-203, Transcript of neuralized E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best)

Gene NEURL3, Length 1,041 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEURL3-203ENST00000444588 C8orf58Q8NAV2 365 aa29.15■■■□□ 2.26
NEURL3-203ENST00000444588 PLBD2Q8NHP8 589 aa29.15■■■□□ 2.26
NEURL3-203ENST00000444588 TCIRG1Q13488 830 aa29.14■■■□□ 2.26
NEURL3-203ENST00000444588 NLRP10Q86W26 655 aa29.13■■■□□ 2.25
NEURL3-203ENST00000444588 LAMB2P55268 1798 aa29.12■■■□□ 2.25
NEURL3-203ENST00000444588 KIF3CO14782 793 aa29.12■■■□□ 2.25
NEURL3-203ENST00000444588 HOXA10P31260 410 aaPredicted RBP29.12■■■□□ 2.25
NEURL3-203ENST00000444588 SLC10A5Q5PT55 438 aa29.12■■■□□ 2.25
NEURL3-203ENST00000444588 UTP14AQ9BVJ6 771 aaKnown RBP29.12■■■□□ 2.25
NEURL3-203ENST00000444588 SNED1Q8TER0 1413 aa29.11■■■□□ 2.25
NEURL3-203ENST00000444588 ANKRD13DQ6ZTN6 518 aa29.11■■■□□ 2.25
NEURL3-203ENST00000444588 ELL2O00472 640 aaPredicted RBP29.1■■■□□ 2.25
NEURL3-203ENST00000444588 ALDH1B1P30837 517 aa29.1■■■□□ 2.25
NEURL3-203ENST00000444588 TSR2Q969E8 191 aaKnown RBP29.1■■■□□ 2.25
NEURL3-203ENST00000444588 CHMP4AQ9BY43 222 aa29.1■■■□□ 2.25
NEURL3-203ENST00000444588 ZNF219Q9P2Y4 722 aaPredicted RBP29.1■■■□□ 2.25
NEURL3-203ENST00000444588 SENP3-EIF4A1A0A087X0R7 540 aa29.09■■■□□ 2.25
NEURL3-203ENST00000444588 TSPYL6Q8N831 410 aa29.09■■■□□ 2.25
NEURL3-203ENST00000444588 WDR63Q8IWG1 891 aa29.08■■■□□ 2.25
NEURL3-203ENST00000444588 ISCA1Q9BUE6 129 aa29.08■■■□□ 2.25
NEURL3-203ENST00000444588 TAOK3Q9H2K8 898 aa29.08■■■□□ 2.25
NEURL3-203ENST00000444588 CCDC93Q567U6 631 aa29.07■■■□□ 2.24
NEURL3-203ENST00000444588 C3orf67Q6ZVT6 689 aa29.07■■■□□ 2.24
NEURL3-203ENST00000444588 DDX60Q8IY21 1712 aaKnown RBP29.07■■■□□ 2.24
NEURL3-203ENST00000444588 CCDC30Q5VVM6 783 aa29.06■■■□□ 2.24
NEURL3-203ENST00000444588 PHAXQ9H814 394 aaKnown RBP29.06■■■□□ 2.24
NEURL3-203ENST00000444588 KDM2BQ8NHM5 1336 aa29.05■■■□□ 2.24
NEURL3-203ENST00000444588 TRIM28Q13263 835 aaKnown RBP29.05■■■□□ 2.24
NEURL3-203ENST00000444588 CRAMP1Q96RY5 1269 aa29.05■■■□□ 2.24
NEURL3-203ENST00000444588 NMRK2Q9NPI5 230 aa29.05■■■□□ 2.24
NEURL3-203ENST00000444588 FAM9BQ8IZU0 186 aa29.04■■■□□ 2.24
NEURL3-203ENST00000444588 RPGRQ92834 1020 aaKnown RBP29.04■■■□□ 2.24
NEURL3-203ENST00000444588 NLRP3Q96P20 1036 aa29.04■■■□□ 2.24
NEURL3-203ENST00000444588 SH3TC1Q8TE82 1336 aa29.03■■■□□ 2.24
NEURL3-203ENST00000444588 FANCIQ9NVI1 1328 aa29.03■■■□□ 2.24
NEURL3-203ENST00000444588 GOLGA2Q08379 1002 aa29.02■■■□□ 2.24
NEURL3-203ENST00000444588 RBM17Q96I25 401 aaKnown RBP29.02■■■□□ 2.24
NEURL3-203ENST00000444588 TRMT112Q9UI30 125 aaKnown RBP29.02■■■□□ 2.24
NEURL3-203ENST00000444588 FKBP4Q02790 459 aaKnown RBP eCLIP29.01■■■□□ 2.23
NEURL3-203ENST00000444588 TWISTNBQ3B726 338 aaPredicted RBP29.01■■■□□ 2.23
NEURL3-203ENST00000444588 OLFM4Q6UX06 510 aa29.01■■■□□ 2.23
NEURL3-203ENST00000444588 RTKN2Q8IZC4 609 aa29.01■■■□□ 2.23
NEURL3-203ENST00000444588 CACNA1FO60840 1977 aa29.01■■■□□ 2.23
NEURL3-203ENST00000444588 WDR90Q96KV7 1748 aa29■■■□□ 2.23
NEURL3-203ENST00000444588 GLTPD2A6NH11 291 aa29■■■□□ 2.23
NEURL3-203ENST00000444588 CC2D2BQ6DHV5 1058 aa29■■■□□ 2.23
NEURL3-203ENST00000444588 SYNE4Q8N205 404 aa29■■■□□ 2.23
NEURL3-203ENST00000444588 ATP5J2-PTCD1G3V325 749 aa28.98■■■□□ 2.23
NEURL3-203ENST00000444588 HCLS1P14317 486 aaPredicted RBP28.98■■■□□ 2.23
NEURL3-203ENST00000444588 RIC3Q7Z5B4 369 aa28.98■■■□□ 2.23
NEURL3-203ENST00000444588 PSMD1Q99460 953 aa28.97■■■□□ 2.23
NEURL3-203ENST00000444588 SALL2Q9Y467 1007 aaPredicted RBP28.97■■■□□ 2.23
NEURL3-203ENST00000444588 ZNF521Q96K83 1311 aa28.96■■■□□ 2.23
NEURL3-203ENST00000444588 TOMM70O94826 608 aa28.96■■■□□ 2.23
NEURL3-203ENST00000444588 GRIPAP1Q4V328 841 aa28.96■■■□□ 2.23
NEURL3-203ENST00000444588 SPINK5Q9NQ38 1064 aaPredicted RBP28.96■■■□□ 2.23
NEURL3-203ENST00000444588 ABCC4O15439 1325 aa28.95■■■□□ 2.23
NEURL3-203ENST00000444588 DDX58O95786 925 aaKnown RBP28.95■■■□□ 2.22
NEURL3-203ENST00000444588 STK31Q9BXU1 1019 aa28.95■■■□□ 2.22
NEURL3-203ENST00000444588 PPEF1O14829 653 aaPredicted RBP28.94■■■□□ 2.22
NEURL3-203ENST00000444588 LRRC37AA6NMS7 1700 aa28.94■■■□□ 2.22
NEURL3-203ENST00000444588 FAM89AQ96GI7 184 aa28.93■■■□□ 2.22
NEURL3-203ENST00000444588 METTL22Q9BUU2 404 aaPredicted RBP28.93■■■□□ 2.22
NEURL3-203ENST00000444588 TAF1P21675 1872 aa28.92■■■□□ 2.22
NEURL3-203ENST00000444588 VAMP4O75379 141 aa28.92■■■□□ 2.22
NEURL3-203ENST00000444588 CCDC191Q8NCU4 936 aa28.92■■■□□ 2.22
NEURL3-203ENST00000444588 RRAGCQ9HB90 399 aa28.92■■■□□ 2.22
NEURL3-203ENST00000444588 ZNF277Q9NRM2 450 aaPredicted RBP28.92■■■□□ 2.22
NEURL3-203ENST00000444588 ATP6V0A2Q9Y487 856 aa28.92■■■□□ 2.22
NEURL3-203ENST00000444588 SF3B3Q15393 1217 aaKnown RBP28.91■■■□□ 2.22
NEURL3-203ENST00000444588 KSR2Q6VAB6 950 aa28.91■■■□□ 2.22
NEURL3-203ENST00000444588 SLC51AQ86UW1 340 aa28.91■■■□□ 2.22
NEURL3-203ENST00000444588 ZBTB38Q8NAP3 1195 aaPredicted RBP28.91■■■□□ 2.22
NEURL3-203ENST00000444588 RBM46Q8TBY0 533 aaKnown RBP28.91■■■□□ 2.22
NEURL3-203ENST00000444588 MYD88Q99836 296 aa28.91■■■□□ 2.22
NEURL3-203ENST00000444588 COL4A5P29400 1685 aa28.9■■■□□ 2.22
NEURL3-203ENST00000444588 IARSP41252 1262 aaKnown RBP28.9■■■□□ 2.22
NEURL3-203ENST00000444588 DPY19L2Q6NUT2 758 aa28.9■■■□□ 2.22
NEURL3-203ENST00000444588 POTECB2RU33 542 aa28.89■■■□□ 2.22
NEURL3-203ENST00000444588 BBOX1O75936 387 aa28.89■■■□□ 2.22
NEURL3-203ENST00000444588 SLC4A2P04920 1241 aa28.89■■■□□ 2.22
NEURL3-203ENST00000444588 EXOSC9Q06265 439 aaKnown RBP28.89■■■□□ 2.22
NEURL3-203ENST00000444588 GRAPQ13588 217 aa28.89■■■□□ 2.22
NEURL3-203ENST00000444588 G2E3Q7L622 706 aa28.89■■■□□ 2.22
NEURL3-203ENST00000444588 GRAPLQ8TC17 118 aaPredicted RBP28.89■■■□□ 2.22
NEURL3-203ENST00000444588 MYH16Q9H6N6 1097 aa28.89■■■□□ 2.22
NEURL3-203ENST00000444588 MAP3K2Q9Y2U5 619 aa28.89■■■□□ 2.22
NEURL3-203ENST00000444588 PI4KAP2A4QPH2 592 aa28.88■■■□□ 2.21
NEURL3-203ENST00000444588 CCER2I3L3R5 266 aa28.88■■■□□ 2.21
NEURL3-203ENST00000444588 TCERG1O14776 1098 aaKnown RBP28.88■■■□□ 2.21
NEURL3-203ENST00000444588 DDX46Q7L014 1031 aaKnown RBP28.88■■■□□ 2.21
NEURL3-203ENST00000444588 PI4KAP1Q8N8J0 262 aa28.88■■■□□ 2.21
NEURL3-203ENST00000444588 ZNF428Q96B54 188 aa28.88■■■□□ 2.21
NEURL3-203ENST00000444588 COL4A1P02462 1669 aa28.87■■■□□ 2.21
NEURL3-203ENST00000444588 IRS4O14654 1257 aaPredicted RBP28.87■■■□□ 2.21
NEURL3-203ENST00000444588 PCCAP05165 728 aaPredicted RBP28.87■■■□□ 2.21
NEURL3-203ENST00000444588 VEGFAP15692 232 aaPredicted RBP28.87■■■□□ 2.21
NEURL3-203ENST00000444588 HSPA6P17066 643 aa28.87■■■□□ 2.21
NEURL3-203ENST00000444588 CWC25Q9NXE8 425 aaPredicted RBP28.87■■■□□ 2.21
NEURL3-203ENST00000444588 CEP350Q5VT06 3117 aa28.86■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms