RNA–Protein interactions for RNA: ENST00000444315.6

TSPAN9-204, Transcript of tetraspanin 9, humanhuman

TSL 4

Gene TSPAN9, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-204ENST00000444315 C16orf71Q8IYS4 520 aaPredicted RBP21.6■■□□□ 1.05
TSPAN9-204ENST00000444315 PLBD2Q8NHP8 589 aa21.6■■□□□ 1.05
TSPAN9-204ENST00000444315 ZNF428Q96B54 188 aa21.6■■□□□ 1.05
TSPAN9-204ENST00000444315 TAOK3Q9H2K8 898 aa21.6■■□□□ 1.05
TSPAN9-204ENST00000444315 TRMT112Q9UI30 125 aaKnown RBP21.6■■□□□ 1.05
TSPAN9-204ENST00000444315 TIAM2Q8IVF5 1701 aa21.6■■□□□ 1.05
TSPAN9-204ENST00000444315 NTSR2O95665 410 aa21.59■■□□□ 1.05
TSPAN9-204ENST00000444315 CCDC93Q567U6 631 aa21.59■■□□□ 1.05
TSPAN9-204ENST00000444315 LRP10Q7Z4F1 713 aa21.59■■□□□ 1.05
TSPAN9-204ENST00000444315 C8orf58Q8NAV2 365 aa21.59■■□□□ 1.05
TSPAN9-204ENST00000444315 RBM17Q96I25 401 aaKnown RBP21.59■■□□□ 1.05
TSPAN9-204ENST00000444315 NLRP3Q96P20 1036 aa21.59■■□□□ 1.05
TSPAN9-204ENST00000444315 DDX58O95786 925 aaKnown RBP21.58■■□□□ 1.05
TSPAN9-204ENST00000444315 C1QTNF8P60827 252 aa21.58■■□□□ 1.05
TSPAN9-204ENST00000444315 TCIRG1Q13488 830 aa21.58■■□□□ 1.05
TSPAN9-204ENST00000444315 IL16Q14005 1332 aa21.56■■□□□ 1.04
TSPAN9-204ENST00000444315 FER1L6Q2WGJ9 1857 aa21.56■■□□□ 1.04
TSPAN9-204ENST00000444315 ATP5J2-PTCD1G3V325 749 aa21.56■■□□□ 1.04
TSPAN9-204ENST00000444315 NFKBIEO00221 500 aa21.56■■□□□ 1.04
TSPAN9-204ENST00000444315 TCERG1O14776 1098 aaKnown RBP21.56■■□□□ 1.04
TSPAN9-204ENST00000444315 TWISTNBQ3B726 338 aaPredicted RBP21.56■■□□□ 1.04
TSPAN9-204ENST00000444315 NLRP10Q86W26 655 aa21.56■■□□□ 1.04
TSPAN9-204ENST00000444315 RNF123Q5XPI4 1314 aa21.55■■□□□ 1.04
TSPAN9-204ENST00000444315 SH3TC1Q8TE82 1336 aa21.55■■□□□ 1.04
TSPAN9-204ENST00000444315 PHAXQ9H814 394 aaKnown RBP21.54■■□□□ 1.04
TSPAN9-204ENST00000444315 KLRG2A4D1S0 409 aaPredicted RBP21.53■■□□□ 1.04
TSPAN9-204ENST00000444315 HCLS1P14317 486 aaPredicted RBP21.53■■□□□ 1.04
TSPAN9-204ENST00000444315 RTL5Q5HYW3 569 aaPredicted RBP21.53■■□□□ 1.04
TSPAN9-204ENST00000444315 WDR63Q8IWG1 891 aa21.53■■□□□ 1.04
TSPAN9-204ENST00000444315 RTKN2Q8IZC4 609 aa21.53■■□□□ 1.04
TSPAN9-204ENST00000444315 TSPYL6Q8N831 410 aa21.53■■□□□ 1.04
TSPAN9-204ENST00000444315 MYD88Q99836 296 aa21.53■■□□□ 1.04
TSPAN9-204ENST00000444315 MYH16Q9H6N6 1097 aa21.53■■□□□ 1.04
TSPAN9-204ENST00000444315 RIC1Q4ADV7 1423 aa21.53■■□□□ 1.04
TSPAN9-204ENST00000444315 FANCIQ9NVI1 1328 aa21.53■■□□□ 1.04
TSPAN9-204ENST00000444315 ZC3H4Q9UPT8 1303 aaKnown RBP21.53■■□□□ 1.04
TSPAN9-204ENST00000444315 PPEF1O14829 653 aaPredicted RBP21.52■■□□□ 1.04
TSPAN9-204ENST00000444315 NCBP3Q53F19 620 aaKnown RBP21.52■■□□□ 1.04
TSPAN9-204ENST00000444315 DPY19L2Q6NUT2 758 aa21.52■■□□□ 1.04
TSPAN9-204ENST00000444315 NMRK2Q9NPI5 230 aa21.52■■□□□ 1.04
TSPAN9-204ENST00000444315 DICER1Q9UPY3 1922 aaKnown RBP21.51■■□□□ 1.03
TSPAN9-204ENST00000444315 CRY2Q49AN0 593 aa21.51■■□□□ 1.03
TSPAN9-204ENST00000444315 DDX46Q7L014 1031 aaKnown RBP21.51■■□□□ 1.03
TSPAN9-204ENST00000444315 FKBP4Q02790 459 aaKnown RBP eCLIP21.5■■□□□ 1.03
TSPAN9-204ENST00000444315 NEXNQ0ZGT2 675 aa21.5■■□□□ 1.03
TSPAN9-204ENST00000444315 LAMB2P55268 1798 aa21.5■■□□□ 1.03
TSPAN9-204ENST00000444315 OLFM4Q6UX06 510 aa21.49■■□□□ 1.03
TSPAN9-204ENST00000444315 FAM89AQ96GI7 184 aa21.49■■□□□ 1.03
TSPAN9-204ENST00000444315 RRAGCQ9HB90 399 aa21.49■■□□□ 1.03
TSPAN9-204ENST00000444315 ZNF277Q9NRM2 450 aaPredicted RBP21.49■■□□□ 1.03
TSPAN9-204ENST00000444315 LTBP3Q9NS15 1303 aa21.49■■□□□ 1.03
TSPAN9-204ENST00000444315 HSP90B1P14625 803 aaKnown RBP21.48■■□□□ 1.03
TSPAN9-204ENST00000444315 C3orf67Q6ZVT6 689 aa21.48■■□□□ 1.03
TSPAN9-204ENST00000444315 CRAMP1Q96RY5 1269 aa21.48■■□□□ 1.03
TSPAN9-204ENST00000444315 SLC4A2P04920 1241 aa21.47■■□□□ 1.03
TSPAN9-204ENST00000444315 EXOSC9Q06265 439 aaKnown RBP21.47■■□□□ 1.03
TSPAN9-204ENST00000444315 CC2D2BQ6DHV5 1058 aa21.47■■□□□ 1.03
TSPAN9-204ENST00000444315 SYNE4Q8N205 404 aa21.47■■□□□ 1.03
TSPAN9-204ENST00000444315 ISCA1Q9BUE6 129 aa21.47■■□□□ 1.03
TSPAN9-204ENST00000444315 MAP3K2Q9Y2U5 619 aa21.47■■□□□ 1.03
TSPAN9-204ENST00000444315 GLTPD2A6NH11 291 aa21.46■■□□□ 1.03
TSPAN9-204ENST00000444315 KIF3CO14782 793 aa21.46■■□□□ 1.03
TSPAN9-204ENST00000444315 HOXA10P31260 410 aaPredicted RBP21.46■■□□□ 1.03
TSPAN9-204ENST00000444315 PRELPP51888 382 aa21.46■■□□□ 1.03
TSPAN9-204ENST00000444315 SLC10A5Q5PT55 438 aa21.46■■□□□ 1.03
TSPAN9-204ENST00000444315 CWC25Q9NXE8 425 aaPredicted RBP21.46■■□□□ 1.03
TSPAN9-204ENST00000444315 ABCC4O15439 1325 aa21.46■■□□□ 1.03
TSPAN9-204ENST00000444315 IRS4O14654 1257 aaPredicted RBP21.45■■□□□ 1.02
TSPAN9-204ENST00000444315 FKBP5Q13451 457 aaPredicted RBP21.45■■□□□ 1.02
TSPAN9-204ENST00000444315 JDP2Q8WYK2 163 aa21.45■■□□□ 1.02
TSPAN9-204ENST00000444315 DDX60Q8IY21 1712 aaKnown RBP21.45■■□□□ 1.02
TSPAN9-204ENST00000444315 GRIPAP1Q4V328 841 aa21.44■■□□□ 1.02
TSPAN9-204ENST00000444315 C7orf43Q8WVR3 580 aa21.44■■□□□ 1.02
TSPAN9-204ENST00000444315 METTL22Q9BUU2 404 aaPredicted RBP21.44■■□□□ 1.02
TSPAN9-204ENST00000444315 CACNA1FO60840 1977 aa21.43■■□□□ 1.02
TSPAN9-204ENST00000444315 PI4KAP2A4QPH2 592 aa21.43■■□□□ 1.02
TSPAN9-204ENST00000444315 TOMM70O94826 608 aa21.43■■□□□ 1.02
TSPAN9-204ENST00000444315 IARSP41252 1262 aaKnown RBP21.43■■□□□ 1.02
TSPAN9-204ENST00000444315 KSR2Q6VAB6 950 aa21.43■■□□□ 1.02
TSPAN9-204ENST00000444315 PI4KAP1Q8N8J0 262 aa21.43■■□□□ 1.02
TSPAN9-204ENST00000444315 CCDC191Q8NCU4 936 aa21.43■■□□□ 1.02
TSPAN9-204ENST00000444315 GRAPQ13588 217 aa21.42■■□□□ 1.02
TSPAN9-204ENST00000444315 ZBTB38Q8NAP3 1195 aaPredicted RBP21.42■■□□□ 1.02
TSPAN9-204ENST00000444315 GRAPLQ8TC17 118 aaPredicted RBP21.42■■□□□ 1.02
TSPAN9-204ENST00000444315 BBOX1O75936 387 aa21.41■■□□□ 1.02
TSPAN9-204ENST00000444315 VEGFAP15692 232 aaPredicted RBP21.41■■□□□ 1.02
TSPAN9-204ENST00000444315 FLIIQ13045 1269 aa21.41■■□□□ 1.02
TSPAN9-204ENST00000444315 TRIM28Q13263 835 aaKnown RBP21.41■■□□□ 1.02
TSPAN9-204ENST00000444315 DPP8Q6V1X1 898 aaPredicted RBP21.41■■□□□ 1.02
TSPAN9-204ENST00000444315 LARGE2Q8N3Y3 721 aa21.41■■□□□ 1.02
TSPAN9-204ENST00000444315 CCER2I3L3R5 266 aa21.4■■□□□ 1.02
TSPAN9-204ENST00000444315 SUPT20HQ8NEM7 779 aa21.4■■□□□ 1.02
TSPAN9-204ENST00000444315 JARID2Q92833 1246 aaPredicted RBP21.4■■□□□ 1.02
TSPAN9-204ENST00000444315 PSMD1Q99460 953 aa21.4■■□□□ 1.02
TSPAN9-204ENST00000444315 ATP6V0A2Q9Y487 856 aa21.4■■□□□ 1.02
TSPAN9-204ENST00000444315 TAF1P21675 1872 aa21.4■■□□□ 1.02
TSPAN9-204ENST00000444315 PPIP5K2O43314 1243 aa21.39■■□□□ 1.01
TSPAN9-204ENST00000444315 EIF6P56537 245 aaKnown RBP21.39■■□□□ 1.01
TSPAN9-204ENST00000444315 G2E3Q7L622 706 aa21.39■■□□□ 1.01
TSPAN9-204ENST00000444315 NIM1KQ8IY84 436 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms