RNA–Protein interactions for RNA: ENST00000442653.1

TOP3B-209, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 400 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-209ENST00000442653 ADAMTSL1Q8N6G6 1762 aa11.05□□□□□ -0.64
TOP3B-209ENST00000442653 FZD9O00144 591 aa11.04□□□□□ -0.64
TOP3B-209ENST00000442653 ITGBL1O95965 494 aaPredicted RBP11.04□□□□□ -0.64
TOP3B-209ENST00000442653 ALDH1B1P30837 517 aa11.04□□□□□ -0.64
TOP3B-209ENST00000442653 IARSP41252 1262 aaKnown RBP11.04□□□□□ -0.64
TOP3B-209ENST00000442653 C3orf67Q6ZVT6 689 aa11.04□□□□□ -0.64
TOP3B-209ENST00000442653 SYNE4Q8N205 404 aa11.04□□□□□ -0.64
TOP3B-209ENST00000442653 PNISRQ8TF01 805 aaKnown RBP11.04□□□□□ -0.64
TOP3B-209ENST00000442653 NYXQ9GZU5 481 aa11.04□□□□□ -0.64
TOP3B-209ENST00000442653 HACL1Q9UJ83 578 aa11.04□□□□□ -0.64
TOP3B-209ENST00000442653 RNF123Q5XPI4 1314 aa11.04□□□□□ -0.64
TOP3B-209ENST00000442653 CNTNAP1P78357 1384 aa11.03□□□□□ -0.64
TOP3B-209ENST00000442653 IBTKQ9P2D0 1353 aaPredicted RBP11.03□□□□□ -0.64
TOP3B-209ENST00000442653 RIC1Q4ADV7 1423 aa11.03□□□□□ -0.64
TOP3B-209ENST00000442653 NEFMP07197 916 aa11.03□□□□□ -0.64
TOP3B-209ENST00000442653 HOXA10P31260 410 aaPredicted RBP11.03□□□□□ -0.64
TOP3B-209ENST00000442653 EPHX2P34913 555 aa11.03□□□□□ -0.64
TOP3B-209ENST00000442653 EAPPQ56P03 285 aaPredicted RBP11.03□□□□□ -0.64
TOP3B-209ENST00000442653 SUSD4Q5VX71 490 aa11.03□□□□□ -0.64
TOP3B-209ENST00000442653 KIF6Q6ZMV9 814 aa11.03□□□□□ -0.64
TOP3B-209ENST00000442653 LRP10Q7Z4F1 713 aa11.03□□□□□ -0.64
TOP3B-209ENST00000442653 PSMD1Q99460 953 aa11.03□□□□□ -0.64
TOP3B-209ENST00000442653 NTSR2O95665 410 aa11.02□□□□□ -0.65
TOP3B-209ENST00000442653 MAP1SQ66K74 1059 aaPredicted RBP11.02□□□□□ -0.65
TOP3B-209ENST00000442653 ZNF34Q8IZ26 560 aa11.02□□□□□ -0.65
TOP3B-209ENST00000442653 GPC2Q8N158 579 aa11.02□□□□□ -0.65
TOP3B-209ENST00000442653 RPGRQ92834 1020 aaKnown RBP11.02□□□□□ -0.65
TOP3B-209ENST00000442653 LTBP1Q14766 1721 aa11.01□□□□□ -0.65
TOP3B-209ENST00000442653 VEGFBP49765 207 aa11.01□□□□□ -0.65
TOP3B-209ENST00000442653 PDIA6Q15084 440 aa11.01□□□□□ -0.65
TOP3B-209ENST00000442653 PROSER3Q2NL68 480 aa11.01□□□□□ -0.65
TOP3B-209ENST00000442653 MAPK8IP3Q9UPT6 1336 aa11.01□□□□□ -0.65
TOP3B-209ENST00000442653 TMEM88BA6NKF7 163 aa11□□□□□ -0.65
TOP3B-209ENST00000442653 TCERG1O14776 1098 aaKnown RBP11□□□□□ -0.65
TOP3B-209ENST00000442653 FOXN1O15353 648 aa11□□□□□ -0.65
TOP3B-209ENST00000442653 ANXA1P04083 346 aa11□□□□□ -0.65
TOP3B-209ENST00000442653 CC2D2BQ6DHV5 1058 aa11□□□□□ -0.65
TOP3B-209ENST00000442653 GIGYF2Q6Y7W6 1299 aaKnown RBP11□□□□□ -0.65
TOP3B-209ENST00000442653 PNMA8AQ86V59 439 aaPredicted RBP11□□□□□ -0.65
TOP3B-209ENST00000442653 CNTROBQ8N137 903 aa11□□□□□ -0.65
TOP3B-209ENST00000442653 JDP2Q8WYK2 163 aa11□□□□□ -0.65
TOP3B-209ENST00000442653 CRAMP1Q96RY5 1269 aa11□□□□□ -0.65
TOP3B-209ENST00000442653 TSPYL4Q9UJ04 414 aa11□□□□□ -0.65
TOP3B-209ENST00000442653 CLEC11AQ9Y240 323 aa11□□□□□ -0.65
TOP3B-209ENST00000442653 GJA3Q9Y6H8 435 aa11□□□□□ -0.65
TOP3B-209ENST00000442653 ERBB4Q15303 1308 aa11□□□□□ -0.65
TOP3B-209ENST00000442653 PPEF1O14829 653 aaPredicted RBP10.99□□□□□ -0.65
TOP3B-209ENST00000442653 SCNN1DP51172 638 aa10.99□□□□□ -0.65
TOP3B-209ENST00000442653 RBM17Q96I25 401 aaKnown RBP10.99□□□□□ -0.65
TOP3B-209ENST00000442653 EIF2S2P20042 333 aaKnown RBP10.98□□□□□ -0.65
TOP3B-209ENST00000442653 EPS15P42566 896 aa10.98□□□□□ -0.65
TOP3B-209ENST00000442653 RIPK4P57078 832 aa10.98□□□□□ -0.65
TOP3B-209ENST00000442653 LARGE2Q8N3Y3 721 aa10.98□□□□□ -0.65
TOP3B-209ENST00000442653 RASSF10A6NK89 507 aa10.97□□□□□ -0.65
TOP3B-209ENST00000442653 EIF6P56537 245 aaKnown RBP10.97□□□□□ -0.65
TOP3B-209ENST00000442653 FMR1Q06787 632 aaKnown RBP eCLIP10.97□□□□□ -0.65
TOP3B-209ENST00000442653 PARP10Q53GL7 1025 aa10.97□□□□□ -0.65
TOP3B-209ENST00000442653 SLC10A5Q5PT55 438 aa10.97□□□□□ -0.65
TOP3B-209ENST00000442653 PPP1R42Q7Z4L9 355 aa10.97□□□□□ -0.65
TOP3B-209ENST00000442653 UTP14AQ9BVJ6 771 aaKnown RBP10.97□□□□□ -0.65
TOP3B-209ENST00000442653 PNNQ9H307 717 aaKnown RBP10.97□□□□□ -0.65
TOP3B-209ENST00000442653 ATP6V0A2Q9Y487 856 aa10.97□□□□□ -0.65
TOP3B-209ENST00000442653 ABCC4O15439 1325 aa10.97□□□□□ -0.65
TOP3B-209ENST00000442653 LAMB2P55268 1798 aa10.96□□□□□ -0.65
TOP3B-209ENST00000442653 PPIP5K2O43314 1243 aa10.96□□□□□ -0.65
TOP3B-209ENST00000442653 TMPOP42166 694 aaKnown RBP10.96□□□□□ -0.65
TOP3B-209ENST00000442653 AOC3Q16853 763 aa10.96□□□□□ -0.65
TOP3B-209ENST00000442653 KRT24Q2M2I5 525 aa10.96□□□□□ -0.65
TOP3B-209ENST00000442653 GRIPAP1Q4V328 841 aa10.96□□□□□ -0.65
TOP3B-209ENST00000442653 NIM1KQ8IY84 436 aa10.96□□□□□ -0.65
TOP3B-209ENST00000442653 NECTIN2Q92692 538 aa10.96□□□□□ -0.65
TOP3B-209ENST00000442653 NLRP3Q96P20 1036 aa10.96□□□□□ -0.65
TOP3B-209ENST00000442653 DDX21Q9NR30 783 aaKnown RBP eCLIP10.96□□□□□ -0.65
TOP3B-209ENST00000442653 WBP1LQ9NX94 342 aa10.96□□□□□ -0.65
TOP3B-209ENST00000442653 ANKRD36CQ5JPF3 1778 aa10.95□□□□□ -0.66
TOP3B-209ENST00000442653 TRAF5O00463 557 aa10.95□□□□□ -0.66
TOP3B-209ENST00000442653 HCLS1P14317 486 aaPredicted RBP10.95□□□□□ -0.66
TOP3B-209ENST00000442653 LMOD1P29536 600 aaPredicted RBP10.95□□□□□ -0.66
TOP3B-209ENST00000442653 CTCFP49711 727 aaPredicted RBP10.95□□□□□ -0.66
TOP3B-209ENST00000442653 COPS6Q7L5N1 327 aa10.95□□□□□ -0.66
TOP3B-209ENST00000442653 NLRP10Q86W26 655 aa10.95□□□□□ -0.66
TOP3B-209ENST00000442653 XAGE3Q8WTP9 111 aa10.95□□□□□ -0.66
TOP3B-209ENST00000442653 ZNF428Q96B54 188 aa10.95□□□□□ -0.66
TOP3B-209ENST00000442653 PRDM10Q9NQV6 1147 aa10.95□□□□□ -0.66
TOP3B-209ENST00000442653 BABAM1Q9NWV8 329 aa10.95□□□□□ -0.66
TOP3B-209ENST00000442653 ABT1Q9ULW3 272 aaKnown RBP10.95□□□□□ -0.66
TOP3B-209ENST00000442653 LBX1P52954 281 aa10.94□□□□□ -0.66
TOP3B-209ENST00000442653 CXCL9Q07325 125 aa10.94□□□□□ -0.66
TOP3B-209ENST00000442653 AIMP1Q12904 312 aaKnown RBP10.94□□□□□ -0.66
TOP3B-209ENST00000442653 RALBP1Q15311 655 aa10.94□□□□□ -0.66
TOP3B-209ENST00000442653 DEFB115Q30KQ5 88 aa10.94□□□□□ -0.66
TOP3B-209ENST00000442653 CCDC146Q8IYE0 955 aa10.94□□□□□ -0.66
TOP3B-209ENST00000442653 AIDAQ96BJ3 306 aa10.94□□□□□ -0.66
TOP3B-209ENST00000442653 RTFDC1Q9BY42 306 aaPredicted RBP10.94□□□□□ -0.66
TOP3B-209ENST00000442653 GPRC5DQ9NZD1 345 aa10.94□□□□□ -0.66
TOP3B-209ENST00000442653 DUOX1Q9NRD9 1551 aa10.94□□□□□ -0.66
TOP3B-209ENST00000442653 TAF1P21675 1872 aa10.93□□□□□ -0.66
TOP3B-209ENST00000442653 WDR33Q9C0J8 1336 aaKnown RBP10.93□□□□□ -0.66
TOP3B-209ENST00000442653 CHL1O00533 1208 aa10.93□□□□□ -0.66
TOP3B-209ENST00000442653 ATXN8OSP0DMR3 200 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms