RNA–Protein interactions for RNA: ENST00000442218.2

SLC48A1-201, Transcript of solute carrier family 48 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC48A1, Length 3,010 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-201ENST00000442218 INTS4Q96HW7 963 aaKnown RBP15.73■□□□□ 0.11
SLC48A1-201ENST00000442218 MED1Q15648 1581 aaPredicted RBP15.73■□□□□ 0.11
SLC48A1-201ENST00000442218 ALS2Q96Q42 1657 aa15.73■□□□□ 0.11
SLC48A1-201ENST00000442218 F13A1P00488 732 aa15.73■□□□□ 0.11
SLC48A1-201ENST00000442218 BRINP3Q76B58 766 aa15.73■□□□□ 0.11
SLC48A1-201ENST00000442218 NLRP2Q9NX02 1062 aa15.73■□□□□ 0.11
SLC48A1-201ENST00000442218 FBXW7Q969H0 707 aa15.73■□□□□ 0.11
SLC48A1-201ENST00000442218 TTC14Q96N46 770 aa15.73■□□□□ 0.11
SLC48A1-201ENST00000442218 NPHP3Q7Z494 1330 aa15.72■□□□□ 0.11
SLC48A1-201ENST00000442218 A0A087WWV3 80 aa15.72■□□□□ 0.11
SLC48A1-201ENST00000442218 ZNF500O60304 480 aaPredicted RBP15.72■□□□□ 0.11
SLC48A1-201ENST00000442218 ST3GAL1Q11201 340 aa15.72■□□□□ 0.11
SLC48A1-201ENST00000442218 HYPKQ9NX55 129 aa15.72■□□□□ 0.11
SLC48A1-201ENST00000442218 ADCY9O60503 1353 aa15.72■□□□□ 0.11
SLC48A1-201ENST00000442218 KIAA2012Q0VF49 1180 aa15.71■□□□□ 0.11
SLC48A1-201ENST00000442218 C1orf141Q5JVX7 400 aa15.71■□□□□ 0.11
SLC48A1-201ENST00000442218 CDC37L1Q7L3B6 337 aa15.71■□□□□ 0.11
SLC48A1-201ENST00000442218 RAB11FIP3O75154 756 aa15.71■□□□□ 0.11
SLC48A1-201ENST00000442218 NMIQ13287 307 aaPredicted RBP15.71■□□□□ 0.11
SLC48A1-201ENST00000442218 POLA2Q14181 598 aa15.71■□□□□ 0.11
SLC48A1-201ENST00000442218 TPCN1Q9ULQ1 816 aa15.71■□□□□ 0.11
SLC48A1-201ENST00000442218 RBM8AQ9Y5S9 174 aaKnown RBP15.71■□□□□ 0.11
SLC48A1-201ENST00000442218 CCDC183Q5T5S1 534 aa15.7■□□□□ 0.1
SLC48A1-201ENST00000442218 NFATC2IPQ8NCF5 419 aa15.7■□□□□ 0.1
SLC48A1-201ENST00000442218 RNMTO43148 476 aaKnown RBP15.7■□□□□ 0.1
SLC48A1-201ENST00000442218 CCDC129Q6ZRS4 1044 aa15.7■□□□□ 0.1
SLC48A1-201ENST00000442218 EAF2Q96CJ1 260 aaPredicted RBP15.7■□□□□ 0.1
SLC48A1-201ENST00000442218 PKNOX2Q96KN3 472 aa15.7■□□□□ 0.1
SLC48A1-201ENST00000442218 BICC1Q9H694 974 aaKnown RBP15.7■□□□□ 0.1
SLC48A1-201ENST00000442218 NAP1L2Q9ULW6 460 aaPredicted RBP15.7■□□□□ 0.1
SLC48A1-201ENST00000442218 RGPD5Q99666 1765 aa15.7■□□□□ 0.1
SLC48A1-201ENST00000442218 A0A0D9SFI3 127 aa15.7■□□□□ 0.1
SLC48A1-201ENST00000442218 SUCLG2Q96I99 432 aa15.7■□□□□ 0.1
SLC48A1-201ENST00000442218 FSD1Q9BTV5 496 aa15.7■□□□□ 0.1
SLC48A1-201ENST00000442218 SLAIN2Q9P270 581 aa15.7■□□□□ 0.1
SLC48A1-201ENST00000442218 MTMR6Q9Y217 621 aa15.7■□□□□ 0.1
SLC48A1-201ENST00000442218 PHRF1Q9P1Y6 1649 aaKnown RBP15.7■□□□□ 0.1
SLC48A1-201ENST00000442218 LARP1BQ659C4 914 aaKnown RBP15.69■□□□□ 0.1
SLC48A1-201ENST00000442218 PDCL3Q9H2J4 239 aa15.69■□□□□ 0.1
SLC48A1-201ENST00000442218 GIGYF1O75420 1035 aaPredicted RBP15.69■□□□□ 0.1
SLC48A1-201ENST00000442218 LIG1P18858 919 aa15.69■□□□□ 0.1
SLC48A1-201ENST00000442218 CYP46A1Q9Y6A2 500 aa15.69■□□□□ 0.1
SLC48A1-201ENST00000442218 ATP5J2-PTCD1G3V325 749 aa15.68■□□□□ 0.1
SLC48A1-201ENST00000442218 PTCD1O75127 700 aaKnown RBP15.68■□□□□ 0.1
SLC48A1-201ENST00000442218 ZNF589Q86UQ0 364 aaPredicted RBP15.68■□□□□ 0.1
SLC48A1-201ENST00000442218 LUZP1Q86V48 1076 aa15.68■□□□□ 0.1
SLC48A1-201ENST00000442218 ECHDC1Q9NTX5 307 aa15.68■□□□□ 0.1
SLC48A1-201ENST00000442218 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.68■□□□□ 0.1
SLC48A1-201ENST00000442218 SPATA31A3Q5VYP0 1347 aa15.68■□□□□ 0.1
SLC48A1-201ENST00000442218 HTATSF1O43719 755 aaKnown RBP15.68■□□□□ 0.1
SLC48A1-201ENST00000442218 GLRX3O76003 335 aaKnown RBP15.68■□□□□ 0.1
SLC48A1-201ENST00000442218 SEC62Q99442 399 aaKnown RBP15.68■□□□□ 0.1
SLC48A1-201ENST00000442218 TNS3Q68CZ2 1445 aa15.68■□□□□ 0.1
SLC48A1-201ENST00000442218 KAZALD1Q96I82 304 aa15.68■□□□□ 0.1
SLC48A1-201ENST00000442218 PYCARDQ9ULZ3 195 aa15.68■□□□□ 0.1
SLC48A1-201ENST00000442218 PHF14O94880 888 aa15.67■□□□□ 0.1
SLC48A1-201ENST00000442218 SASH1O94885 1247 aa15.67■□□□□ 0.1
SLC48A1-201ENST00000442218 CSB-PGBD3P0DP91 1061 aa15.67■□□□□ 0.1
SLC48A1-201ENST00000442218 UBE2HP62256 183 aa15.67■□□□□ 0.1
SLC48A1-201ENST00000442218 PLEKHO1Q53GL0 409 aaPredicted RBP15.67■□□□□ 0.1
SLC48A1-201ENST00000442218 EPHA10Q5JZY3 1008 aa15.67■□□□□ 0.1
SLC48A1-201ENST00000442218 CREB3L3Q68CJ9 461 aa15.67■□□□□ 0.1
SLC48A1-201ENST00000442218 TTC6Q86TZ1 520 aa15.67■□□□□ 0.1
SLC48A1-201ENST00000442218 CEMIPQ8WUJ3 1361 aa15.67■□□□□ 0.1
SLC48A1-201ENST00000442218 JAK2O60674 1132 aa15.67■□□□□ 0.1
SLC48A1-201ENST00000442218 NOLC1Q14978 699 aaKnown RBP eCLIP15.67■□□□□ 0.1
SLC48A1-201ENST00000442218 HS1BP3Q53T59 392 aa15.67■□□□□ 0.1
SLC48A1-201ENST00000442218 DNAJC2Q99543 621 aaKnown RBP15.67■□□□□ 0.1
SLC48A1-201ENST00000442218 AKAP4Q5JQC9 854 aa15.66■□□□□ 0.1
SLC48A1-201ENST00000442218 ERCC4Q92889 916 aaPredicted RBP15.66■□□□□ 0.1
SLC48A1-201ENST00000442218 USP16Q9Y5T5 823 aa15.66■□□□□ 0.1
SLC48A1-201ENST00000442218 ERBB3P21860 1342 aa15.66■□□□□ 0.1
SLC48A1-201ENST00000442218 G3BP1Q13283 466 aaKnown RBP eCLIP15.65■□□□□ 0.1
SLC48A1-201ENST00000442218 LARP1Q6PKG0 1096 aaKnown RBP15.65■□□□□ 0.1
SLC48A1-201ENST00000442218 ZKSCAN1P17029 563 aaPredicted RBP15.65■□□□□ 0.1
SLC48A1-201ENST00000442218 RIC3Q7Z5B4 369 aa15.65■□□□□ 0.1
SLC48A1-201ENST00000442218 SASS6Q6UVJ0 657 aa15.65■□□□□ 0.1
SLC48A1-201ENST00000442218 DRC7Q8IY82 874 aa15.65■□□□□ 0.1
SLC48A1-201ENST00000442218 FTOQ9C0B1 505 aaKnown RBP eCLIP15.65■□□□□ 0.12e-6■■□□□ 11.5
SLC48A1-201ENST00000442218 DBF4Q9UBU7 674 aaPredicted RBP15.65■□□□□ 0.1
SLC48A1-201ENST00000442218 CCDC171Q6TFL3 1326 aa15.64■□□□□ 0.09
SLC48A1-201ENST00000442218 LRMPQ12912 555 aa15.64■□□□□ 0.09
SLC48A1-201ENST00000442218 NRBP1Q9UHY1 535 aa15.64■□□□□ 0.09
SLC48A1-201ENST00000442218 COPS6Q7L5N1 327 aa15.64■□□□□ 0.09
SLC48A1-201ENST00000442218 ZNF496Q96IT1 587 aaPredicted RBP15.64■□□□□ 0.09
SLC48A1-201ENST00000442218 DACT1Q9NYF0 836 aa15.64■□□□□ 0.09
SLC48A1-201ENST00000442218 GOLGA6L4A6NEF3 574 aa15.63■□□□□ 0.09
SLC48A1-201ENST00000442218 KDM4AO75164 1064 aa15.63■□□□□ 0.09
SLC48A1-201ENST00000442218 IGKV5-2P06315 115 aa15.63■□□□□ 0.09
SLC48A1-201ENST00000442218 HSP90B1P14625 803 aaKnown RBP15.63■□□□□ 0.09
SLC48A1-201ENST00000442218 GUCY1B3Q02153 619 aa15.63■□□□□ 0.09
SLC48A1-201ENST00000442218 CHST3Q7LGC8 479 aa15.63■□□□□ 0.09
SLC48A1-201ENST00000442218 XAGE3Q8WTP9 111 aa15.63■□□□□ 0.09
SLC48A1-201ENST00000442218 MYD88Q99836 296 aa15.63■□□□□ 0.09
SLC48A1-201ENST00000442218 ZNF330Q9Y3S2 320 aaPredicted RBP15.63■□□□□ 0.09
SLC48A1-201ENST00000442218 LRRC37A3O60309 1634 aa15.63■□□□□ 0.09
SLC48A1-201ENST00000442218 SLC27A2O14975 620 aa15.63■□□□□ 0.09
SLC48A1-201ENST00000442218 PTGS1P23219 599 aa15.63■□□□□ 0.09
SLC48A1-201ENST00000442218 CSPP1Q1MSJ5 1256 aa15.63■□□□□ 0.09
SLC48A1-201ENST00000442218 RUFY2Q8WXA3 655 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms