RNA–Protein interactions for RNA: ENST00000441883.5

MRPL28-204, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 5

Gene MRPL28, Length 800 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-204ENST00000441883 APLP1P51693 650 aa35.28■■■■□ 3.24
MRPL28-204ENST00000441883 PPP1R42Q7Z4L9 355 aa35.28■■■■□ 3.24
MRPL28-204ENST00000441883 HOXB7P09629 217 aa35.27■■■■□ 3.24
MRPL28-204ENST00000441883 C3orf67Q6ZVT6 689 aa35.27■■■■□ 3.24
MRPL28-204ENST00000441883 MBIPQ9NS73 344 aa35.27■■■■□ 3.24
MRPL28-204ENST00000441883 CHPF2Q9P2E5 772 aa35.27■■■■□ 3.24
MRPL28-204ENST00000441883 WDR90Q96KV7 1748 aa35.26■■■■□ 3.24
MRPL28-204ENST00000441883 FKBP4Q02790 459 aaKnown RBP eCLIP35.26■■■■□ 3.24
MRPL28-204ENST00000441883 SLC10A5Q5PT55 438 aa35.25■■■■□ 3.23
MRPL28-204ENST00000441883 RTKN2Q8IZC4 609 aa35.25■■■■□ 3.23
MRPL28-204ENST00000441883 SNED1Q8TER0 1413 aa35.24■■■■□ 3.23
MRPL28-204ENST00000441883 ANKRD36CQ5JPF3 1778 aa35.24■■■■□ 3.23
MRPL28-204ENST00000441883 HDGFL1Q5TGJ6 251 aa35.24■■■■□ 3.23
MRPL28-204ENST00000441883 UTP14AQ9BVJ6 771 aaKnown RBP35.24■■■■□ 3.23
MRPL28-204ENST00000441883 DUSP27Q5VZP5 1158 aa35.23■■■■□ 3.23
MRPL28-204ENST00000441883 RPGRQ92834 1020 aaKnown RBP35.23■■■■□ 3.23
MRPL28-204ENST00000441883 ZNF277Q9NRM2 450 aaPredicted RBP35.23■■■■□ 3.23
MRPL28-204ENST00000441883 TCIRG1Q13488 830 aa35.22■■■■□ 3.23
MRPL28-204ENST00000441883 HSP90AB3PQ58FF7 597 aa35.22■■■■□ 3.23
MRPL28-204ENST00000441883 NLRP10Q86W26 655 aa35.22■■■■□ 3.23
MRPL28-204ENST00000441883 CRAMP1Q96RY5 1269 aa35.22■■■■□ 3.23
MRPL28-204ENST00000441883 DDNO94850 711 aaPredicted RBP35.21■■■■□ 3.23
MRPL28-204ENST00000441883 DNAJC5GQ8N7S2 189 aa35.21■■■■□ 3.23
MRPL28-204ENST00000441883 SMC1BQ8NDV3 1235 aa35.21■■■■□ 3.23
MRPL28-204ENST00000441883 SYNE4Q8N205 404 aa35.2■■■■□ 3.23
MRPL28-204ENST00000441883 IFT57Q9NWB7 429 aa35.2■■■■□ 3.23
MRPL28-204ENST00000441883 DBF4Q9UBU7 674 aaPredicted RBP35.2■■■■□ 3.23
MRPL28-204ENST00000441883 RBM17Q96I25 401 aaKnown RBP35.19■■■■□ 3.22
MRPL28-204ENST00000441883 NLRP3Q96P20 1036 aa35.19■■■■□ 3.22
MRPL28-204ENST00000441883 RNF123Q5XPI4 1314 aa35.17■■■■□ 3.22
MRPL28-204ENST00000441883 GNAI1P63096 354 aa35.17■■■■□ 3.22
MRPL28-204ENST00000441883 CC2D2BQ6DHV5 1058 aa35.17■■■■□ 3.22
MRPL28-204ENST00000441883 SLC51AQ86UW1 340 aa35.17■■■■□ 3.22
MRPL28-204ENST00000441883 PLBD2Q8NHP8 589 aa35.16■■■■□ 3.22
MRPL28-204ENST00000441883 PSMD1Q99460 953 aa35.16■■■■□ 3.22
MRPL28-204ENST00000441883 IARSP41252 1262 aaKnown RBP35.15■■■■□ 3.22
MRPL28-204ENST00000441883 CALD1Q05682 793 aaKnown RBP35.15■■■■□ 3.22
MRPL28-204ENST00000441883 ANKRD13DQ6ZTN6 518 aa35.15■■■■□ 3.22
MRPL28-204ENST00000441883 HTRA3P83110 453 aa35.14■■■■□ 3.22
MRPL28-204ENST00000441883 HYPKQ9NX55 129 aa35.14■■■■□ 3.22
MRPL28-204ENST00000441883 ZNF316A6NFI3 1004 aaPredicted RBP35.13■■■■□ 3.21
MRPL28-204ENST00000441883 HCLS1P14317 486 aaPredicted RBP35.13■■■■□ 3.21
MRPL28-204ENST00000441883 TRMT112Q9UI30 125 aaKnown RBP35.13■■■■□ 3.21
MRPL28-204ENST00000441883 LAMB2P55268 1798 aa35.13■■■■□ 3.21
MRPL28-204ENST00000441883 PPEF1O14829 653 aaPredicted RBP35.12■■■■□ 3.21
MRPL28-204ENST00000441883 ZNF541Q9H0D2 1346 aa35.11■■■■□ 3.21
MRPL28-204ENST00000441883 ELL2O00472 640 aaPredicted RBP35.11■■■■□ 3.21
MRPL28-204ENST00000441883 TCERG1O14776 1098 aaKnown RBP35.11■■■■□ 3.21
MRPL28-204ENST00000441883 ISCA1Q9BUE6 129 aa35.11■■■■□ 3.21
MRPL28-204ENST00000441883 FZD9O00144 591 aa35.1■■■■□ 3.21
MRPL28-204ENST00000441883 C8orf58Q8NAV2 365 aa35.1■■■■□ 3.21
MRPL28-204ENST00000441883 L3MBTL3Q96JM7 780 aaPredicted RBP35.1■■■■□ 3.21
MRPL28-204ENST00000441883 SH3TC1Q8TE82 1336 aa35.09■■■■□ 3.21
MRPL28-204ENST00000441883 GRIPAP1Q4V328 841 aa35.09■■■■□ 3.21
MRPL28-204ENST00000441883 ZNF428Q96B54 188 aa35.09■■■■□ 3.21
MRPL28-204ENST00000441883 ABCC4O15439 1325 aa35.07■■■■□ 3.21
MRPL28-204ENST00000441883 ATP6V0A2Q9Y487 856 aa35.07■■■■□ 3.2
MRPL28-204ENST00000441883 COL4A5P29400 1685 aa35.07■■■■□ 3.2
MRPL28-204ENST00000441883 ATP5J2-PTCD1G3V325 749 aa35.06■■■■□ 3.2
MRPL28-204ENST00000441883 POTEIP0CG38 1075 aa35.06■■■■□ 3.2
MRPL28-204ENST00000441883 POTEJP0CG39 1038 aa35.06■■■■□ 3.2
MRPL28-204ENST00000441883 PHAXQ9H814 394 aaKnown RBP35.06■■■■□ 3.2
MRPL28-204ENST00000441883 SCN4AP35499 1836 aa35.06■■■■□ 3.2
MRPL28-204ENST00000441883 TRIM28Q13263 835 aaKnown RBP35.04■■■■□ 3.2
MRPL28-204ENST00000441883 CCDC27Q2M243 656 aa35.04■■■■□ 3.2
MRPL28-204ENST00000441883 BBOX1O75936 387 aa35.03■■■■□ 3.2
MRPL28-204ENST00000441883 TAF1DQ9H5J8 278 aaPredicted RBP35.03■■■■□ 3.2
MRPL28-204ENST00000441883 IQCA1LA6NCM1 817 aa35.02■■■■□ 3.2
MRPL28-204ENST00000441883 TAF1P21675 1872 aa35.02■■■■□ 3.2
MRPL28-204ENST00000441883 JDP2Q8WYK2 163 aa35.02■■■■□ 3.2
MRPL28-204ENST00000441883 DDX60Q8IY21 1712 aaKnown RBP35.01■■■■□ 3.2
MRPL28-204ENST00000441883 CHADLQ6NUI6 762 aa35.01■■■■□ 3.2
MRPL28-204ENST00000441883 WWC1Q8IX03 1113 aa35.01■■■■□ 3.2
MRPL28-204ENST00000441883 TSPYL6Q8N831 410 aa35.01■■■■□ 3.2
MRPL28-204ENST00000441883 KLRG1Q96E93 195 aa35.01■■■■□ 3.2
MRPL28-204ENST00000441883 FAM89AQ96GI7 184 aa35.01■■■■□ 3.2
MRPL28-204ENST00000441883 SP8Q8IXZ3 490 aa35■■■■□ 3.19
MRPL28-204ENST00000441883 MRS2Q9HD23 443 aa35■■■■□ 3.19
MRPL28-204ENST00000441883 DDX46Q7L014 1031 aaKnown RBP34.99■■■■□ 3.19
MRPL28-204ENST00000441883 RIC3Q7Z5B4 369 aa34.99■■■■□ 3.19
MRPL28-204ENST00000441883 LARGE2Q8N3Y3 721 aa34.99■■■■□ 3.19
MRPL28-204ENST00000441883 ANP32CO43423 234 aa34.98■■■■□ 3.19
MRPL28-204ENST00000441883 GPC2Q8N158 579 aa34.98■■■■□ 3.19
MRPL28-204ENST00000441883 TSR2Q969E8 191 aaKnown RBP34.98■■■■□ 3.19
MRPL28-204ENST00000441883 GRAPQ13588 217 aa34.97■■■■□ 3.19
MRPL28-204ENST00000441883 GRAPLQ8TC17 118 aaPredicted RBP34.97■■■■□ 3.19
MRPL28-204ENST00000441883 GOLGA2Q08379 1002 aa34.96■■■■□ 3.19
MRPL28-204ENST00000441883 SF3B3Q15393 1217 aaKnown RBP34.96■■■■□ 3.19
MRPL28-204ENST00000441883 RTFDC1Q9BY42 306 aaPredicted RBP34.96■■■■□ 3.19
MRPL28-204ENST00000441883 TMX4Q9H1E5 349 aaPredicted RBP34.96■■■■□ 3.19
MRPL28-204ENST00000441883 HACL1Q9UJ83 578 aa34.96■■■■□ 3.19
MRPL28-204ENST00000441883 NCBP3Q53F19 620 aaKnown RBP34.95■■■■□ 3.19
MRPL28-204ENST00000441883 CCDC30Q5VVM6 783 aa34.95■■■■□ 3.19
MRPL28-204ENST00000441883 EIF6P56537 245 aaKnown RBP34.94■■■■□ 3.18
MRPL28-204ENST00000441883 RTL5Q5HYW3 569 aaPredicted RBP34.94■■■■□ 3.18
MRPL28-204ENST00000441883 LDHDQ86WU2 507 aa34.94■■■■□ 3.18
MRPL28-204ENST00000441883 VPS33BQ9H267 617 aa34.94■■■■□ 3.18
MRPL28-204ENST00000441883 EPHX2P34913 555 aa34.93■■■■□ 3.18
MRPL28-204ENST00000441883 JMYQ8N9B5 988 aa34.93■■■■□ 3.18
MRPL28-204ENST00000441883 PPIP5K2O43314 1243 aa34.92■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms