RNA–Protein interactions for RNA: ENST00000440925.1

PLOD3-205, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 4

Gene PLOD3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-205ENST00000440925 NBPF7P0C2Y1 421 aaPredicted RBP18.87■□□□□ 0.61
PLOD3-205ENST00000440925 CCT4P50991 539 aaKnown RBP18.87■□□□□ 0.61
PLOD3-205ENST00000440925 HSP90AB3PQ58FF7 597 aa18.87■□□□□ 0.61
PLOD3-205ENST00000440925 UTYO14607 1347 aa18.86■□□□□ 0.61
PLOD3-205ENST00000440925 FAM177BA6PVY3 158 aa18.86■□□□□ 0.61
PLOD3-205ENST00000440925 MMP10P09238 476 aa18.86■□□□□ 0.61
PLOD3-205ENST00000440925 PTGER2P43116 358 aa18.86■□□□□ 0.61
PLOD3-205ENST00000440925 CCDC24Q8N4L8 307 aa18.86■□□□□ 0.61
PLOD3-205ENST00000440925 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.86■□□□□ 0.61
PLOD3-205ENST00000440925 FAM89AQ96GI7 184 aa18.86■□□□□ 0.61
PLOD3-205ENST00000440925 CRBNQ96SW2 442 aa18.86■□□□□ 0.61
PLOD3-205ENST00000440925 SETDB2Q96T68 719 aa18.86■□□□□ 0.61
PLOD3-205ENST00000440925 ZNF652Q9Y2D9 606 aa18.86■□□□□ 0.61
PLOD3-205ENST00000440925 IBTKQ9P2D0 1353 aaPredicted RBP18.85■□□□□ 0.61
PLOD3-205ENST00000440925 SERPINB2P05120 415 aa18.85■□□□□ 0.61
PLOD3-205ENST00000440925 MVPQ14764 893 aaKnown RBP18.85■□□□□ 0.61
PLOD3-205ENST00000440925 MEIS3Q99687 375 aa18.85■□□□□ 0.61
PLOD3-205ENST00000440925 CWC25Q9NXE8 425 aaPredicted RBP18.85■□□□□ 0.61
PLOD3-205ENST00000440925 PXDNLA1KZ92 1463 aa18.84■□□□□ 0.61
PLOD3-205ENST00000440925 COL24A1Q17RW2 1714 aa18.84■□□□□ 0.61
PLOD3-205ENST00000440925 NEXNQ0ZGT2 675 aa18.84■□□□□ 0.61
PLOD3-205ENST00000440925 ERFEQ4G0M1 354 aa18.84■□□□□ 0.61
PLOD3-205ENST00000440925 EPHA10Q5JZY3 1008 aa18.84■□□□□ 0.61
PLOD3-205ENST00000440925 C3orf67Q6ZVT6 689 aa18.84■□□□□ 0.61
PLOD3-205ENST00000440925 NUTM1Q86Y26 1132 aa18.84■□□□□ 0.61
PLOD3-205ENST00000440925 EXOC6Q8TAG9 804 aa18.84■□□□□ 0.61
PLOD3-205ENST00000440925 PCCAP05165 728 aaPredicted RBP18.83■□□□□ 0.6
PLOD3-205ENST00000440925 PARP10Q53GL7 1025 aa18.83■□□□□ 0.6
PLOD3-205ENST00000440925 RTL5Q5HYW3 569 aaPredicted RBP18.83■□□□□ 0.6
PLOD3-205ENST00000440925 SLC10A5Q5PT55 438 aa18.83■□□□□ 0.6
PLOD3-205ENST00000440925 PRR5LQ6MZQ0 368 aa18.83■□□□□ 0.6
PLOD3-205ENST00000440925 UTP14AQ9BVJ6 771 aaKnown RBP18.83■□□□□ 0.6
PLOD3-205ENST00000440925 MTFR1LQ9H019 292 aa18.83■□□□□ 0.6
PLOD3-205ENST00000440925 FTSJ3Q8IY81 847 aaKnown RBP18.82■□□□□ 0.6
PLOD3-205ENST00000440925 ZBTB38Q8NAP3 1195 aaPredicted RBP18.82■□□□□ 0.6
PLOD3-205ENST00000440925 ZBTB40Q9NUA8 1239 aa18.82■□□□□ 0.6
PLOD3-205ENST00000440925 TRMT112Q9UI30 125 aaKnown RBP18.82■□□□□ 0.6
PLOD3-205ENST00000440925 ANKRD36CQ5JPF3 1778 aa18.81■□□□□ 0.6
PLOD3-205ENST00000440925 GRM8O00222 908 aa18.81■□□□□ 0.6
PLOD3-205ENST00000440925 MS4A1P11836 297 aa18.81■□□□□ 0.6
PLOD3-205ENST00000440925 FOXO4P98177 505 aa18.81■□□□□ 0.6
PLOD3-205ENST00000440925 ITPRIPQ8IWB1 547 aa18.81■□□□□ 0.6
PLOD3-205ENST00000440925 SUCLG2Q96I99 432 aa18.81■□□□□ 0.6
PLOD3-205ENST00000440925 HCLS1P14317 486 aaPredicted RBP18.8■□□□□ 0.6
PLOD3-205ENST00000440925 UBE3BQ7Z3V4 1068 aa18.8■□□□□ 0.6
PLOD3-205ENST00000440925 PPP1R42Q7Z4L9 355 aa18.8■□□□□ 0.6
PLOD3-205ENST00000440925 TPTE2Q6XPS3 522 aa18.79■□□□□ 0.6
PLOD3-205ENST00000440925 NBPF5PQ86XG9 351 aaPredicted RBP18.79■□□□□ 0.6
PLOD3-205ENST00000440925 CARMIL3Q8ND23 1372 aa18.79■□□□□ 0.6
PLOD3-205ENST00000440925 ABCC12Q96J65 1359 aa18.79■□□□□ 0.6
PLOD3-205ENST00000440925 N4BP2Q86UW6 1770 aaPredicted RBP18.78■□□□□ 0.6
PLOD3-205ENST00000440925 NRXN2Q9P2S2 1712 aa18.78■□□□□ 0.6
PLOD3-205ENST00000440925 ANKRD44Q8N8A2 993 aa18.78■□□□□ 0.6
PLOD3-205ENST00000440925 C9orf78Q9NZ63 289 aaPredicted RBP18.78■□□□□ 0.6
PLOD3-205ENST00000440925 PARP3Q9Y6F1 533 aa18.78■□□□□ 0.6
PLOD3-205ENST00000440925 CDHR2Q9BYE9 1310 aa18.77■□□□□ 0.6
PLOD3-205ENST00000440925 AFDNP55196 1824 aaKnown RBP18.77■□□□□ 0.6
PLOD3-205ENST00000440925 KLRG2A4D1S0 409 aaPredicted RBP18.77■□□□□ 0.6
PLOD3-205ENST00000440925 IRS4O14654 1257 aaPredicted RBP18.77■□□□□ 0.6
PLOD3-205ENST00000440925 PLA2G12BQ9BX93 195 aa18.77■□□□□ 0.6
PLOD3-205ENST00000440925 C1orf115Q9H7X2 142 aa18.77■□□□□ 0.6
PLOD3-205ENST00000440925 SH3TC1Q8TE82 1336 aa18.76■□□□□ 0.59
PLOD3-205ENST00000440925 CSF1RP07333 972 aa18.76■□□□□ 0.59
PLOD3-205ENST00000440925 SIRT2Q8IXJ6 389 aa18.76■□□□□ 0.59
PLOD3-205ENST00000440925 DDX19BQ9UMR2 479 aa18.76■□□□□ 0.59
PLOD3-205ENST00000440925 PCDHB15Q9Y5E8 787 aa18.76■□□□□ 0.59
PLOD3-205ENST00000440925 LRRFIP2Q9Y608 721 aaKnown RBP18.76■□□□□ 0.59
PLOD3-205ENST00000440925 NYXQ9GZU5 481 aa18.75■□□□□ 0.59
PLOD3-205ENST00000440925 CNBD1Q8NA66 436 aa18.74■□□□□ 0.59
PLOD3-205ENST00000440925 TTLL11Q8NHH1 800 aa18.74■□□□□ 0.59
PLOD3-205ENST00000440925 BICC1Q9H694 974 aaKnown RBP18.74■□□□□ 0.59
PLOD3-205ENST00000440925 GNAI3P08754 354 aa18.73■□□□□ 0.59
PLOD3-205ENST00000440925 RABL6Q3YEC7 729 aaPredicted RBP18.73■□□□□ 0.59
PLOD3-205ENST00000440925 BRIP1Q9BX63 1249 aa18.73■□□□□ 0.59
PLOD3-205ENST00000440925 SPON1Q9HCB6 807 aa18.73■□□□□ 0.59
PLOD3-205ENST00000440925 PDE8AO60658 829 aa18.72■□□□□ 0.59
PLOD3-205ENST00000440925 UBTFL1P0CB47 393 aaPredicted RBP18.72■□□□□ 0.59
PLOD3-205ENST00000440925 KCNA3P22001 575 aa18.72■□□□□ 0.59
PLOD3-205ENST00000440925 SF3B3Q15393 1217 aaKnown RBP18.72■□□□□ 0.59
PLOD3-205ENST00000440925 COL4A1P02462 1669 aa18.72■□□□□ 0.59
PLOD3-205ENST00000440925 DDX60Q8IY21 1712 aaKnown RBP18.71■□□□□ 0.59
PLOD3-205ENST00000440925 GNAI2P04899 355 aa18.71■□□□□ 0.59
PLOD3-205ENST00000440925 RFX5P48382 616 aaPredicted RBP18.71■□□□□ 0.59
PLOD3-205ENST00000440925 ATP8B2P98198 1209 aa18.71■□□□□ 0.59
PLOD3-205ENST00000440925 LMBR1LQ6UX01 489 aa18.71■□□□□ 0.59
PLOD3-205ENST00000440925 ANKRD31Q8N7Z5 1873 aa18.71■□□□□ 0.59
PLOD3-205ENST00000440925 PNMA6EA0A0J9YXQ4 647 aa18.7■□□□□ 0.58
PLOD3-205ENST00000440925 GTF2E1P29083 439 aaPredicted RBP18.7■□□□□ 0.58
PLOD3-205ENST00000440925 CRY2Q49AN0 593 aa18.7■□□□□ 0.58
PLOD3-205ENST00000440925 SLC51AQ86UW1 340 aa18.7■□□□□ 0.58
PLOD3-205ENST00000440925 CCDC85AQ96PX6 553 aaPredicted RBP18.7■□□□□ 0.58
PLOD3-205ENST00000440925 SEC31BQ9NQW1 1179 aa18.7■□□□□ 0.58
PLOD3-205ENST00000440925 TNRC6CQ9HCJ0 1690 aaKnown RBP18.69■□□□□ 0.58
PLOD3-205ENST00000440925 POLD1P28340 1107 aa18.69■□□□□ 0.58
PLOD3-205ENST00000440925 CTSWP56202 376 aa18.69■□□□□ 0.58
PLOD3-205ENST00000440925 MTX1Q13505 466 aa18.69■□□□□ 0.58
PLOD3-205ENST00000440925 CEP85Q6P2H3 762 aa18.69■□□□□ 0.58
PLOD3-205ENST00000440925 RIC1Q4ADV7 1423 aa18.68■□□□□ 0.58
PLOD3-205ENST00000440925 C10orf71Q711Q0 1435 aa18.68■□□□□ 0.58
PLOD3-205ENST00000440925 CHRNA5P30532 468 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms