RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 WDR63Q8IWG1 891 aa17.73■□□□□ 0.43
LTBR-202ENST00000440421 ARFGEF2Q9Y6D5 1785 aa17.73■□□□□ 0.43
LTBR-202ENST00000440421 FANCIQ9NVI1 1328 aa17.72■□□□□ 0.43
LTBR-202ENST00000440421 SBF1O95248 1867 aa17.72■□□□□ 0.43
LTBR-202ENST00000440421 NFKBIEO00221 500 aa17.72■□□□□ 0.43
LTBR-202ENST00000440421 PRELPP51888 382 aa17.72■□□□□ 0.43
LTBR-202ENST00000440421 TWISTNBQ3B726 338 aaPredicted RBP17.72■□□□□ 0.43
LTBR-202ENST00000440421 ATP5J2-PTCD1G3V325 749 aa17.71■□□□□ 0.43
LTBR-202ENST00000440421 LMNB1P20700 586 aa17.71■□□□□ 0.43
LTBR-202ENST00000440421 GOLGA2Q08379 1002 aa17.71■□□□□ 0.43
LTBR-202ENST00000440421 CRY2Q49AN0 593 aa17.71■□□□□ 0.43
LTBR-202ENST00000440421 C3orf67Q6ZVT6 689 aa17.71■□□□□ 0.43
LTBR-202ENST00000440421 RIC3Q7Z5B4 369 aa17.71■□□□□ 0.43
LTBR-202ENST00000440421 SYNE4Q8N205 404 aa17.71■□□□□ 0.43
LTBR-202ENST00000440421 RPGRQ92834 1020 aaKnown RBP17.71■□□□□ 0.43
LTBR-202ENST00000440421 TRMT112Q9UI30 125 aaKnown RBP17.71■□□□□ 0.43
LTBR-202ENST00000440421 RIC1Q4ADV7 1423 aa17.71■□□□□ 0.43
LTBR-202ENST00000440421 ALDH1B1P30837 517 aa17.7■□□□□ 0.42
LTBR-202ENST00000440421 CHMP4AQ9BY43 222 aa17.7■□□□□ 0.42
LTBR-202ENST00000440421 SPINK5Q9NQ38 1064 aaPredicted RBP17.7■□□□□ 0.42
LTBR-202ENST00000440421 OLFM4Q6UX06 510 aa17.69■□□□□ 0.42
LTBR-202ENST00000440421 NLRP3Q96P20 1036 aa17.69■□□□□ 0.42
LTBR-202ENST00000440421 ISCA1Q9BUE6 129 aa17.69■□□□□ 0.42
LTBR-202ENST00000440421 STK31Q9BXU1 1019 aa17.69■□□□□ 0.42
LTBR-202ENST00000440421 FER1L6Q2WGJ9 1857 aa17.69■□□□□ 0.42
LTBR-202ENST00000440421 CCDC88AQ3V6T2 1871 aa17.69■□□□□ 0.42
LTBR-202ENST00000440421 RNF123Q5XPI4 1314 aa17.69■□□□□ 0.42
LTBR-202ENST00000440421 HCLS1P14317 486 aaPredicted RBP17.68■□□□□ 0.42
LTBR-202ENST00000440421 EXOSC9Q06265 439 aaKnown RBP17.68■□□□□ 0.42
LTBR-202ENST00000440421 CCDC93Q567U6 631 aa17.68■□□□□ 0.42
LTBR-202ENST00000440421 SLC10A5Q5PT55 438 aa17.68■□□□□ 0.42
LTBR-202ENST00000440421 SOGA3Q5TF21 947 aa17.68■□□□□ 0.42
LTBR-202ENST00000440421 C7orf43Q8WVR3 580 aa17.68■□□□□ 0.42
LTBR-202ENST00000440421 TAOK3Q9H2K8 898 aa17.68■□□□□ 0.42
LTBR-202ENST00000440421 SH3TC1Q8TE82 1336 aa17.68■□□□□ 0.42
LTBR-202ENST00000440421 RBM17Q96I25 401 aaKnown RBP17.67■□□□□ 0.42
LTBR-202ENST00000440421 MYD88Q99836 296 aa17.67■□□□□ 0.42
LTBR-202ENST00000440421 DDX58O95786 925 aaKnown RBP17.66■□□□□ 0.42
LTBR-202ENST00000440421 HOXA10P31260 410 aaPredicted RBP17.66■□□□□ 0.42
LTBR-202ENST00000440421 C1QTNF8P60827 252 aa17.66■□□□□ 0.42
LTBR-202ENST00000440421 RTL5Q5HYW3 569 aaPredicted RBP17.66■□□□□ 0.42
LTBR-202ENST00000440421 FAM89AQ96GI7 184 aa17.66■□□□□ 0.42
LTBR-202ENST00000440421 MYH16Q9H6N6 1097 aa17.66■□□□□ 0.42
LTBR-202ENST00000440421 TIAM2Q8IVF5 1701 aa17.66■□□□□ 0.42
LTBR-202ENST00000440421 CCER2I3L3R5 266 aa17.65■□□□□ 0.42
LTBR-202ENST00000440421 SLC4A2P04920 1241 aa17.65■□□□□ 0.42
LTBR-202ENST00000440421 G2E3Q7L622 706 aa17.65■□□□□ 0.42
LTBR-202ENST00000440421 CRAMP1Q96RY5 1269 aa17.65■□□□□ 0.42
LTBR-202ENST00000440421 NMRK2Q9NPI5 230 aa17.65■□□□□ 0.42
LTBR-202ENST00000440421 MAP3K2Q9Y2U5 619 aa17.65■□□□□ 0.42
LTBR-202ENST00000440421 LAMB2P55268 1798 aa17.65■□□□□ 0.42
LTBR-202ENST00000440421 LTBP3Q9NS15 1303 aa17.65■□□□□ 0.42
LTBR-202ENST00000440421 VAMP4O75379 141 aa17.64■□□□□ 0.41
LTBR-202ENST00000440421 PI4KAP2A4QPH2 592 aa17.63■□□□□ 0.41
LTBR-202ENST00000440421 KIF3CO14782 793 aa17.63■□□□□ 0.41
LTBR-202ENST00000440421 PPEF1O14829 653 aaPredicted RBP17.63■□□□□ 0.41
LTBR-202ENST00000440421 FKBP4Q02790 459 aaKnown RBP eCLIP17.63■□□□□ 0.41
LTBR-202ENST00000440421 TRIM28Q13263 835 aaKnown RBP17.63■□□□□ 0.41
LTBR-202ENST00000440421 KSR2Q6VAB6 950 aa17.63■□□□□ 0.41
LTBR-202ENST00000440421 SLC51AQ86UW1 340 aa17.63■□□□□ 0.41
LTBR-202ENST00000440421 RTKN2Q8IZC4 609 aa17.63■□□□□ 0.41
LTBR-202ENST00000440421 PI4KAP1Q8N8J0 262 aa17.63■□□□□ 0.41
LTBR-202ENST00000440421 METTL22Q9BUU2 404 aaPredicted RBP17.63■□□□□ 0.41
LTBR-202ENST00000440421 KDM2BQ8NHM5 1336 aa17.63■□□□□ 0.41
LTBR-202ENST00000440421 ZNF521Q96K83 1311 aa17.63■□□□□ 0.41
LTBR-202ENST00000440421 DDX60Q8IY21 1712 aaKnown RBP17.62■□□□□ 0.41
LTBR-202ENST00000440421 ZNF277Q9NRM2 450 aaPredicted RBP17.62■□□□□ 0.41
LTBR-202ENST00000440421 ABCC4O15439 1325 aa17.62■□□□□ 0.41
LTBR-202ENST00000440421 ZC3H4Q9UPT8 1303 aaKnown RBP17.62■□□□□ 0.41
LTBR-202ENST00000440421 IRS4O14654 1257 aaPredicted RBP17.61■□□□□ 0.41
LTBR-202ENST00000440421 DIEXFQ68CQ4 756 aaKnown RBP17.61■□□□□ 0.41
LTBR-202ENST00000440421 JARID2Q92833 1246 aaPredicted RBP17.61■□□□□ 0.41
LTBR-202ENST00000440421 DICER1Q9UPY3 1922 aaKnown RBP17.6■□□□□ 0.41
LTBR-202ENST00000440421 FLIIQ13045 1269 aa17.6■□□□□ 0.41
LTBR-202ENST00000440421 DDX46Q7L014 1031 aaKnown RBP17.6■□□□□ 0.41
LTBR-202ENST00000440421 ZBTB38Q8NAP3 1195 aaPredicted RBP17.6■□□□□ 0.41
LTBR-202ENST00000440421 CCDC191Q8NCU4 936 aa17.6■□□□□ 0.41
LTBR-202ENST00000440421 RRAGCQ9HB90 399 aa17.6■□□□□ 0.41
LTBR-202ENST00000440421 CWC25Q9NXE8 425 aaPredicted RBP17.6■□□□□ 0.41
LTBR-202ENST00000440421 GLTPD2A6NH11 291 aa17.59■□□□□ 0.41
LTBR-202ENST00000440421 FKBP5Q13451 457 aaPredicted RBP17.59■□□□□ 0.41
LTBR-202ENST00000440421 CC2D2BQ6DHV5 1058 aa17.59■□□□□ 0.41
LTBR-202ENST00000440421 SNED1Q8TER0 1413 aa17.58■□□□□ 0.41
LTBR-202ENST00000440421 IGKV5-2P06315 115 aa17.58■□□□□ 0.4
LTBR-202ENST00000440421 NEXNQ0ZGT2 675 aa17.58■□□□□ 0.4
LTBR-202ENST00000440421 CWF19L2Q2TBE0 894 aaKnown RBP17.58■□□□□ 0.4
LTBR-202ENST00000440421 TMX4Q9H1E5 349 aaPredicted RBP17.58■□□□□ 0.4
LTBR-202ENST00000440421 TAF1P21675 1872 aa17.58■□□□□ 0.4
LTBR-202ENST00000440421 BBOX1O75936 387 aa17.57■□□□□ 0.4
LTBR-202ENST00000440421 PCCAP05165 728 aaPredicted RBP17.57■□□□□ 0.4
LTBR-202ENST00000440421 IARSP41252 1262 aaKnown RBP17.57■□□□□ 0.4
LTBR-202ENST00000440421 GRAPQ13588 217 aa17.57■□□□□ 0.4
LTBR-202ENST00000440421 SF3B3Q15393 1217 aaKnown RBP17.57■□□□□ 0.4
LTBR-202ENST00000440421 DPY19L2Q6NUT2 758 aa17.57■□□□□ 0.4
LTBR-202ENST00000440421 MIER1Q8N108 512 aa17.57■□□□□ 0.4
LTBR-202ENST00000440421 GRAPLQ8TC17 118 aaPredicted RBP17.57■□□□□ 0.4
LTBR-202ENST00000440421 PSMD1Q99460 953 aa17.57■□□□□ 0.4
LTBR-202ENST00000440421 ATP6V0A2Q9Y487 856 aa17.57■□□□□ 0.4
LTBR-202ENST00000440421 C16orf71Q8IYS4 520 aaPredicted RBP17.56■□□□□ 0.4
LTBR-202ENST00000440421 CACNA1FO60840 1977 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms