RNA–Protein interactions for RNA: ENST00000440271.5

TRIM39-210, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-210ENST00000440271 ABCC12Q96J65 1359 aa27.43■■□□□ 1.98
TRIM39-210ENST00000440271 MAP2K1Q02750 393 aaPredicted RBP27.42■■□□□ 1.98
TRIM39-210ENST00000440271 DDX21Q9NR30 783 aaKnown RBP eCLIP27.42■■□□□ 1.98
TRIM39-210ENST00000440271 HSPA8P11142 646 aaKnown RBP27.41■■□□□ 1.98
TRIM39-210ENST00000440271 LMOD1P29536 600 aaPredicted RBP27.4■■□□□ 1.98
TRIM39-210ENST00000440271 HOXA10P31260 410 aaPredicted RBP27.4■■□□□ 1.98
TRIM39-210ENST00000440271 RPGRQ92834 1020 aaKnown RBP27.4■■□□□ 1.98
TRIM39-210ENST00000440271 MAP3K15Q6ZN16 1313 aa27.4■■□□□ 1.98
TRIM39-210ENST00000440271 GRIPAP1Q4V328 841 aa27.39■■□□□ 1.98
TRIM39-210ENST00000440271 COL4A5P29400 1685 aa27.39■■□□□ 1.97
TRIM39-210ENST00000440271 EPS15P42566 896 aa27.38■■□□□ 1.97
TRIM39-210ENST00000440271 SCNN1DP51172 638 aa27.38■■□□□ 1.97
TRIM39-210ENST00000440271 TTLL7Q6ZT98 887 aa27.38■■□□□ 1.97
TRIM39-210ENST00000440271 LARGE2Q8N3Y3 721 aa27.38■■□□□ 1.97
TRIM39-210ENST00000440271 RRP7AQ9Y3A4 280 aaKnown RBP27.38■■□□□ 1.97
TRIM39-210ENST00000440271 KIF6Q6ZMV9 814 aa27.37■■□□□ 1.97
TRIM39-210ENST00000440271 PNISRQ8TF01 805 aaKnown RBP27.37■■□□□ 1.97
TRIM39-210ENST00000440271 GPTP24298 496 aa27.36■■□□□ 1.97
TRIM39-210ENST00000440271 FMR1Q06787 632 aaKnown RBP eCLIP27.36■■□□□ 1.97
TRIM39-210ENST00000440271 SUSD4Q5VX71 490 aa27.36■■□□□ 1.97
TRIM39-210ENST00000440271 ABHD8Q96I13 439 aa27.36■■□□□ 1.97
TRIM39-210ENST00000440271 CRAMP1Q96RY5 1269 aa27.36■■□□□ 1.97
TRIM39-210ENST00000440271 UBN2Q6ZU65 1347 aa27.36■■□□□ 1.97
TRIM39-210ENST00000440271 RBM17Q96I25 401 aaKnown RBP27.35■■□□□ 1.97
TRIM39-210ENST00000440271 LTBP1Q14766 1721 aa27.35■■□□□ 1.97
TRIM39-210ENST00000440271 RIC1Q4ADV7 1423 aa27.34■■□□□ 1.97
TRIM39-210ENST00000440271 TCERG1O14776 1098 aaKnown RBP27.34■■□□□ 1.97
TRIM39-210ENST00000440271 MYL6BP14649 208 aa27.34■■□□□ 1.97
TRIM39-210ENST00000440271 EIF4A1P60842 406 aaKnown RBP27.34■■□□□ 1.97
TRIM39-210ENST00000440271 USP50Q70EL3 339 aaPredicted RBP27.34■■□□□ 1.97
TRIM39-210ENST00000440271 SLC51AQ86UW1 340 aa27.34■■□□□ 1.97
TRIM39-210ENST00000440271 ZBTB3Q9H5J0 574 aa27.34■■□□□ 1.97
TRIM39-210ENST00000440271 LAMB4A4D0S4 1761 aa27.34■■□□□ 1.97
TRIM39-210ENST00000440271 NUP98P52948 1817 aa27.34■■□□□ 1.97
TRIM39-210ENST00000440271 IBTKQ9P2D0 1353 aaPredicted RBP27.34■■□□□ 1.97
TRIM39-210ENST00000440271 PPEF1O14829 653 aaPredicted RBP27.33■■□□□ 1.97
TRIM39-210ENST00000440271 CAPNS2Q96L46 248 aa27.33■■□□□ 1.97
TRIM39-210ENST00000440271 CST9Q5W186 159 aa27.32■■□□□ 1.96
TRIM39-210ENST00000440271 PAXIP1Q6ZW49 1069 aaPredicted RBP27.32■■□□□ 1.96
TRIM39-210ENST00000440271 ZNF34Q8IZ26 560 aa27.32■■□□□ 1.96
TRIM39-210ENST00000440271 ECE1P42892 770 aa27.31■■□□□ 1.96
TRIM39-210ENST00000440271 NIM1KQ8IY84 436 aa27.31■■□□□ 1.96
TRIM39-210ENST00000440271 TRAF5O00463 557 aa27.3■■□□□ 1.96
TRIM39-210ENST00000440271 NTSR2O95665 410 aa27.3■■□□□ 1.96
TRIM39-210ENST00000440271 NEFMP07197 916 aa27.3■■□□□ 1.96
TRIM39-210ENST00000440271 CYP4F22Q6NT55 531 aa27.3■■□□□ 1.96
TRIM39-210ENST00000440271 C3orf67Q6ZVT6 689 aa27.3■■□□□ 1.96
TRIM39-210ENST00000440271 GPR101Q96P66 508 aaPredicted RBP27.3■■□□□ 1.96
TRIM39-210ENST00000440271 GRM1Q13255 1194 aa27.29■■□□□ 1.96
TRIM39-210ENST00000440271 GIGYF2Q6Y7W6 1299 aaKnown RBP27.29■■□□□ 1.96
TRIM39-210ENST00000440271 BEGAINQ9BUH8 593 aa27.29■■□□□ 1.96
TRIM39-210ENST00000440271 PPIP5K2O43314 1243 aa27.28■■□□□ 1.96
TRIM39-210ENST00000440271 TLL2Q9Y6L7 1015 aa27.28■■□□□ 1.96
TRIM39-210ENST00000440271 AOC3Q16853 763 aa27.27■■□□□ 1.96
TRIM39-210ENST00000440271 PPP1R42Q7Z4L9 355 aa27.27■■□□□ 1.96
TRIM39-210ENST00000440271 NLRP3Q96P20 1036 aa27.27■■□□□ 1.96
TRIM39-210ENST00000440271 THUMPD2Q9BTF0 503 aaKnown RBP27.27■■□□□ 1.96
TRIM39-210ENST00000440271 TMX4Q9H1E5 349 aaPredicted RBP27.27■■□□□ 1.96
TRIM39-210ENST00000440271 VPS33BQ9H267 617 aa27.27■■□□□ 1.96
TRIM39-210ENST00000440271 GPRC5DQ9NZD1 345 aa27.27■■□□□ 1.96
TRIM39-210ENST00000440271 KDM3BQ7LBC6 1761 aa27.27■■□□□ 1.96
TRIM39-210ENST00000440271 ADARB2Q9NS39 739 aaKnown RBP27.26■■□□□ 1.95
TRIM39-210ENST00000440271 ATP6V0A2Q9Y487 856 aa27.26■■□□□ 1.95
TRIM39-210ENST00000440271 PARP10Q53GL7 1025 aa27.25■■□□□ 1.95
TRIM39-210ENST00000440271 PLEKHF1Q96S99 279 aa27.25■■□□□ 1.95
TRIM39-210ENST00000440271 CXCL9Q07325 125 aa27.24■■□□□ 1.95
TRIM39-210ENST00000440271 SLC10A5Q5PT55 438 aa27.24■■□□□ 1.95
TRIM39-210ENST00000440271 ZNRF3Q9ULT6 936 aa27.24■■□□□ 1.95
TRIM39-210ENST00000440271 THSD7BQ9C0I4 1608 aa27.23■■□□□ 1.95
TRIM39-210ENST00000440271 ERBB4Q15303 1308 aa27.23■■□□□ 1.95
TRIM39-210ENST00000440271 MAP2K2P36507 400 aa27.23■■□□□ 1.95
TRIM39-210ENST00000440271 NFE2L2Q16236 605 aa27.23■■□□□ 1.95
TRIM39-210ENST00000440271 FAM161AQ3B820 660 aa27.23■■□□□ 1.95
TRIM39-210ENST00000440271 AOC2O75106 756 aa27.22■■□□□ 1.95
TRIM39-210ENST00000440271 UTP14AQ9BVJ6 771 aaKnown RBP27.22■■□□□ 1.95
TRIM39-210ENST00000440271 DLG5Q8TDM6 1919 aa27.22■■□□□ 1.95
TRIM39-210ENST00000440271 TRPM7Q96QT4 1865 aa27.21■■□□□ 1.95
TRIM39-210ENST00000440271 SUPT20HQ8NEM7 779 aa27.21■■□□□ 1.95
TRIM39-210ENST00000440271 RTFDC1Q9BY42 306 aaPredicted RBP27.21■■□□□ 1.95
TRIM39-210ENST00000440271 ABCC4O15439 1325 aa27.2■■□□□ 1.95
TRIM39-210ENST00000440271 CCDC85CA6NKD9 419 aa27.2■■□□□ 1.94
TRIM39-210ENST00000440271 GMPSP49915 693 aaPredicted RBP27.2■■□□□ 1.94
TRIM39-210ENST00000440271 LRP10Q7Z4F1 713 aa27.2■■□□□ 1.94
TRIM39-210ENST00000440271 SAPCD2Q86UD0 394 aa27.2■■□□□ 1.94
TRIM39-210ENST00000440271 TSKSQ9UJT2 592 aa27.2■■□□□ 1.94
TRIM39-210ENST00000440271 CELF2O95319 508 aaKnown RBP27.19■■□□□ 1.94
TRIM39-210ENST00000440271 PDIA6Q15084 440 aa27.19■■□□□ 1.94
TRIM39-210ENST00000440271 PGAP2Q9UHJ9 254 aa27.19■■□□□ 1.94
TRIM39-210ENST00000440271 BBOX1O75936 387 aa27.18■■□□□ 1.94
TRIM39-210ENST00000440271 SP8Q8IXZ3 490 aa27.18■■□□□ 1.94
TRIM39-210ENST00000440271 GLIS2Q9BZE0 524 aaPredicted RBP27.18■■□□□ 1.94
TRIM39-210ENST00000440271 EIF2S2P20042 333 aaKnown RBP27.17■■□□□ 1.94
TRIM39-210ENST00000440271 CIAPIN1Q6FI81 312 aa27.17■■□□□ 1.94
TRIM39-210ENST00000440271 DPP8Q6V1X1 898 aaPredicted RBP27.17■■□□□ 1.94
TRIM39-210ENST00000440271 MPNDQ8N594 471 aa27.16■■□□□ 1.94
TRIM39-210ENST00000440271 HHIPL1Q96JK4 782 aa27.16■■□□□ 1.94
TRIM39-210ENST00000440271 TSPYL4Q9UJ04 414 aa27.16■■□□□ 1.94
TRIM39-210ENST00000440271 KIAA2012Q0VF49 1180 aa27.15■■□□□ 1.94
TRIM39-210ENST00000440271 BCL2L13Q9BXK5 485 aa27.15■■□□□ 1.94
TRIM39-210ENST00000440271 PNNQ9H307 717 aaKnown RBP27.15■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms