RNA–Protein interactions for RNA: ENST00000439780.5

UBE2F-213, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 5

Gene UBE2F, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-213ENST00000439780 PIM2Q9P1W9 311 aa13.42□□□□□ -0.26
UBE2F-213ENST00000439780 IBTKQ9P2D0 1353 aaPredicted RBP13.42□□□□□ -0.26
UBE2F-213ENST00000439780 BRCA1P38398 1863 aaKnown RBP13.42□□□□□ -0.26
UBE2F-213ENST00000439780 COL11A2P13942 1736 aaPredicted RBP13.42□□□□□ -0.26
UBE2F-213ENST00000439780 H0YIN7 160 aa13.41□□□□□ -0.26
UBE2F-213ENST00000439780 DDX58O95786 925 aaKnown RBP13.41□□□□□ -0.26
UBE2F-213ENST00000439780 IGKV5-2P06315 115 aa13.41□□□□□ -0.26
UBE2F-213ENST00000439780 SRGNP10124 158 aa13.41□□□□□ -0.26
UBE2F-213ENST00000439780 GTF2E1P29083 439 aaPredicted RBP13.41□□□□□ -0.26
UBE2F-213ENST00000439780 SSH1Q8WYL5 1049 aa13.41□□□□□ -0.26
UBE2F-213ENST00000439780 BCS1LQ9Y276 419 aa13.41□□□□□ -0.26
UBE2F-213ENST00000439780 TNRC6CQ9HCJ0 1690 aaKnown RBP13.4□□□□□ -0.26
UBE2F-213ENST00000439780 ZBED9Q6R2W3 1325 aa13.4□□□□□ -0.26
UBE2F-213ENST00000439780 DCAF8L1A6NGE4 600 aa13.4□□□□□ -0.26
UBE2F-213ENST00000439780 FKBP5Q13451 457 aaPredicted RBP13.4□□□□□ -0.26
UBE2F-213ENST00000439780 SLC10A5Q5PT55 438 aa13.4□□□□□ -0.26
UBE2F-213ENST00000439780 BCL2L13Q9BXK5 485 aa13.4□□□□□ -0.26
UBE2F-213ENST00000439780 TRMT112Q9UI30 125 aaKnown RBP13.4□□□□□ -0.26
UBE2F-213ENST00000439780 UTRNP46939 3433 aa13.4□□□□□ -0.26
UBE2F-213ENST00000439780 F6X3S4 739 aa13.39□□□□□ -0.27
UBE2F-213ENST00000439780 HCLS1P14317 486 aaPredicted RBP13.39□□□□□ -0.27
UBE2F-213ENST00000439780 DALRD3Q5D0E6 543 aaKnown RBP13.39□□□□□ -0.27
UBE2F-213ENST00000439780 JARID2Q92833 1246 aaPredicted RBP13.39□□□□□ -0.27
UBE2F-213ENST00000439780 ZNF622Q969S3 477 aaKnown RBP eCLIP13.39□□□□□ -0.27
UBE2F-213ENST00000439780 FAM89AQ96GI7 184 aa13.39□□□□□ -0.27
UBE2F-213ENST00000439780 DLEC1Q9Y238 1755 aa13.39□□□□□ -0.27
UBE2F-213ENST00000439780 CACNA1FO60840 1977 aa13.39□□□□□ -0.27
UBE2F-213ENST00000439780 CWF19L2Q2TBE0 894 aaKnown RBP13.38□□□□□ -0.27
UBE2F-213ENST00000439780 CRY2Q49AN0 593 aa13.38□□□□□ -0.27
UBE2F-213ENST00000439780 RTL5Q5HYW3 569 aaPredicted RBP13.38□□□□□ -0.27
UBE2F-213ENST00000439780 STYK1Q6J9G0 422 aa13.38□□□□□ -0.27
UBE2F-213ENST00000439780 TTLL6Q8N841 843 aa13.38□□□□□ -0.27
UBE2F-213ENST00000439780 DNAAF4Q8WXU2 420 aa13.38□□□□□ -0.27
UBE2F-213ENST00000439780 PDZRN3Q9UPQ7 1066 aa13.38□□□□□ -0.27
UBE2F-213ENST00000439780 RIC1Q4ADV7 1423 aa13.38□□□□□ -0.27
UBE2F-213ENST00000439780 SH3TC1Q8TE82 1336 aa13.38□□□□□ -0.27
UBE2F-213ENST00000439780 NEURL1BA8MQ27 555 aa13.37□□□□□ -0.27
UBE2F-213ENST00000439780 GRIN3BO60391 1043 aa13.37□□□□□ -0.27
UBE2F-213ENST00000439780 CT47B1P0C2W7 299 aaPredicted RBP13.37□□□□□ -0.27
UBE2F-213ENST00000439780 NPR1P16066 1061 aa13.37□□□□□ -0.27
UBE2F-213ENST00000439780 ALDH1L2Q3SY69 923 aa13.37□□□□□ -0.27
UBE2F-213ENST00000439780 CCDC191Q8NCU4 936 aa13.37□□□□□ -0.27
UBE2F-213ENST00000439780 MASTLQ96GX5 879 aa13.37□□□□□ -0.27
UBE2F-213ENST00000439780 RNF123Q5XPI4 1314 aa13.37□□□□□ -0.27
UBE2F-213ENST00000439780 RARSP54136 660 aaKnown RBP13.36□□□□□ -0.27
UBE2F-213ENST00000439780 ZBTB38Q8NAP3 1195 aaPredicted RBP13.36□□□□□ -0.27
UBE2F-213ENST00000439780 CWC25Q9NXE8 425 aaPredicted RBP13.36□□□□□ -0.27
UBE2F-213ENST00000439780 SLX4Q8IY92 1834 aa13.35□□□□□ -0.27
UBE2F-213ENST00000439780 ARFGEF1Q9Y6D6 1849 aa13.35□□□□□ -0.27
UBE2F-213ENST00000439780 PCCAP05165 728 aaPredicted RBP13.35□□□□□ -0.27
UBE2F-213ENST00000439780 NEXNQ0ZGT2 675 aa13.35□□□□□ -0.27
UBE2F-213ENST00000439780 BEND3Q5T5X7 828 aa13.35□□□□□ -0.27
UBE2F-213ENST00000439780 PRPF40BQ6NWY9 871 aaKnown RBP13.35□□□□□ -0.27
UBE2F-213ENST00000439780 ARHGAP27Q6ZUM4 889 aa13.35□□□□□ -0.27
UBE2F-213ENST00000439780 SLC51AQ86UW1 340 aa13.35□□□□□ -0.27
UBE2F-213ENST00000439780 NLRP3Q96P20 1036 aa13.35□□□□□ -0.27
UBE2F-213ENST00000439780 SMC4Q9NTJ3 1288 aa13.35□□□□□ -0.27
UBE2F-213ENST00000439780 ZNF219Q9P2Y4 722 aaPredicted RBP13.35□□□□□ -0.27
UBE2F-213ENST00000439780 DDX60Q8IY21 1712 aaKnown RBP13.34□□□□□ -0.27
UBE2F-213ENST00000439780 IRS4O14654 1257 aaPredicted RBP13.34□□□□□ -0.27
UBE2F-213ENST00000439780 C21orf2O43822 256 aa13.34□□□□□ -0.27
UBE2F-213ENST00000439780 HOXA10P31260 410 aaPredicted RBP13.34□□□□□ -0.27
UBE2F-213ENST00000439780 GCKRQ14397 625 aa13.34□□□□□ -0.27
UBE2F-213ENST00000439780 LINS1Q8NG48 757 aa13.34□□□□□ -0.27
UBE2F-213ENST00000439780 C7orf43Q8WVR3 580 aa13.34□□□□□ -0.27
UBE2F-213ENST00000439780 CNKSR1Q969H4 720 aa13.34□□□□□ -0.27
UBE2F-213ENST00000439780 LAMB2P55268 1798 aa13.34□□□□□ -0.27
UBE2F-213ENST00000439780 H7C1W4 665 aa13.33□□□□□ -0.28
UBE2F-213ENST00000439780 BRPF1P55201 1214 aaPredicted RBP13.33□□□□□ -0.28
UBE2F-213ENST00000439780 CASP7P55210 303 aa13.33□□□□□ -0.28
UBE2F-213ENST00000439780 OLFM4Q6UX06 510 aa13.33□□□□□ -0.28
UBE2F-213ENST00000439780 RPGRQ92834 1020 aaKnown RBP13.33□□□□□ -0.28
UBE2F-213ENST00000439780 NOB1Q9ULX3 412 aaKnown RBP13.33□□□□□ -0.28
UBE2F-213ENST00000439780 CACNA1SQ13698 1873 aa13.32□□□□□ -0.28
UBE2F-213ENST00000439780 BCAR3O75815 825 aa13.32□□□□□ -0.28
UBE2F-213ENST00000439780 PRELPP51888 382 aa13.32□□□□□ -0.28
UBE2F-213ENST00000439780 SF3B3Q15393 1217 aaKnown RBP13.32□□□□□ -0.28
UBE2F-213ENST00000439780 SLC4A10Q6U841 1118 aa13.32□□□□□ -0.28
UBE2F-213ENST00000439780 RBM17Q96I25 401 aaKnown RBP13.32□□□□□ -0.28
UBE2F-213ENST00000439780 CRAMP1Q96RY5 1269 aa13.32□□□□□ -0.28
UBE2F-213ENST00000439780 PTPRCP08575 1304 aa13.32□□□□□ -0.28
UBE2F-213ENST00000439780 COL4A1P02462 1669 aa13.31□□□□□ -0.28
UBE2F-213ENST00000439780 NFKBIEO00221 500 aa13.31□□□□□ -0.28
UBE2F-213ENST00000439780 ALDH1B1P30837 517 aa13.31□□□□□ -0.28
UBE2F-213ENST00000439780 RASSF7Q02833 373 aa13.31□□□□□ -0.28
UBE2F-213ENST00000439780 UBE3BQ7Z3V4 1068 aa13.31□□□□□ -0.28
UBE2F-213ENST00000439780 ABCC4O15439 1325 aa13.31□□□□□ -0.28
UBE2F-213ENST00000439780 CDHR2Q9BYE9 1310 aa13.31□□□□□ -0.28
UBE2F-213ENST00000439780 PDE8AO60658 829 aa13.3□□□□□ -0.28
UBE2F-213ENST00000439780 TAF1P21675 1872 aa13.29□□□□□ -0.28
UBE2F-213ENST00000439780 CHD4Q14839 1912 aa13.29□□□□□ -0.28
UBE2F-213ENST00000439780 ALDH1L1O75891 902 aa13.29□□□□□ -0.28
UBE2F-213ENST00000439780 YY1P25490 414 aa13.29□□□□□ -0.28
UBE2F-213ENST00000439780 CCDC85AQ96PX6 553 aaPredicted RBP13.29□□□□□ -0.28
UBE2F-213ENST00000439780 SRCIN1Q9C0H9 1055 aa13.29□□□□□ -0.28
UBE2F-213ENST00000439780 SEC31BQ9NQW1 1179 aa13.29□□□□□ -0.28
UBE2F-213ENST00000439780 TNNQ9UQP3 1299 aa13.29□□□□□ -0.28
UBE2F-213ENST00000439780 PPEF1O14829 653 aaPredicted RBP13.28□□□□□ -0.28
UBE2F-213ENST00000439780 DDX46Q7L014 1031 aaKnown RBP13.28□□□□□ -0.28
UBE2F-213ENST00000439780 TTLL11Q8NHH1 800 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms