RNA–Protein interactions for RNA: ENST00000439555.2

IRF1-204, Transcript of interferon regulatory factor 1, humanhuman

TSL 5

Gene IRF1, Length 524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-204ENST00000439555 CLEC11AQ9Y240 323 aa15.05■□□□□ -0
IRF1-204ENST00000439555 MAP3K15Q6ZN16 1313 aa15.04■□□□□ -0
IRF1-204ENST00000439555 FKBP4Q02790 459 aaKnown RBP eCLIP15.04■□□□□ -0
IRF1-204ENST00000439555 HLFQ16534 295 aa15.04■□□□□ -0
IRF1-204ENST00000439555 RTKN2Q8IZC4 609 aa15.04■□□□□ -0
IRF1-204ENST00000439555 CCDC24Q8N4L8 307 aa15.04■□□□□ -0
IRF1-204ENST00000439555 FZD9O00144 591 aa15.03■□□□□ -0
IRF1-204ENST00000439555 NPR1P16066 1061 aa15.03■□□□□ -0
IRF1-204ENST00000439555 ECE1P42892 770 aa15.03■□□□□ -0
IRF1-204ENST00000439555 EAPPQ56P03 285 aaPredicted RBP15.03■□□□□ -0
IRF1-204ENST00000439555 KIF6Q6ZMV9 814 aa15.03■□□□□ -0
IRF1-204ENST00000439555 NYXQ9GZU5 481 aa15.03■□□□□ -0
IRF1-204ENST00000439555 ADAMTS8Q9UP79 889 aa15.03■□□□□ -0
IRF1-204ENST00000439555 RRP7AQ9Y3A4 280 aaKnown RBP15.03■□□□□ -0
IRF1-204ENST00000439555 CHL1O00533 1208 aa15.02■□□□□ -0
IRF1-204ENST00000439555 GPC2Q8N158 579 aa15.02■□□□□ -0
IRF1-204ENST00000439555 BEGAINQ9BUH8 593 aa15.02■□□□□ -0
IRF1-204ENST00000439555 CCDC85CA6NKD9 419 aa15.01□□□□□ -0.01
IRF1-204ENST00000439555 ZEB1P37275 1124 aaPredicted RBP15.01□□□□□ -0.01
IRF1-204ENST00000439555 TTLL7Q6ZT98 887 aa15.01□□□□□ -0.01
IRF1-204ENST00000439555 LRP10Q7Z4F1 713 aa15.01□□□□□ -0.01
IRF1-204ENST00000439555 DDX21Q9NR30 783 aaKnown RBP eCLIP15.01□□□□□ -0.01
IRF1-204ENST00000439555 TRIM35Q9UPQ4 493 aa15.01□□□□□ -0.01
IRF1-204ENST00000439555 CASP8AP2Q9UKL3 1982 aa15.01□□□□□ -0.01
IRF1-204ENST00000439555 TNRC18O15417 2968 aaPredicted RBP15.01□□□□□ -0.01
IRF1-204ENST00000439555 IBTKQ9P2D0 1353 aaPredicted RBP15□□□□□ -0.01
IRF1-204ENST00000439555 MYL6BP14649 208 aa15□□□□□ -0.01
IRF1-204ENST00000439555 GTF2E1P29083 439 aaPredicted RBP15□□□□□ -0.01
IRF1-204ENST00000439555 ALDH1B1P30837 517 aa15□□□□□ -0.01
IRF1-204ENST00000439555 MAP2K2P36507 400 aa15□□□□□ -0.01
IRF1-204ENST00000439555 PDIA6Q15084 440 aa15□□□□□ -0.01
IRF1-204ENST00000439555 MAP1SQ66K74 1059 aaPredicted RBP15□□□□□ -0.01
IRF1-204ENST00000439555 GIGYF2Q6Y7W6 1299 aaKnown RBP15□□□□□ -0.01
IRF1-204ENST00000439555 CCDC146Q8IYE0 955 aa15□□□□□ -0.01
IRF1-204ENST00000439555 NGEFQ8N5V2 710 aa15□□□□□ -0.01
IRF1-204ENST00000439555 ABT1Q9ULW3 272 aaKnown RBP15□□□□□ -0.01
IRF1-204ENST00000439555 ZNF541Q9H0D2 1346 aa14.99□□□□□ -0.01
IRF1-204ENST00000439555 KDM3BQ7LBC6 1761 aa14.99□□□□□ -0.01
IRF1-204ENST00000439555 IARSP41252 1262 aaKnown RBP14.99□□□□□ -0.01
IRF1-204ENST00000439555 CRY2Q49AN0 593 aa14.99□□□□□ -0.01
IRF1-204ENST00000439555 ZNF34Q8IZ26 560 aa14.99□□□□□ -0.01
IRF1-204ENST00000439555 CA12O43570 354 aa14.98□□□□□ -0.01
IRF1-204ENST00000439555 HOXB7P09629 217 aa14.98□□□□□ -0.01
IRF1-204ENST00000439555 EIF2S2P20042 333 aaKnown RBP14.98□□□□□ -0.01
IRF1-204ENST00000439555 NEUROD2Q15784 382 aa14.98□□□□□ -0.01
IRF1-204ENST00000439555 PARP10Q53GL7 1025 aa14.98□□□□□ -0.01
IRF1-204ENST00000439555 CAPNS2Q96L46 248 aa14.98□□□□□ -0.01
IRF1-204ENST00000439555 GPR101Q96P66 508 aaPredicted RBP14.98□□□□□ -0.01
IRF1-204ENST00000439555 PSMD1Q99460 953 aa14.98□□□□□ -0.01
IRF1-204ENST00000439555 ZNF277Q9NRM2 450 aaPredicted RBP14.98□□□□□ -0.01
IRF1-204ENST00000439555 RNF123Q5XPI4 1314 aa14.97□□□□□ -0.01
IRF1-204ENST00000439555 GRIPAP1Q4V328 841 aa14.97□□□□□ -0.01
IRF1-204ENST00000439555 CC2D2BQ6DHV5 1058 aa14.97□□□□□ -0.01
IRF1-204ENST00000439555 SYNE4Q8N205 404 aa14.97□□□□□ -0.01
IRF1-204ENST00000439555 JDP2Q8WYK2 163 aa14.97□□□□□ -0.01
IRF1-204ENST00000439555 CFAP44Q96MT7 982 aa14.97□□□□□ -0.01
IRF1-204ENST00000439555 ZBTB3Q9H5J0 574 aa14.97□□□□□ -0.01
IRF1-204ENST00000439555 RIC1Q4ADV7 1423 aa14.97□□□□□ -0.01
IRF1-204ENST00000439555 DLG5Q8TDM6 1919 aa14.96□□□□□ -0.01
IRF1-204ENST00000439555 FAM177BA6PVY3 158 aa14.96□□□□□ -0.01
IRF1-204ENST00000439555 HOXA10P31260 410 aaPredicted RBP14.96□□□□□ -0.01
IRF1-204ENST00000439555 PPP1R42Q7Z4L9 355 aa14.96□□□□□ -0.01
IRF1-204ENST00000439555 LAMB4A4D0S4 1761 aa14.96□□□□□ -0.02
IRF1-204ENST00000439555 UBN2Q6ZU65 1347 aa14.95□□□□□ -0.02
IRF1-204ENST00000439555 LTBP1Q14766 1721 aa14.95□□□□□ -0.02
IRF1-204ENST00000439555 CALD1Q05682 793 aaKnown RBP14.95□□□□□ -0.02
IRF1-204ENST00000439555 HSP90AB3PQ58FF7 597 aa14.95□□□□□ -0.02
IRF1-204ENST00000439555 SUSD4Q5VX71 490 aa14.95□□□□□ -0.02
IRF1-204ENST00000439555 USP50Q70EL3 339 aaPredicted RBP14.95□□□□□ -0.02
IRF1-204ENST00000439555 HHIPL1Q96JK4 782 aa14.95□□□□□ -0.02
IRF1-204ENST00000439555 TLL2Q9Y6L7 1015 aa14.95□□□□□ -0.02
IRF1-204ENST00000439555 SNED1Q8TER0 1413 aa14.94□□□□□ -0.02
IRF1-204ENST00000439555 NTSR2O95665 410 aa14.94□□□□□ -0.02
IRF1-204ENST00000439555 GPTP24298 496 aa14.94□□□□□ -0.02
IRF1-204ENST00000439555 LMOD1P29536 600 aaPredicted RBP14.94□□□□□ -0.02
IRF1-204ENST00000439555 EIF6P56537 245 aaKnown RBP14.94□□□□□ -0.02
IRF1-204ENST00000439555 PROSER3Q2NL68 480 aa14.94□□□□□ -0.02
IRF1-204ENST00000439555 SLC10A5Q5PT55 438 aa14.94□□□□□ -0.02
IRF1-204ENST00000439555 CST9Q5W186 159 aa14.94□□□□□ -0.02
IRF1-204ENST00000439555 COPS6Q7L5N1 327 aa14.94□□□□□ -0.02
IRF1-204ENST00000439555 NUTM1Q86Y26 1132 aa14.94□□□□□ -0.02
IRF1-204ENST00000439555 NUP98P52948 1817 aa14.94□□□□□ -0.02
IRF1-204ENST00000439555 PDE4DIPQ5VU43 2346 aa14.93□□□□□ -0.02
IRF1-204ENST00000439555 ZNF853P0CG23 659 aa14.93□□□□□ -0.02
IRF1-204ENST00000439555 CYP4F22Q6NT55 531 aa14.93□□□□□ -0.02
IRF1-204ENST00000439555 CRAMP1Q96RY5 1269 aa14.93□□□□□ -0.02
IRF1-204ENST00000439555 UTP14AQ9BVJ6 771 aaKnown RBP14.93□□□□□ -0.02
IRF1-204ENST00000439555 LAS1LQ9Y4W2 734 aaKnown RBP14.93□□□□□ -0.02
IRF1-204ENST00000439555 ABCC12Q96J65 1359 aa14.93□□□□□ -0.02
IRF1-204ENST00000439555 APAF1O14727 1248 aa14.92□□□□□ -0.02
IRF1-204ENST00000439555 XAGE3Q8WTP9 111 aa14.92□□□□□ -0.02
IRF1-204ENST00000439555 RPGRQ92834 1020 aaKnown RBP14.92□□□□□ -0.02
IRF1-204ENST00000439555 NLRP3Q96P20 1036 aa14.92□□□□□ -0.02
IRF1-204ENST00000439555 IFT57Q9NWB7 429 aa14.92□□□□□ -0.02
IRF1-204ENST00000439555 DBF4Q9UBU7 674 aaPredicted RBP14.92□□□□□ -0.02
IRF1-204ENST00000439555 ANXA1P04083 346 aa14.91□□□□□ -0.02
IRF1-204ENST00000439555 SCNN1DP51172 638 aa14.91□□□□□ -0.02
IRF1-204ENST00000439555 TCIRG1Q13488 830 aa14.91□□□□□ -0.02
IRF1-204ENST00000439555 KRT24Q2M2I5 525 aa14.91□□□□□ -0.02
IRF1-204ENST00000439555 HDGFL1Q5TGJ6 251 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms