RNA–Protein interactions for RNA: ENST00000439513.1

ATAD3A-206, Transcript of ATPase family, AAA domain containing 3A, humanhuman

TSL 5

Gene ATAD3A, Length 403 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATAD3A-206ENST00000439513 ZNF853P0CG23 659 aa18.79■□□□□ 0.6
ATAD3A-206ENST00000439513 ALDH1B1P30837 517 aa18.79■□□□□ 0.6
ATAD3A-206ENST00000439513 HOXA10P31260 410 aaPredicted RBP18.79■□□□□ 0.6
ATAD3A-206ENST00000439513 AIMP1Q12904 312 aaKnown RBP18.79■□□□□ 0.6
ATAD3A-206ENST00000439513 PARP10Q53GL7 1025 aa18.79■□□□□ 0.6
ATAD3A-206ENST00000439513 CFAP44Q96MT7 982 aa18.79■□□□□ 0.6
ATAD3A-206ENST00000439513 ZNF277Q9NRM2 450 aaPredicted RBP18.79■□□□□ 0.6
ATAD3A-206ENST00000439513 PPP1R42Q7Z4L9 355 aa18.78■□□□□ 0.6
ATAD3A-206ENST00000439513 MBIPQ9NS73 344 aa18.78■□□□□ 0.6
ATAD3A-206ENST00000439513 DDNO94850 711 aaPredicted RBP18.77■□□□□ 0.6
ATAD3A-206ENST00000439513 HOXB7P09629 217 aa18.77■□□□□ 0.6
ATAD3A-206ENST00000439513 HTRA3P83110 453 aa18.77■□□□□ 0.6
ATAD3A-206ENST00000439513 HDGFL1Q5TGJ6 251 aa18.77■□□□□ 0.6
ATAD3A-206ENST00000439513 DPY19L2Q6NUT2 758 aa18.77■□□□□ 0.6
ATAD3A-206ENST00000439513 RTKN2Q8IZC4 609 aa18.77■□□□□ 0.6
ATAD3A-206ENST00000439513 DNAJC5GQ8N7S2 189 aa18.77■□□□□ 0.6
ATAD3A-206ENST00000439513 SLC10A5Q5PT55 438 aa18.76■□□□□ 0.59
ATAD3A-206ENST00000439513 NLRP10Q86W26 655 aa18.76■□□□□ 0.59
ATAD3A-206ENST00000439513 SYNE4Q8N205 404 aa18.76■□□□□ 0.59
ATAD3A-206ENST00000439513 SMC1BQ8NDV3 1235 aa18.76■□□□□ 0.59
ATAD3A-206ENST00000439513 UTP14AQ9BVJ6 771 aaKnown RBP18.76■□□□□ 0.59
ATAD3A-206ENST00000439513 DUSP27Q5VZP5 1158 aa18.75■□□□□ 0.59
ATAD3A-206ENST00000439513 RPGRQ92834 1020 aaKnown RBP18.75■□□□□ 0.59
ATAD3A-206ENST00000439513 CRAMP1Q96RY5 1269 aa18.75■□□□□ 0.59
ATAD3A-206ENST00000439513 COL4A5P29400 1685 aa18.75■□□□□ 0.59
ATAD3A-206ENST00000439513 LAMB2P55268 1798 aa18.75■□□□□ 0.59
ATAD3A-206ENST00000439513 ZNF541Q9H0D2 1346 aa18.74■□□□□ 0.59
ATAD3A-206ENST00000439513 TCIRG1Q13488 830 aa18.74■□□□□ 0.59
ATAD3A-206ENST00000439513 RBM17Q96I25 401 aaKnown RBP18.74■□□□□ 0.59
ATAD3A-206ENST00000439513 IFT57Q9NWB7 429 aa18.74■□□□□ 0.59
ATAD3A-206ENST00000439513 IARSP41252 1262 aaKnown RBP18.73■□□□□ 0.59
ATAD3A-206ENST00000439513 HSP90AB3PQ58FF7 597 aa18.73■□□□□ 0.59
ATAD3A-206ENST00000439513 ZNF428Q96B54 188 aa18.73■□□□□ 0.59
ATAD3A-206ENST00000439513 PSMD1Q99460 953 aa18.73■□□□□ 0.59
ATAD3A-206ENST00000439513 HCLS1P14317 486 aaPredicted RBP18.72■□□□□ 0.59
ATAD3A-206ENST00000439513 ZEB1P37275 1124 aaPredicted RBP18.72■□□□□ 0.59
ATAD3A-206ENST00000439513 PLBD2Q8NHP8 589 aa18.72■□□□□ 0.59
ATAD3A-206ENST00000439513 NLRP3Q96P20 1036 aa18.72■□□□□ 0.59
ATAD3A-206ENST00000439513 DBF4Q9UBU7 674 aaPredicted RBP18.72■□□□□ 0.59
ATAD3A-206ENST00000439513 RNF123Q5XPI4 1314 aa18.72■□□□□ 0.59
ATAD3A-206ENST00000439513 PCNTO95613 3336 aa18.71■□□□□ 0.59
ATAD3A-206ENST00000439513 PPEF1O14829 653 aaPredicted RBP18.71■□□□□ 0.59
ATAD3A-206ENST00000439513 POTEIP0CG38 1075 aa18.71■□□□□ 0.59
ATAD3A-206ENST00000439513 POTEJP0CG39 1038 aa18.71■□□□□ 0.59
ATAD3A-206ENST00000439513 L3MBTL3Q96JM7 780 aaPredicted RBP18.71■□□□□ 0.59
ATAD3A-206ENST00000439513 ABCC4O15439 1325 aa18.71■□□□□ 0.59
ATAD3A-206ENST00000439513 FZD9O00144 591 aa18.7■□□□□ 0.58
ATAD3A-206ENST00000439513 TCERG1O14776 1098 aaKnown RBP18.7■□□□□ 0.58
ATAD3A-206ENST00000439513 GNAI1P63096 354 aa18.7■□□□□ 0.58
ATAD3A-206ENST00000439513 CC2D2BQ6DHV5 1058 aa18.7■□□□□ 0.58
ATAD3A-206ENST00000439513 ANKRD13DQ6ZTN6 518 aa18.7■□□□□ 0.58
ATAD3A-206ENST00000439513 ISCA1Q9BUE6 129 aa18.7■□□□□ 0.58
ATAD3A-206ENST00000439513 TRMT112Q9UI30 125 aaKnown RBP18.7■□□□□ 0.58
ATAD3A-206ENST00000439513 DDX60Q8IY21 1712 aaKnown RBP18.69■□□□□ 0.58
ATAD3A-206ENST00000439513 ELL2O00472 640 aaPredicted RBP18.69■□□□□ 0.58
ATAD3A-206ENST00000439513 C8orf58Q8NAV2 365 aa18.69■□□□□ 0.58
ATAD3A-206ENST00000439513 HYPKQ9NX55 129 aa18.69■□□□□ 0.58
ATAD3A-206ENST00000439513 SH3TC1Q8TE82 1336 aa18.69■□□□□ 0.58
ATAD3A-206ENST00000439513 SCN4AP35499 1836 aa18.68■□□□□ 0.58
ATAD3A-206ENST00000439513 ATP5J2-PTCD1G3V325 749 aa18.68■□□□□ 0.58
ATAD3A-206ENST00000439513 CALD1Q05682 793 aaKnown RBP18.68■□□□□ 0.58
ATAD3A-206ENST00000439513 PHAXQ9H814 394 aaKnown RBP18.68■□□□□ 0.58
ATAD3A-206ENST00000439513 TAF1P21675 1872 aa18.67■□□□□ 0.58
ATAD3A-206ENST00000439513 KLRG1Q96E93 195 aa18.67■□□□□ 0.58
ATAD3A-206ENST00000439513 TAF1DQ9H5J8 278 aaPredicted RBP18.67■□□□□ 0.58
ATAD3A-206ENST00000439513 ATP6V0A2Q9Y487 856 aa18.67■□□□□ 0.58
ATAD3A-206ENST00000439513 COL4A1P02462 1669 aa18.66■□□□□ 0.58
ATAD3A-206ENST00000439513 ZNF316A6NFI3 1004 aaPredicted RBP18.66■□□□□ 0.58
ATAD3A-206ENST00000439513 TSPYL6Q8N831 410 aa18.66■□□□□ 0.58
ATAD3A-206ENST00000439513 IQCA1LA6NCM1 817 aa18.65■□□□□ 0.58
ATAD3A-206ENST00000439513 GRIPAP1Q4V328 841 aa18.65■□□□□ 0.58
ATAD3A-206ENST00000439513 CHADLQ6NUI6 762 aa18.65■□□□□ 0.58
ATAD3A-206ENST00000439513 FAM89AQ96GI7 184 aa18.65■□□□□ 0.58
ATAD3A-206ENST00000439513 ADAMTSL1Q8N6G6 1762 aa18.65■□□□□ 0.58
ATAD3A-206ENST00000439513 LTBP1Q14766 1721 aa18.64■□□□□ 0.57
ATAD3A-206ENST00000439513 TRIM28Q13263 835 aaKnown RBP18.64■□□□□ 0.57
ATAD3A-206ENST00000439513 JDP2Q8WYK2 163 aa18.64■□□□□ 0.57
ATAD3A-206ENST00000439513 TSR2Q969E8 191 aaKnown RBP18.64■□□□□ 0.57
ATAD3A-206ENST00000439513 BBOX1O75936 387 aa18.63■□□□□ 0.57
ATAD3A-206ENST00000439513 GRAPQ13588 217 aa18.63■□□□□ 0.57
ATAD3A-206ENST00000439513 CCDC27Q2M243 656 aa18.63■□□□□ 0.57
ATAD3A-206ENST00000439513 DDX46Q7L014 1031 aaKnown RBP18.63■□□□□ 0.57
ATAD3A-206ENST00000439513 WWC1Q8IX03 1113 aa18.63■□□□□ 0.57
ATAD3A-206ENST00000439513 GPC2Q8N158 579 aa18.63■□□□□ 0.57
ATAD3A-206ENST00000439513 LARGE2Q8N3Y3 721 aa18.63■□□□□ 0.57
ATAD3A-206ENST00000439513 GRAPLQ8TC17 118 aaPredicted RBP18.63■□□□□ 0.57
ATAD3A-206ENST00000439513 RTFDC1Q9BY42 306 aaPredicted RBP18.63■□□□□ 0.57
ATAD3A-206ENST00000439513 GOLGA2Q08379 1002 aa18.62■□□□□ 0.57
ATAD3A-206ENST00000439513 AOC3Q16853 763 aa18.62■□□□□ 0.57
ATAD3A-206ENST00000439513 RTL5Q5HYW3 569 aaPredicted RBP18.62■□□□□ 0.57
ATAD3A-206ENST00000439513 LDHDQ86WU2 507 aa18.62■□□□□ 0.57
ATAD3A-206ENST00000439513 SP8Q8IXZ3 490 aa18.62■□□□□ 0.57
ATAD3A-206ENST00000439513 JMYQ8N9B5 988 aa18.62■□□□□ 0.57
ATAD3A-206ENST00000439513 MRS2Q9HD23 443 aa18.62■□□□□ 0.57
ATAD3A-206ENST00000439513 HACL1Q9UJ83 578 aa18.62■□□□□ 0.57
ATAD3A-206ENST00000439513 DUOX1Q9NRD9 1551 aa18.62■□□□□ 0.57
ATAD3A-206ENST00000439513 LRRC37AA6NMS7 1700 aa18.62■□□□□ 0.57
ATAD3A-206ENST00000439513 PPIP5K2O43314 1243 aa18.61■□□□□ 0.57
ATAD3A-206ENST00000439513 EPHX2P34913 555 aa18.61■□□□□ 0.57
ATAD3A-206ENST00000439513 EIF6P56537 245 aaKnown RBP18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms