RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 CTAGE5O15320 804 aa7.39□□□□□ -1.23
BDNF-211ENST00000439476 ATF3P18847 181 aa7.39□□□□□ -1.23
BDNF-211ENST00000439476 MFSD4BQ5TF39 518 aa7.39□□□□□ -1.23
BDNF-211ENST00000439476 KIF6Q6ZMV9 814 aa7.39□□□□□ -1.23
BDNF-211ENST00000439476 ANKRD18AQ8IVF6 992 aa7.39□□□□□ -1.23
BDNF-211ENST00000439476 DDX11Q96FC9 970 aa7.39□□□□□ -1.23
BDNF-211ENST00000439476 PRM3Q9NNZ6 103 aa7.39□□□□□ -1.23
BDNF-211ENST00000439476 SYNMO15061 1565 aa7.39□□□□□ -1.23
BDNF-211ENST00000439476 GNAT3A8MTJ3 354 aa7.39□□□□□ -1.23
BDNF-211ENST00000439476 WASLO00401 505 aaPredicted RBP7.39□□□□□ -1.23
BDNF-211ENST00000439476 SARNPP82979 210 aaKnown RBP7.39□□□□□ -1.23
BDNF-211ENST00000439476 CDK5RAP3Q96JB5 506 aa7.39□□□□□ -1.23
BDNF-211ENST00000439476 CEP131Q9UPN4 1083 aa7.39□□□□□ -1.23
BDNF-211ENST00000439476 PLA2R1Q13018 1463 aa7.39□□□□□ -1.23
BDNF-211ENST00000439476 KDM5AP29375 1690 aaKnown RBP7.39□□□□□ -1.23
BDNF-211ENST00000439476 PKP1Q13835 747 aa7.39□□□□□ -1.23
BDNF-211ENST00000439476 PPP2R5AQ15172 486 aa7.39□□□□□ -1.23
BDNF-211ENST00000439476 SERPINC1P01008 464 aa7.39□□□□□ -1.23
BDNF-211ENST00000439476 GSPT1P15170 499 aaKnown RBP7.39□□□□□ -1.23
BDNF-211ENST00000439476 CAPN2P17655 700 aa7.39□□□□□ -1.23
BDNF-211ENST00000439476 ZNF165P49910 485 aa7.39□□□□□ -1.23
BDNF-211ENST00000439476 CCDC57Q2TAC2 916 aa7.39□□□□□ -1.23
BDNF-211ENST00000439476 ABTB2Q8N961 1025 aa7.39□□□□□ -1.23
BDNF-211ENST00000439476 DDX19AQ9NUU7 478 aaKnown RBP7.39□□□□□ -1.23
BDNF-211ENST00000439476 MTMR7Q9Y216 660 aa7.39□□□□□ -1.23
BDNF-211ENST00000439476 KIAA0754O94854 1291 aa7.38□□□□□ -1.23
BDNF-211ENST00000439476 F13A1P00488 732 aa7.38□□□□□ -1.23
BDNF-211ENST00000439476 CCDC186Q7Z3E2 898 aa7.38□□□□□ -1.23
BDNF-211ENST00000439476 PPP1R42Q7Z4L9 355 aa7.38□□□□□ -1.23
BDNF-211ENST00000439476 KIF18AQ8NI77 898 aa7.38□□□□□ -1.23
BDNF-211ENST00000439476 POLR1AO95602 1720 aaPredicted RBP7.38□□□□□ -1.23
BDNF-211ENST00000439476 FAM177BA6PVY3 158 aa7.38□□□□□ -1.23
BDNF-211ENST00000439476 TATP17735 454 aaPredicted RBP7.38□□□□□ -1.23
BDNF-211ENST00000439476 CHMLP26374 656 aa7.38□□□□□ -1.23
BDNF-211ENST00000439476 DNM1Q05193 864 aaKnown RBP7.38□□□□□ -1.23
BDNF-211ENST00000439476 SYCP1Q15431 976 aa7.38□□□□□ -1.23
BDNF-211ENST00000439476 TAF7Q15545 349 aaPredicted RBP7.38□□□□□ -1.23
BDNF-211ENST00000439476 FAM200AQ8TCP9 573 aa7.38□□□□□ -1.23
BDNF-211ENST00000439476 ERVK-7P63135 1459 aa7.38□□□□□ -1.23
BDNF-211ENST00000439476 ZSCAN12O43309 604 aa7.37□□□□□ -1.23
BDNF-211ENST00000439476 BRPF1P55201 1214 aaPredicted RBP7.37□□□□□ -1.23
BDNF-211ENST00000439476 ATP8B2P98198 1209 aa7.37□□□□□ -1.23
BDNF-211ENST00000439476 NBPF10Q6P3W6 841 aaKnown RBP7.37□□□□□ -1.23
BDNF-211ENST00000439476 NLRP2Q9NX02 1062 aa7.37□□□□□ -1.23
BDNF-211ENST00000439476 HSP90AB2PQ58FF8 381 aa7.37□□□□□ -1.23
BDNF-211ENST00000439476 NECAB1Q8N987 351 aa7.37□□□□□ -1.23
BDNF-211ENST00000439476 RHPN1Q8TCX5 695 aa7.37□□□□□ -1.23
BDNF-211ENST00000439476 DRC1Q96MC2 740 aa7.37□□□□□ -1.23
BDNF-211ENST00000439476 SLC26A8Q96RN1 970 aa7.37□□□□□ -1.23
BDNF-211ENST00000439476 FAM107BQ9H098 131 aa7.37□□□□□ -1.23
BDNF-211ENST00000439476 PHAXQ9H814 394 aaKnown RBP7.37□□□□□ -1.23
BDNF-211ENST00000439476 TRMT1Q9NXH9 659 aaKnown RBP7.37□□□□□ -1.23
BDNF-211ENST00000439476 ZRANB1Q9UGI0 708 aa7.37□□□□□ -1.23
BDNF-211ENST00000439476 FBXO31Q5XUX0 539 aaPredicted RBP7.37□□□□□ -1.23
BDNF-211ENST00000439476 MYRIPQ8NFW9 859 aa7.37□□□□□ -1.23
BDNF-211ENST00000439476 SIRT1Q96EB6 747 aa7.37□□□□□ -1.23
BDNF-211ENST00000439476 BOLA2Q9H3K6 86 aa7.37□□□□□ -1.23
BDNF-211ENST00000439476 BMP2KQ9NSY1 1161 aaPredicted RBP7.37□□□□□ -1.23
BDNF-211ENST00000439476 ECHDC1Q9NTX5 307 aa7.37□□□□□ -1.23
BDNF-211ENST00000439476 THEMISQ8N1K5 641 aaPredicted RBP7.37□□□□□ -1.23
BDNF-211ENST00000439476 GPT2Q8TD30 523 aa7.37□□□□□ -1.23
BDNF-211ENST00000439476 PIBF1Q8WXW3 757 aa7.37□□□□□ -1.23
BDNF-211ENST00000439476 UBXN4Q92575 508 aa7.37□□□□□ -1.23
BDNF-211ENST00000439476 SBNO2Q9Y2G9 1366 aa7.37□□□□□ -1.23
BDNF-211ENST00000439476 TRPM1Q7Z4N2 1603 aa7.36□□□□□ -1.23
BDNF-211ENST00000439476 CLASP1Q7Z460 1538 aa7.36□□□□□ -1.23
BDNF-211ENST00000439476 AK2P54819 239 aa7.36□□□□□ -1.23
BDNF-211ENST00000439476 CCDC96Q2M329 555 aa7.36□□□□□ -1.23
BDNF-211ENST00000439476 MAP9Q49MG5 647 aa7.36□□□□□ -1.23
BDNF-211ENST00000439476 TTC39AQ5SRH9 613 aa7.36□□□□□ -1.23
BDNF-211ENST00000439476 C17orf53Q8N3J3 647 aaPredicted RBP7.36□□□□□ -1.23
BDNF-211ENST00000439476 ATL2Q8NHH9 583 aa7.36□□□□□ -1.23
BDNF-211ENST00000439476 ANO10Q9NW15 660 aa7.36□□□□□ -1.23
BDNF-211ENST00000439476 ERCC6L2Q5T890 1561 aa7.36□□□□□ -1.23
BDNF-211ENST00000439476 GOLGA6L9A6NEM1 432 aa7.36□□□□□ -1.23
BDNF-211ENST00000439476 SYT1P21579 422 aa7.36□□□□□ -1.23
BDNF-211ENST00000439476 ATP2B3Q16720 1220 aa7.36□□□□□ -1.23
BDNF-211ENST00000439476 ZNF530Q6P9A1 599 aaPredicted RBP7.36□□□□□ -1.23
BDNF-211ENST00000439476 CHAMP1Q96JM3 812 aa7.36□□□□□ -1.23
BDNF-211ENST00000439476 PAXBP1Q9Y5B6 917 aa7.36□□□□□ -1.23
BDNF-211ENST00000439476 ZFYVE9O95405 1425 aa7.36□□□□□ -1.23
BDNF-211ENST00000439476 MSH6P52701 1360 aa7.36□□□□□ -1.23
BDNF-211ENST00000439476 POTEB2H3BUK9 544 aa7.36□□□□□ -1.23
BDNF-211ENST00000439476 GADD45BO75293 160 aaPredicted RBP7.36□□□□□ -1.23
BDNF-211ENST00000439476 BRD1O95696 1058 aa7.36□□□□□ -1.23
BDNF-211ENST00000439476 TUBB4AP04350 444 aa7.36□□□□□ -1.23
BDNF-211ENST00000439476 SFPQP23246 707 aaKnown RBP eCLIP7.36□□□□□ -1.23
BDNF-211ENST00000439476 ANO6Q4KMQ2 910 aa7.36□□□□□ -1.23
BDNF-211ENST00000439476 CCDC181Q5TID7 509 aa7.36□□□□□ -1.23
BDNF-211ENST00000439476 DNAAF4Q8WXU2 420 aa7.36□□□□□ -1.23
BDNF-211ENST00000439476 PLEKHF1Q96S99 279 aa7.36□□□□□ -1.23
BDNF-211ENST00000439476 PYM1Q9BRP8 204 aaKnown RBP7.36□□□□□ -1.23
BDNF-211ENST00000439476 DACT1Q9NYF0 836 aa7.36□□□□□ -1.23
BDNF-211ENST00000439476 PPIP5K1Q6PFW1 1433 aa7.36□□□□□ -1.23
BDNF-211ENST00000439476 ABCC4O15439 1325 aa7.36□□□□□ -1.23
BDNF-211ENST00000439476 IBTKQ9P2D0 1353 aaPredicted RBP7.35□□□□□ -1.23
BDNF-211ENST00000439476 CCDC196A0A1B0GTZ2 297 aa7.35□□□□□ -1.23
BDNF-211ENST00000439476 CEP135Q66GS9 1140 aa7.35□□□□□ -1.23
BDNF-211ENST00000439476 PIAS4Q8N2W9 510 aaPredicted RBP7.35□□□□□ -1.23
BDNF-211ENST00000439476 CCDC8Q9H0W5 538 aaPredicted RBP7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms