RNA–Protein interactions for RNA: ENST00000439372.5

ATP6AP1-204, Transcript of ATPase H+ transporting accessory protein 1, humanhuman

TSL 4

Gene ATP6AP1, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP1-204ENST00000439372 PTPRCP08575 1304 aa29.37■■■□□ 2.29
ATP6AP1-204ENST00000439372 ERFEQ4G0M1 354 aa29.36■■■□□ 2.29
ATP6AP1-204ENST00000439372 DNAAF4Q8WXU2 420 aa29.36■■■□□ 2.29
ATP6AP1-204ENST00000439372 UTP14AQ9BVJ6 771 aaKnown RBP29.36■■■□□ 2.29
ATP6AP1-204ENST00000439372 BRCA1P38398 1863 aaKnown RBP29.36■■■□□ 2.29
ATP6AP1-204ENST00000439372 DLEC1Q9Y238 1755 aa29.35■■■□□ 2.29
ATP6AP1-204ENST00000439372 IPO8O15397 1037 aaKnown RBP29.35■■■□□ 2.29
ATP6AP1-204ENST00000439372 IGKV5-2P06315 115 aa29.35■■■□□ 2.29
ATP6AP1-204ENST00000439372 TRIM28Q13263 835 aaKnown RBP29.35■■■□□ 2.29
ATP6AP1-204ENST00000439372 A0A0G2JLW4 131 aa29.34■■■□□ 2.29
ATP6AP1-204ENST00000439372 TGFB2P61812 414 aa29.34■■■□□ 2.29
ATP6AP1-204ENST00000439372 NOB1Q9ULX3 412 aaKnown RBP29.34■■■□□ 2.29
ATP6AP1-204ENST00000439372 DPEP1P16444 411 aa29.33■■■□□ 2.29
ATP6AP1-204ENST00000439372 GTF2E1P29083 439 aaPredicted RBP29.33■■■□□ 2.29
ATP6AP1-204ENST00000439372 CHRNA5P30532 468 aa29.33■■■□□ 2.29
ATP6AP1-204ENST00000439372 CWF19L2Q2TBE0 894 aaKnown RBP29.33■■■□□ 2.29
ATP6AP1-204ENST00000439372 SYNE4Q8N205 404 aa29.33■■■□□ 2.29
ATP6AP1-204ENST00000439372 BRIP1Q9BX63 1249 aa29.33■■■□□ 2.29
ATP6AP1-204ENST00000439372 TRMT112Q9UI30 125 aaKnown RBP29.33■■■□□ 2.29
ATP6AP1-204ENST00000439372 LAMB2P55268 1798 aa29.32■■■□□ 2.28
ATP6AP1-204ENST00000439372 DDX60Q8IY21 1712 aaKnown RBP29.32■■■□□ 2.28
ATP6AP1-204ENST00000439372 FRAT1Q92837 279 aaPredicted RBP29.32■■■□□ 2.28
ATP6AP1-204ENST00000439372 NEXNQ0ZGT2 675 aa29.31■■■□□ 2.28
ATP6AP1-204ENST00000439372 ARHGAP45Q92619 1136 aa29.31■■■□□ 2.28
ATP6AP1-204ENST00000439372 NEURL1BA8MQ27 555 aa29.3■■■□□ 2.28
ATP6AP1-204ENST00000439372 KCNA3P22001 575 aa29.3■■■□□ 2.28
ATP6AP1-204ENST00000439372 CCDC191Q8NCU4 936 aa29.3■■■□□ 2.28
ATP6AP1-204ENST00000439372 API5Q9BZZ5 524 aaKnown RBP29.3■■■□□ 2.28
ATP6AP1-204ENST00000439372 CWC25Q9NXE8 425 aaPredicted RBP29.3■■■□□ 2.28
ATP6AP1-204ENST00000439372 WWC3Q9ULE0 1092 aa29.3■■■□□ 2.28
ATP6AP1-204ENST00000439372 PDE6BP35913 854 aa29.29■■■□□ 2.28
ATP6AP1-204ENST00000439372 C2CD5Q86YS7 1000 aa29.29■■■□□ 2.28
ATP6AP1-204ENST00000439372 RIC1Q4ADV7 1423 aa29.28■■■□□ 2.28
ATP6AP1-204ENST00000439372 RNF123Q5XPI4 1314 aa29.28■■■□□ 2.28
ATP6AP1-204ENST00000439372 CACNA1SQ13698 1873 aa29.28■■■□□ 2.28
ATP6AP1-204ENST00000439372 RTL5Q5HYW3 569 aaPredicted RBP29.28■■■□□ 2.28
ATP6AP1-204ENST00000439372 BEND3Q5T5X7 828 aa29.28■■■□□ 2.28
ATP6AP1-204ENST00000439372 FAM89AQ96GI7 184 aa29.28■■■□□ 2.28
ATP6AP1-204ENST00000439372 SH3TC1Q8TE82 1336 aa29.27■■■□□ 2.28
ATP6AP1-204ENST00000439372 ZKSCAN2Q63HK3 967 aa29.27■■■□□ 2.28
ATP6AP1-204ENST00000439372 SLC4A10Q6U841 1118 aa29.27■■■□□ 2.28
ATP6AP1-204ENST00000439372 LINS1Q8NG48 757 aa29.27■■■□□ 2.28
ATP6AP1-204ENST00000439372 JARID2Q92833 1246 aaPredicted RBP29.27■■■□□ 2.28
ATP6AP1-204ENST00000439372 C3orf67Q6ZVT6 689 aa29.26■■■□□ 2.27
ATP6AP1-204ENST00000439372 HCLS1P14317 486 aaPredicted RBP29.25■■■□□ 2.27
ATP6AP1-204ENST00000439372 SLC10A5Q5PT55 438 aa29.25■■■□□ 2.27
ATP6AP1-204ENST00000439372 KLRG2A4D1S0 409 aaPredicted RBP29.24■■■□□ 2.27
ATP6AP1-204ENST00000439372 H0YIN7 160 aa29.24■■■□□ 2.27
ATP6AP1-204ENST00000439372 PCCAP05165 728 aaPredicted RBP29.24■■■□□ 2.27
ATP6AP1-204ENST00000439372 ATF7IPQ6VMQ6 1270 aa29.24■■■□□ 2.27
ATP6AP1-204ENST00000439372 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.24■■■□□ 2.27
ATP6AP1-204ENST00000439372 ZBTB38Q8NAP3 1195 aaPredicted RBP29.24■■■□□ 2.27
ATP6AP1-204ENST00000439372 GCKRQ14397 625 aa29.23■■■□□ 2.27
ATP6AP1-204ENST00000439372 SRGNP10124 158 aa29.22■■■□□ 2.27
ATP6AP1-204ENST00000439372 PELP1Q8IZL8 1130 aaKnown RBP29.22■■■□□ 2.27
ATP6AP1-204ENST00000439372 PDZRN3Q9UPQ7 1066 aa29.21■■■□□ 2.27
ATP6AP1-204ENST00000439372 TNNQ9UQP3 1299 aa29.21■■■□□ 2.27
ATP6AP1-204ENST00000439372 ARFGEF1Q9Y6D6 1849 aa29.2■■■□□ 2.27
ATP6AP1-204ENST00000439372 IRS4O14654 1257 aaPredicted RBP29.2■■■□□ 2.26
ATP6AP1-204ENST00000439372 MS4A1P11836 297 aa29.2■■■□□ 2.26
ATP6AP1-204ENST00000439372 TRIM27P14373 513 aa29.2■■■□□ 2.26
ATP6AP1-204ENST00000439372 YBX3P16989 372 aaKnown RBP eCLIP29.2■■■□□ 2.26
ATP6AP1-204ENST00000439372 ZNF622Q969S3 477 aaKnown RBP eCLIP29.2■■■□□ 2.26
ATP6AP1-204ENST00000439372 SRCIN1Q9C0H9 1055 aa29.2■■■□□ 2.26
ATP6AP1-204ENST00000439372 PIM2Q9P1W9 311 aa29.2■■■□□ 2.26
ATP6AP1-204ENST00000439372 MYH3P11055 1940 aa29.2■■■□□ 2.26
ATP6AP1-204ENST00000439372 H7C1W4 665 aa29.19■■■□□ 2.26
ATP6AP1-204ENST00000439372 ALDH1L1O75891 902 aa29.19■■■□□ 2.26
ATP6AP1-204ENST00000439372 CRY2Q49AN0 593 aa29.19■■■□□ 2.26
ATP6AP1-204ENST00000439372 NLRP3Q96P20 1036 aa29.19■■■□□ 2.26
ATP6AP1-204ENST00000439372 SLX4Q8IY92 1834 aa29.19■■■□□ 2.26
ATP6AP1-204ENST00000439372 UBE3BQ7Z3V4 1068 aa29.18■■■□□ 2.26
ATP6AP1-204ENST00000439372 MASTLQ96GX5 879 aa29.18■■■□□ 2.26
ATP6AP1-204ENST00000439372 TAF1P21675 1872 aa29.18■■■□□ 2.26
ATP6AP1-204ENST00000439372 CDHR2Q9BYE9 1310 aa29.18■■■□□ 2.26
ATP6AP1-204ENST00000439372 NPR1P16066 1061 aa29.17■■■□□ 2.26
ATP6AP1-204ENST00000439372 CCT4P50991 539 aaKnown RBP29.17■■■□□ 2.26
ATP6AP1-204ENST00000439372 GPR162Q16538 588 aa29.17■■■□□ 2.26
ATP6AP1-204ENST00000439372 STYK1Q6J9G0 422 aa29.17■■■□□ 2.26
ATP6AP1-204ENST00000439372 FTSJ3Q8IY81 847 aaKnown RBP29.17■■■□□ 2.26
ATP6AP1-204ENST00000439372 BCS1LQ9Y276 419 aa29.17■■■□□ 2.26
ATP6AP1-204ENST00000439372 CASP7P55210 303 aa29.16■■■□□ 2.26
ATP6AP1-204ENST00000439372 DZIP1LQ8IYY4 767 aaKnown RBP29.16■■■□□ 2.26
ATP6AP1-204ENST00000439372 CLUAP1Q96AJ1 413 aa29.16■■■□□ 2.26
ATP6AP1-204ENST00000439372 DALRD3Q5D0E6 543 aaKnown RBP29.15■■■□□ 2.26
ATP6AP1-204ENST00000439372 ABCC4O15439 1325 aa29.15■■■□□ 2.26
ATP6AP1-204ENST00000439372 TTLL6Q8N841 843 aa29.14■■■□□ 2.26
ATP6AP1-204ENST00000439372 PLIN1O60240 522 aa29.13■■■□□ 2.25
ATP6AP1-204ENST00000439372 PDE8AO60658 829 aa29.13■■■□□ 2.25
ATP6AP1-204ENST00000439372 CENPBP07199 599 aaPredicted RBP29.13■■■□□ 2.25
ATP6AP1-204ENST00000439372 RPGRQ92834 1020 aaKnown RBP29.13■■■□□ 2.25
ATP6AP1-204ENST00000439372 GRM8O00222 908 aa29.12■■■□□ 2.25
ATP6AP1-204ENST00000439372 HOXA10P31260 410 aaPredicted RBP29.12■■■□□ 2.25
ATP6AP1-204ENST00000439372 INTS3Q68E01 1043 aaKnown RBP29.12■■■□□ 2.25
ATP6AP1-204ENST00000439372 CNKSR1Q969H4 720 aa29.12■■■□□ 2.25
ATP6AP1-204ENST00000439372 COL4A1P02462 1669 aa29.12■■■□□ 2.25
ATP6AP1-204ENST00000439372 C9orf78Q9NZ63 289 aaPredicted RBP29.11■■■□□ 2.25
ATP6AP1-204ENST00000439372 HSP90B1P14625 803 aaKnown RBP29.1■■■□□ 2.25
ATP6AP1-204ENST00000439372 SF3B3Q15393 1217 aaKnown RBP29.1■■■□□ 2.25
ATP6AP1-204ENST00000439372 PRPF40BQ6NWY9 871 aaKnown RBP29.1■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms