RNA–Protein interactions for RNA: ENST00000439027.1

AC011228.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC011228.1, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011228.1-201ENST00000439027 KLRG1Q96E93 195 aa12.08□□□□□ -0.48
AC011228.1-201ENST00000439027 SLX4Q8IY92 1834 aa12.08□□□□□ -0.48
AC011228.1-201ENST00000439027 LTBP3Q9NS15 1303 aa12.08□□□□□ -0.48
AC011228.1-201ENST00000439027 TNRC6CQ9HCJ0 1690 aaKnown RBP12.07□□□□□ -0.48
AC011228.1-201ENST00000439027 RGL2O15211 777 aa12.07□□□□□ -0.48
AC011228.1-201ENST00000439027 COL11A2P13942 1736 aaPredicted RBP12.07□□□□□ -0.48
AC011228.1-201ENST00000439027 CCDC93Q567U6 631 aa12.07□□□□□ -0.48
AC011228.1-201ENST00000439027 RASEFQ8IZ41 740 aa12.07□□□□□ -0.48
AC011228.1-201ENST00000439027 MYBBP1AQ9BQG0 1328 aaKnown RBP12.07□□□□□ -0.48
AC011228.1-201ENST00000439027 POTECB2RU33 542 aa12.06□□□□□ -0.48
AC011228.1-201ENST00000439027 CCER2I3L3R5 266 aa12.06□□□□□ -0.48
AC011228.1-201ENST00000439027 DDNO94850 711 aaPredicted RBP12.06□□□□□ -0.48
AC011228.1-201ENST00000439027 GPTP24298 496 aa12.06□□□□□ -0.48
AC011228.1-201ENST00000439027 OLFM4Q6UX06 510 aa12.06□□□□□ -0.48
AC011228.1-201ENST00000439027 TTLL7Q6ZT98 887 aa12.06□□□□□ -0.48
AC011228.1-201ENST00000439027 C7orf43Q8WVR3 580 aa12.06□□□□□ -0.48
AC011228.1-201ENST00000439027 NYXQ9GZU5 481 aa12.06□□□□□ -0.48
AC011228.1-201ENST00000439027 ZBTB3Q9H5J0 574 aa12.06□□□□□ -0.48
AC011228.1-201ENST00000439027 TSPYL4Q9UJ04 414 aa12.06□□□□□ -0.48
AC011228.1-201ENST00000439027 MAP3K15Q6ZN16 1313 aa12.06□□□□□ -0.48
AC011228.1-201ENST00000439027 BCORQ6W2J9 1755 aa12.05□□□□□ -0.48
AC011228.1-201ENST00000439027 KLRG2A4D1S0 409 aaPredicted RBP12.05□□□□□ -0.48
AC011228.1-201ENST00000439027 ERVV-1B6SEH8 477 aa12.05□□□□□ -0.48
AC011228.1-201ENST00000439027 ALDH1B1P30837 517 aa12.05□□□□□ -0.48
AC011228.1-201ENST00000439027 RIPK4P57078 832 aa12.05□□□□□ -0.48
AC011228.1-201ENST00000439027 NUTM1Q86Y26 1132 aa12.05□□□□□ -0.48
AC011228.1-201ENST00000439027 ZNF277Q9NRM2 450 aaPredicted RBP12.05□□□□□ -0.48
AC011228.1-201ENST00000439027 FER1L6Q2WGJ9 1857 aa12.04□□□□□ -0.48
AC011228.1-201ENST00000439027 TIAM2Q8IVF5 1701 aa12.04□□□□□ -0.48
AC011228.1-201ENST00000439027 WDR90Q96KV7 1748 aa12.04□□□□□ -0.48
AC011228.1-201ENST00000439027 EIF2S2P20042 333 aaKnown RBP12.04□□□□□ -0.48
AC011228.1-201ENST00000439027 NUBP1P53384 320 aa12.04□□□□□ -0.48
AC011228.1-201ENST00000439027 FKBP4Q02790 459 aaKnown RBP eCLIP12.04□□□□□ -0.48
AC011228.1-201ENST00000439027 CCDC184Q52MB2 194 aa12.04□□□□□ -0.48
AC011228.1-201ENST00000439027 RTKN2Q8IZC4 609 aa12.04□□□□□ -0.48
AC011228.1-201ENST00000439027 CACNA1SQ13698 1873 aa12.04□□□□□ -0.48
AC011228.1-201ENST00000439027 DLG5Q8TDM6 1919 aa12.03□□□□□ -0.48
AC011228.1-201ENST00000439027 GALR2O43603 387 aaPredicted RBP12.03□□□□□ -0.48
AC011228.1-201ENST00000439027 SYNE4Q8N205 404 aa12.03□□□□□ -0.48
AC011228.1-201ENST00000439027 RPGRQ92834 1020 aaKnown RBP12.03□□□□□ -0.48
AC011228.1-201ENST00000439027 MRS2Q9HD23 443 aa12.03□□□□□ -0.48
AC011228.1-201ENST00000439027 DICER1Q9UPY3 1922 aaKnown RBP12.02□□□□□ -0.49
AC011228.1-201ENST00000439027 IQCA1LA6NCM1 817 aa12.02□□□□□ -0.49
AC011228.1-201ENST00000439027 TCERG1O14776 1098 aaKnown RBP12.02□□□□□ -0.49
AC011228.1-201ENST00000439027 LMOD3Q0VAK6 560 aa12.02□□□□□ -0.49
AC011228.1-201ENST00000439027 NEUROD2Q15784 382 aa12.02□□□□□ -0.49
AC011228.1-201ENST00000439027 SUSD4Q5VX71 490 aa12.02□□□□□ -0.49
AC011228.1-201ENST00000439027 JMYQ8N9B5 988 aa12.02□□□□□ -0.49
AC011228.1-201ENST00000439027 ABCC12Q96J65 1359 aa12.02□□□□□ -0.49
AC011228.1-201ENST00000439027 ANXA1P04083 346 aa12.01□□□□□ -0.49
AC011228.1-201ENST00000439027 POTEIP0CG38 1075 aa12.01□□□□□ -0.49
AC011228.1-201ENST00000439027 POTEJP0CG39 1038 aa12.01□□□□□ -0.49
AC011228.1-201ENST00000439027 TMPOP42166 694 aaKnown RBP12.01□□□□□ -0.49
AC011228.1-201ENST00000439027 EAPPQ56P03 285 aaPredicted RBP12.01□□□□□ -0.49
AC011228.1-201ENST00000439027 CCDC146Q8IYE0 955 aa12.01□□□□□ -0.49
AC011228.1-201ENST00000439027 NECTIN2Q92692 538 aa12.01□□□□□ -0.49
AC011228.1-201ENST00000439027 RBM17Q96I25 401 aaKnown RBP12.01□□□□□ -0.49
AC011228.1-201ENST00000439027 ERBB4Q15303 1308 aa12.01□□□□□ -0.49
AC011228.1-201ENST00000439027 IARSP41252 1262 aaKnown RBP12□□□□□ -0.49
AC011228.1-201ENST00000439027 CRY2Q49AN0 593 aa12□□□□□ -0.49
AC011228.1-201ENST00000439027 GIGYF2Q6Y7W6 1299 aaKnown RBP12□□□□□ -0.49
AC011228.1-201ENST00000439027 PPP1R42Q7Z4L9 355 aa12□□□□□ -0.49
AC011228.1-201ENST00000439027 ZNF34Q8IZ26 560 aa12□□□□□ -0.49
AC011228.1-201ENST00000439027 JDP2Q8WYK2 163 aa12□□□□□ -0.49
AC011228.1-201ENST00000439027 LAS1LQ9Y4W2 734 aaKnown RBP12□□□□□ -0.49
AC011228.1-201ENST00000439027 UBN2Q6ZU65 1347 aa12□□□□□ -0.49
AC011228.1-201ENST00000439027 ZNF541Q9H0D2 1346 aa12□□□□□ -0.49
AC011228.1-201ENST00000439027 LAMB4A4D0S4 1761 aa12□□□□□ -0.49
AC011228.1-201ENST00000439027 KDM3BQ7LBC6 1761 aa12□□□□□ -0.49
AC011228.1-201ENST00000439027 HOXA10P31260 410 aaPredicted RBP11.99□□□□□ -0.49
AC011228.1-201ENST00000439027 AIMP1Q12904 312 aaKnown RBP11.99□□□□□ -0.49
AC011228.1-201ENST00000439027 WDR43Q15061 677 aaKnown RBP eCLIP11.99□□□□□ -0.49
AC011228.1-201ENST00000439027 PROSER3Q2NL68 480 aa11.99□□□□□ -0.49
AC011228.1-201ENST00000439027 PARP10Q53GL7 1025 aa11.99□□□□□ -0.49
AC011228.1-201ENST00000439027 CC2D2BQ6DHV5 1058 aa11.99□□□□□ -0.49
AC011228.1-201ENST00000439027 L3MBTL3Q96JM7 780 aaPredicted RBP11.99□□□□□ -0.49
AC011228.1-201ENST00000439027 UTP14AQ9BVJ6 771 aaKnown RBP11.99□□□□□ -0.49
AC011228.1-201ENST00000439027 TMX4Q9H1E5 349 aaPredicted RBP11.99□□□□□ -0.49
AC011228.1-201ENST00000439027 TAF1DQ9H5J8 278 aaPredicted RBP11.99□□□□□ -0.49
AC011228.1-201ENST00000439027 BABAM1Q9NWV8 329 aa11.99□□□□□ -0.49
AC011228.1-201ENST00000439027 HACL1Q9UJ83 578 aa11.99□□□□□ -0.49
AC011228.1-201ENST00000439027 NUP98P52948 1817 aa11.99□□□□□ -0.49
AC011228.1-201ENST00000439027 ARFGEF2Q9Y6D5 1785 aa11.98□□□□□ -0.49
AC011228.1-201ENST00000439027 NTSR2O95665 410 aa11.98□□□□□ -0.49
AC011228.1-201ENST00000439027 PDIA6Q15084 440 aa11.98□□□□□ -0.49
AC011228.1-201ENST00000439027 C3orf67Q6ZVT6 689 aa11.98□□□□□ -0.49
AC011228.1-201ENST00000439027 LDHDQ86WU2 507 aa11.98□□□□□ -0.49
AC011228.1-201ENST00000439027 NLRP3Q96P20 1036 aa11.98□□□□□ -0.49
AC011228.1-201ENST00000439027 DCBLD2Q96PD2 775 aa11.98□□□□□ -0.49
AC011228.1-201ENST00000439027 CRAMP1Q96RY5 1269 aa11.98□□□□□ -0.49
AC011228.1-201ENST00000439027 PSMD1Q99460 953 aa11.98□□□□□ -0.49
AC011228.1-201ENST00000439027 MKRN1Q9UHC7 482 aaKnown RBP11.98□□□□□ -0.49
AC011228.1-201ENST00000439027 GJA3Q9Y6H8 435 aa11.98□□□□□ -0.49
AC011228.1-201ENST00000439027 IBTKQ9P2D0 1353 aaPredicted RBP11.97□□□□□ -0.49
AC011228.1-201ENST00000439027 PPEF1O14829 653 aaPredicted RBP11.97□□□□□ -0.49
AC011228.1-201ENST00000439027 EPHX2P34913 555 aa11.97□□□□□ -0.49
AC011228.1-201ENST00000439027 EIF6P56537 245 aaKnown RBP11.97□□□□□ -0.49
AC011228.1-201ENST00000439027 COPS6Q7L5N1 327 aa11.97□□□□□ -0.49
AC011228.1-201ENST00000439027 LARGE2Q8N3Y3 721 aa11.97□□□□□ -0.49
AC011228.1-201ENST00000439027 XAGE3Q8WTP9 111 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms