RNA–Protein interactions for RNA: ENST00000437929.5

TOP3B-208, Transcript of DNA topoisomerase III beta, humanhuman

TSL 4

Gene TOP3B, Length 550 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-208ENST00000437929 WDR90Q96KV7 1748 aa9.64□□□□□ -0.87
TOP3B-208ENST00000437929 KIAA1551Q9HCM1 1747 aa9.64□□□□□ -0.87
TOP3B-208ENST00000437929 NSD3Q9BZ95 1437 aa9.64□□□□□ -0.87
TOP3B-208ENST00000437929 MAP2P11137 1827 aaKnown RBP9.63□□□□□ -0.87
TOP3B-208ENST00000437929 LOC102724428A0A0B4J2F2 783 aa9.63□□□□□ -0.87
TOP3B-208ENST00000437929 A0A0G2JLW4 131 aa9.63□□□□□ -0.87
TOP3B-208ENST00000437929 RNF40O75150 1001 aa9.63□□□□□ -0.87
TOP3B-208ENST00000437929 MMP10P09238 476 aa9.63□□□□□ -0.87
TOP3B-208ENST00000437929 CD46P15529 392 aa9.63□□□□□ -0.87
TOP3B-208ENST00000437929 SIK1P57059 783 aa9.63□□□□□ -0.87
TOP3B-208ENST00000437929 LSM11P83369 360 aaKnown RBP eCLIP9.63□□□□□ -0.874e-6■■■■□ 19.9
TOP3B-208ENST00000437929 ITPK1Q13572 414 aa9.63□□□□□ -0.87
TOP3B-208ENST00000437929 COL13A1Q5TAT6 717 aaPredicted RBP9.63□□□□□ -0.87
TOP3B-208ENST00000437929 ARHGAP27Q6ZUM4 889 aa9.63□□□□□ -0.87
TOP3B-208ENST00000437929 TBC1D2Q9BYX2 928 aa9.63□□□□□ -0.87
TOP3B-208ENST00000437929 PKD1L3Q7Z443 1732 aa9.62□□□□□ -0.87
TOP3B-208ENST00000437929 ST20-MTHFSA0A0A6YYL1 179 aa9.62□□□□□ -0.87
TOP3B-208ENST00000437929 FYB1O15117 783 aa9.62□□□□□ -0.87
TOP3B-208ENST00000437929 HMGB2P26583 209 aaKnown RBP9.62□□□□□ -0.87
TOP3B-208ENST00000437929 ATP6V1AP38606 617 aa9.62□□□□□ -0.87
TOP3B-208ENST00000437929 ANKRD13DQ6ZTN6 518 aa9.62□□□□□ -0.87
TOP3B-208ENST00000437929 NUTM1Q86Y26 1132 aa9.62□□□□□ -0.87
TOP3B-208ENST00000437929 PUS7Q96PZ0 661 aaKnown RBP9.62□□□□□ -0.87
TOP3B-208ENST00000437929 TESK2Q96S53 571 aa9.62□□□□□ -0.87
TOP3B-208ENST00000437929 GOPCQ9HD26 462 aa9.62□□□□□ -0.87
TOP3B-208ENST00000437929 ASAP1Q9ULH1 1129 aa9.62□□□□□ -0.87
TOP3B-208ENST00000437929 PCNTO95613 3336 aa9.62□□□□□ -0.87
TOP3B-208ENST00000437929 INSRP06213 1382 aa9.62□□□□□ -0.87
TOP3B-208ENST00000437929 FLT4P35916 1363 aa9.62□□□□□ -0.87
TOP3B-208ENST00000437929 TK2O00142 265 aa9.61□□□□□ -0.87
TOP3B-208ENST00000437929 SLC4A3P48751 1232 aa9.61□□□□□ -0.87
TOP3B-208ENST00000437929 SKIV2LQ15477 1246 aaKnown RBP9.61□□□□□ -0.87
TOP3B-208ENST00000437929 MYSM1Q5VVJ2 828 aa9.61□□□□□ -0.87
TOP3B-208ENST00000437929 ADGRD1Q6QNK2 874 aa9.61□□□□□ -0.87
TOP3B-208ENST00000437929 MRPL50Q8N5N7 158 aaKnown RBP9.61□□□□□ -0.87
TOP3B-208ENST00000437929 TMOD3Q9NYL9 352 aa9.61□□□□□ -0.87
TOP3B-208ENST00000437929 EMILIN1Q9Y6C2 1016 aa9.61□□□□□ -0.87
TOP3B-208ENST00000437929 KIF13BQ9NQT8 1826 aa9.61□□□□□ -0.87
TOP3B-208ENST00000437929 C10orf71Q711Q0 1435 aa9.6□□□□□ -0.87
TOP3B-208ENST00000437929 DPEP1P16444 411 aa9.6□□□□□ -0.87
TOP3B-208ENST00000437929 DIXDC1Q155Q3 683 aa9.6□□□□□ -0.87
TOP3B-208ENST00000437929 ERICH6Q7L0X2 663 aa9.6□□□□□ -0.87
TOP3B-208ENST00000437929 SAMD7Q7Z3H4 446 aa9.6□□□□□ -0.87
TOP3B-208ENST00000437929 LAPTM4BQ86VI4 370 aa9.6□□□□□ -0.87
TOP3B-208ENST00000437929 C16orf71Q8IYS4 520 aaPredicted RBP9.6□□□□□ -0.87
TOP3B-208ENST00000437929 KLRG1Q96E93 195 aa9.6□□□□□ -0.87
TOP3B-208ENST00000437929 KIF20BQ96Q89 1820 aa9.6□□□□□ -0.87
TOP3B-208ENST00000437929 KCPQ6ZWJ8 1503 aa9.6□□□□□ -0.87
TOP3B-208ENST00000437929 PPM1GO15355 546 aaPredicted RBP9.59□□□□□ -0.87
TOP3B-208ENST00000437929 TGFB2P61812 414 aa9.59□□□□□ -0.87
TOP3B-208ENST00000437929 C9orf131Q5VYM1 1079 aa9.59□□□□□ -0.87
TOP3B-208ENST00000437929 PROCA1Q8NCQ7 364 aaPredicted RBP9.59□□□□□ -0.87
TOP3B-208ENST00000437929 SPIRE2Q8WWL2 714 aa9.59□□□□□ -0.87
TOP3B-208ENST00000437929 CLK2P49760 499 aaKnown RBP9.58□□□□□ -0.88
TOP3B-208ENST00000437929 TMF1P82094 1093 aa9.58□□□□□ -0.88
TOP3B-208ENST00000437929 TRAPPC3LQ5T215 181 aa9.58□□□□□ -0.88
TOP3B-208ENST00000437929 TNS4Q8IZW8 715 aa9.58□□□□□ -0.88
TOP3B-208ENST00000437929 ATG3Q9NT62 314 aa9.58□□□□□ -0.88
TOP3B-208ENST00000437929 SPG7Q9UQ90 795 aa9.58□□□□□ -0.88
TOP3B-208ENST00000437929 RTCBQ9Y3I0 505 aaKnown RBP9.58□□□□□ -0.88
TOP3B-208ENST00000437929 C4AP0C0L4 1744 aa9.58□□□□□ -0.88
TOP3B-208ENST00000437929 TONSLQ96HA7 1378 aa9.58□□□□□ -0.88
TOP3B-208ENST00000437929 BRCA1P38398 1863 aaKnown RBP9.57□□□□□ -0.88
TOP3B-208ENST00000437929 GOLGA8CPA6NN73 597 aa9.57□□□□□ -0.88
TOP3B-208ENST00000437929 BHMG1C9JSJ3 638 aaPredicted RBP9.57□□□□□ -0.88
TOP3B-208ENST00000437929 SLF2Q8IX21 1173 aa9.57□□□□□ -0.88
TOP3B-208ENST00000437929 JMYQ8N9B5 988 aa9.57□□□□□ -0.88
TOP3B-208ENST00000437929 ZFRQ96KR1 1074 aaKnown RBP9.57□□□□□ -0.88
TOP3B-208ENST00000437929 SLC4A9Q96Q91 983 aa9.57□□□□□ -0.88
TOP3B-208ENST00000437929 RRAGCQ9HB90 399 aa9.57□□□□□ -0.88
TOP3B-208ENST00000437929 CCDC87Q9NVE4 849 aa9.57□□□□□ -0.88
TOP3B-208ENST00000437929 KDRP35968 1356 aa9.56□□□□□ -0.88
TOP3B-208ENST00000437929 SLC10A3P09131 477 aa9.56□□□□□ -0.88
TOP3B-208ENST00000437929 GYS1P13807 737 aa9.56□□□□□ -0.88
TOP3B-208ENST00000437929 PHKG2P15735 406 aa9.56□□□□□ -0.88
TOP3B-208ENST00000437929 KCNA3P22001 575 aa9.56□□□□□ -0.88
TOP3B-208ENST00000437929 CSPP1Q1MSJ5 1256 aa9.56□□□□□ -0.88
TOP3B-208ENST00000437929 IFNL2Q8IZJ0 200 aa9.56□□□□□ -0.88
TOP3B-208ENST00000437929 NLGN1Q8N2Q7 840 aa9.56□□□□□ -0.88
TOP3B-208ENST00000437929 RNF181Q9P0P0 153 aa9.56□□□□□ -0.88
TOP3B-208ENST00000437929 PARP3Q9Y6F1 533 aa9.56□□□□□ -0.88
TOP3B-208ENST00000437929 NCAPD2Q15021 1401 aa9.56□□□□□ -0.88
TOP3B-208ENST00000437929 KIF24Q5T7B8 1368 aa9.55□□□□□ -0.88
TOP3B-208ENST00000437929 PLEKHG2Q9H7P9 1386 aa9.55□□□□□ -0.88
TOP3B-208ENST00000437929 KDM4AO75164 1064 aa9.55□□□□□ -0.88
TOP3B-208ENST00000437929 RFC4P35249 363 aa9.55□□□□□ -0.88
TOP3B-208ENST00000437929 FSTL1Q12841 308 aa9.55□□□□□ -0.88
TOP3B-208ENST00000437929 RIC3Q7Z5B4 369 aa9.55□□□□□ -0.88
TOP3B-208ENST00000437929 COL5A3P25940 1745 aaPredicted RBP9.55□□□□□ -0.88
TOP3B-208ENST00000437929 KDM2BQ8NHM5 1336 aa9.55□□□□□ -0.88
TOP3B-208ENST00000437929 ARFGEF1Q9Y6D6 1849 aa9.54□□□□□ -0.88
TOP3B-208ENST00000437929 MOXD2PA6NHM9 499 aa9.54□□□□□ -0.88
TOP3B-208ENST00000437929 CHRNA5P30532 468 aa9.54□□□□□ -0.88
TOP3B-208ENST00000437929 GCGRP47871 477 aa9.54□□□□□ -0.88
TOP3B-208ENST00000437929 PRELPP51888 382 aa9.54□□□□□ -0.88
TOP3B-208ENST00000437929 LRCH3Q96II8 777 aa9.54□□□□□ -0.88
TOP3B-208ENST00000437929 PIM2Q9P1W9 311 aa9.54□□□□□ -0.88
TOP3B-208ENST00000437929 LIMD1Q9UGP4 676 aa9.54□□□□□ -0.88
TOP3B-208ENST00000437929 SRP68Q9UHB9 627 aaKnown RBP9.54□□□□□ -0.88
TOP3B-208ENST00000437929 TNRC6CQ9HCJ0 1690 aaKnown RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms