RNA–Protein interactions for RNA: ENST00000437654.5

IRF1-203, Transcript of interferon regulatory factor 1, humanhuman

TSL 3

Gene IRF1, Length 832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-203ENST00000437654 BEND3Q5T5X7 828 aa23.08■■□□□ 1.29
IRF1-203ENST00000437654 TRMT112Q9UI30 125 aaKnown RBP23.08■■□□□ 1.29
IRF1-203ENST00000437654 ARFGEF2Q9Y6D5 1785 aa23.07■■□□□ 1.28
IRF1-203ENST00000437654 NEURL1BA8MQ27 555 aa23.07■■□□□ 1.28
IRF1-203ENST00000437654 F6X3S4 739 aa23.07■■□□□ 1.28
IRF1-203ENST00000437654 PDE6BP35913 854 aa23.07■■□□□ 1.28
IRF1-203ENST00000437654 ZKSCAN2Q63HK3 967 aa23.07■■□□□ 1.28
IRF1-203ENST00000437654 ZBTB38Q8NAP3 1195 aaPredicted RBP23.07■■□□□ 1.28
IRF1-203ENST00000437654 C10orf71Q711Q0 1435 aa23.07■■□□□ 1.28
IRF1-203ENST00000437654 SH3TC1Q8TE82 1336 aa23.07■■□□□ 1.28
IRF1-203ENST00000437654 ATF7IPQ6VMQ6 1270 aa23.06■■□□□ 1.28
IRF1-203ENST00000437654 SYT17Q9BSW7 474 aa23.06■■□□□ 1.28
IRF1-203ENST00000437654 FHDC1Q9C0D6 1143 aaPredicted RBP23.06■■□□□ 1.28
IRF1-203ENST00000437654 SRCIN1Q9C0H9 1055 aa23.06■■□□□ 1.28
IRF1-203ENST00000437654 ANKRD36CQ5JPF3 1778 aa23.05■■□□□ 1.28
IRF1-203ENST00000437654 PCCAP05165 728 aaPredicted RBP23.05■■□□□ 1.28
IRF1-203ENST00000437654 CCT4P50991 539 aaKnown RBP23.05■■□□□ 1.28
IRF1-203ENST00000437654 SLC4A10Q6U841 1118 aa23.05■■□□□ 1.28
IRF1-203ENST00000437654 KLRG2A4D1S0 409 aaPredicted RBP23.04■■□□□ 1.28
IRF1-203ENST00000437654 FAM177BA6PVY3 158 aa23.04■■□□□ 1.28
IRF1-203ENST00000437654 MS4A1P11836 297 aa23.04■■□□□ 1.28
IRF1-203ENST00000437654 GCKRQ14397 625 aa23.04■■□□□ 1.28
IRF1-203ENST00000437654 FRAT1Q92837 279 aaPredicted RBP23.04■■□□□ 1.28
IRF1-203ENST00000437654 RIC1Q4ADV7 1423 aa23.04■■□□□ 1.28
IRF1-203ENST00000437654 PXDNLA1KZ92 1463 aa23.04■■□□□ 1.28
IRF1-203ENST00000437654 CWF19L2Q2TBE0 894 aaKnown RBP23.03■■□□□ 1.28
IRF1-203ENST00000437654 ERFEQ4G0M1 354 aa23.03■■□□□ 1.28
IRF1-203ENST00000437654 H7C1W4 665 aa23.02■■□□□ 1.28
IRF1-203ENST00000437654 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.02■■□□□ 1.28
IRF1-203ENST00000437654 AFDNP55196 1824 aaKnown RBP23.01■■□□□ 1.27
IRF1-203ENST00000437654 TRIM27P14373 513 aa23.01■■□□□ 1.27
IRF1-203ENST00000437654 NUTM1Q86Y26 1132 aa23.01■■□□□ 1.27
IRF1-203ENST00000437654 NLRP3Q96P20 1036 aa23.01■■□□□ 1.27
IRF1-203ENST00000437654 CDHR2Q9BYE9 1310 aa23.01■■□□□ 1.27
IRF1-203ENST00000437654 H0YIN7 160 aa23■■□□□ 1.27
IRF1-203ENST00000437654 INTS3Q68E01 1043 aaKnown RBP23■■□□□ 1.27
IRF1-203ENST00000437654 FAM89AQ96GI7 184 aa23■■□□□ 1.27
IRF1-203ENST00000437654 KIF13BQ9NQT8 1826 aa23■■□□□ 1.27
IRF1-203ENST00000437654 ABCC4O15439 1325 aa23■■□□□ 1.27
IRF1-203ENST00000437654 KLHL34Q8N239 644 aa22.99■■□□□ 1.27
IRF1-203ENST00000437654 GRM8O00222 908 aa22.98■■□□□ 1.27
IRF1-203ENST00000437654 IRS4O14654 1257 aaPredicted RBP22.98■■□□□ 1.27
IRF1-203ENST00000437654 CRY2Q49AN0 593 aa22.98■■□□□ 1.27
IRF1-203ENST00000437654 C9orf78Q9NZ63 289 aaPredicted RBP22.98■■□□□ 1.27
IRF1-203ENST00000437654 HDAC5Q9UQL6 1122 aa22.98■■□□□ 1.27
IRF1-203ENST00000437654 DZIP1LQ8IYY4 767 aaKnown RBP22.97■■□□□ 1.27
IRF1-203ENST00000437654 PLA2G12BQ9BX93 195 aa22.97■■□□□ 1.27
IRF1-203ENST00000437654 UTYO14607 1347 aa22.97■■□□□ 1.27
IRF1-203ENST00000437654 PDE8AO60658 829 aa22.96■■□□□ 1.27
IRF1-203ENST00000437654 SRGNP10124 158 aa22.96■■□□□ 1.27
IRF1-203ENST00000437654 SF3B3Q15393 1217 aaKnown RBP22.96■■□□□ 1.27
IRF1-203ENST00000437654 STYK1Q6J9G0 422 aa22.96■■□□□ 1.27
IRF1-203ENST00000437654 C2CD5Q86YS7 1000 aa22.96■■□□□ 1.27
IRF1-203ENST00000437654 CCDC24Q8N4L8 307 aa22.96■■□□□ 1.27
IRF1-203ENST00000437654 MASTLQ96GX5 879 aa22.96■■□□□ 1.27
IRF1-203ENST00000437654 NPR1P16066 1061 aa22.95■■□□□ 1.26
IRF1-203ENST00000437654 DPEP1P16444 411 aa22.95■■□□□ 1.26
IRF1-203ENST00000437654 CASP7P55210 303 aa22.95■■□□□ 1.26
IRF1-203ENST00000437654 FTSJ3Q8IY81 847 aaKnown RBP22.95■■□□□ 1.26
IRF1-203ENST00000437654 ABCC12Q96J65 1359 aa22.95■■□□□ 1.26
IRF1-203ENST00000437654 PIM2Q9P1W9 311 aa22.95■■□□□ 1.26
IRF1-203ENST00000437654 A0A0G2JLW4 131 aa22.94■■□□□ 1.26
IRF1-203ENST00000437654 KCNA3P22001 575 aa22.94■■□□□ 1.26
IRF1-203ENST00000437654 ALDH1B1P30837 517 aa22.94■■□□□ 1.26
IRF1-203ENST00000437654 HOXA10P31260 410 aaPredicted RBP22.94■■□□□ 1.26
IRF1-203ENST00000437654 PDE3AQ14432 1141 aa22.94■■□□□ 1.26
IRF1-203ENST00000437654 UBE3BQ7Z3V4 1068 aa22.94■■□□□ 1.26
IRF1-203ENST00000437654 SYNE4Q8N205 404 aa22.94■■□□□ 1.26
IRF1-203ENST00000437654 NLGN2Q8NFZ4 835 aa22.94■■□□□ 1.26
IRF1-203ENST00000437654 HCLS1P14317 486 aaPredicted RBP22.93■■□□□ 1.26
IRF1-203ENST00000437654 CNKSR1Q969H4 720 aa22.93■■□□□ 1.26
IRF1-203ENST00000437654 USP44Q9H0E7 712 aa22.93■■□□□ 1.26
IRF1-203ENST00000437654 RTL5Q5HYW3 569 aaPredicted RBP22.92■■□□□ 1.26
IRF1-203ENST00000437654 RPGRQ92834 1020 aaKnown RBP22.92■■□□□ 1.26
IRF1-203ENST00000437654 CLUAP1Q96AJ1 413 aa22.92■■□□□ 1.26
IRF1-203ENST00000437654 RBM17Q96I25 401 aaKnown RBP22.92■■□□□ 1.26
IRF1-203ENST00000437654 CRAMP1Q96RY5 1269 aa22.92■■□□□ 1.26
IRF1-203ENST00000437654 CHRNA5P30532 468 aa22.91■■□□□ 1.26
IRF1-203ENST00000437654 GNAI3P08754 354 aa22.9■■□□□ 1.26
IRF1-203ENST00000437654 TTLL6Q8N841 843 aa22.9■■□□□ 1.26
IRF1-203ENST00000437654 CSF1RP07333 972 aa22.89■■□□□ 1.25
IRF1-203ENST00000437654 NBPF7P0C2Y1 421 aaPredicted RBP22.89■■□□□ 1.25
IRF1-203ENST00000437654 CCDC152Q4G0S7 254 aa22.89■■□□□ 1.25
IRF1-203ENST00000437654 DALRD3Q5D0E6 543 aaKnown RBP22.89■■□□□ 1.25
IRF1-203ENST00000437654 TMEM57Q8N5G2 664 aa22.89■■□□□ 1.25
IRF1-203ENST00000437654 ZNF622Q969S3 477 aaKnown RBP eCLIP22.89■■□□□ 1.257e-6■■□□□ 12.8
IRF1-203ENST00000437654 CHMP4BQ9H444 224 aaKnown RBP22.89■■□□□ 1.25
IRF1-203ENST00000437654 ANKRD31Q8N7Z5 1873 aa22.89■■□□□ 1.25
IRF1-203ENST00000437654 CTSWP56202 376 aa22.88■■□□□ 1.25
IRF1-203ENST00000437654 DDX46Q7L014 1031 aaKnown RBP22.88■■□□□ 1.25
IRF1-203ENST00000437654 TTLL11Q8NHH1 800 aa22.88■■□□□ 1.25
IRF1-203ENST00000437654 JARID2Q92833 1246 aaPredicted RBP22.88■■□□□ 1.25
IRF1-203ENST00000437654 DCAF8L1A6NGE4 600 aa22.87■■□□□ 1.25
IRF1-203ENST00000437654 BBOX1O75936 387 aa22.87■■□□□ 1.25
IRF1-203ENST00000437654 C3orf67Q6ZVT6 689 aa22.87■■□□□ 1.25
IRF1-203ENST00000437654 TNNQ9UQP3 1299 aa22.87■■□□□ 1.25
IRF1-203ENST00000437654 UBTFL1P0CB47 393 aaPredicted RBP22.86■■□□□ 1.25
IRF1-203ENST00000437654 FOXO4P98177 505 aa22.86■■□□□ 1.25
IRF1-203ENST00000437654 RTL9Q8NET4 1388 aa22.86■■□□□ 1.25
IRF1-203ENST00000437654 N4BP2Q86UW6 1770 aaPredicted RBP22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms