RNA–Protein interactions for RNA: ENST00000437034.6

CAST-209, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 3,377 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-209ENST00000437034 GABPB2Q8TAK5 448 aaPredicted RBP6.31□□□□□ -1.4
CAST-209ENST00000437034 TSC1Q92574 1164 aa6.31□□□□□ -1.4
CAST-209ENST00000437034 JARID2Q92833 1246 aaPredicted RBP6.31□□□□□ -1.4
CAST-209ENST00000437034 ASAP1Q9ULH1 1129 aa6.31□□□□□ -1.4
CAST-209ENST00000437034 ANKRD18BA2A2Z9 1011 aa6.31□□□□□ -1.4
CAST-209ENST00000437034 GRXCR2A6NFK2 248 aa6.31□□□□□ -1.4
CAST-209ENST00000437034 GUCY2CP25092 1073 aa6.31□□□□□ -1.4
CAST-209ENST00000437034 SMARCA1P28370 1054 aa6.31□□□□□ -1.4
CAST-209ENST00000437034 COBLL1Q53SF7 1204 aa6.31□□□□□ -1.4
CAST-209ENST00000437034 OTUD6AQ7L8S5 288 aa6.31□□□□□ -1.4
CAST-209ENST00000437034 GPIHBP1Q8IV16 184 aa6.31□□□□□ -1.4
CAST-209ENST00000437034 PLPP6Q8IY26 295 aa6.31□□□□□ -1.4
CAST-209ENST00000437034 MYO1BO43795 1136 aa6.31□□□□□ -1.4
CAST-209ENST00000437034 NPAS4Q8IUM7 802 aa6.31□□□□□ -1.4
CAST-209ENST00000437034 GOLGA1Q92805 767 aa6.31□□□□□ -1.4
CAST-209ENST00000437034 GBP4Q96PP9 640 aa6.31□□□□□ -1.4
CAST-209ENST00000437034 SLC7A5P2Q9GIP4 190 aa6.31□□□□□ -1.4
CAST-209ENST00000437034 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.31□□□□□ -1.4
CAST-209ENST00000437034 RSPH14Q9UHP6 348 aa6.31□□□□□ -1.4
CAST-209ENST00000437034 GOLGA3Q08378 1498 aa6.3□□□□□ -1.4
CAST-209ENST00000437034 TBC1D12O60347 775 aa6.3□□□□□ -1.4
CAST-209ENST00000437034 FCHSD2O94868 740 aa6.3□□□□□ -1.4
CAST-209ENST00000437034 DNAJA1P31689 397 aaKnown RBP6.3□□□□□ -1.4
CAST-209ENST00000437034 ZFPM2Q8WW38 1151 aa6.3□□□□□ -1.4
CAST-209ENST00000437034 BHMTQ93088 406 aa6.3□□□□□ -1.4
CAST-209ENST00000437034 SYAP1Q96A49 352 aaPredicted RBP6.3□□□□□ -1.4
CAST-209ENST00000437034 AGAP3Q96P47 875 aa6.3□□□□□ -1.4
CAST-209ENST00000437034 TEX13AQ9BXU3 409 aaPredicted RBP6.3□□□□□ -1.4
CAST-209ENST00000437034 NACA2Q9H009 215 aa6.3□□□□□ -1.4
CAST-209ENST00000437034 CCDC196A0A1B0GTZ2 297 aa6.3□□□□□ -1.4
CAST-209ENST00000437034 KRT38O76015 456 aa6.3□□□□□ -1.4
CAST-209ENST00000437034 SRPK2P78362 688 aaKnown RBP6.3□□□□□ -1.4
CAST-209ENST00000437034 CBX1P83916 185 aa6.3□□□□□ -1.4
CAST-209ENST00000437034 NELL1Q92832 810 aa6.3□□□□□ -1.4
CAST-209ENST00000437034 SMARCC1Q92922 1105 aaPredicted RBP6.3□□□□□ -1.4
CAST-209ENST00000437034 SLX1AQ9BQ83 275 aa6.3□□□□□ -1.4
CAST-209ENST00000437034 TMX1Q9H3N1 280 aa6.3□□□□□ -1.4
CAST-209ENST00000437034 UBAP1Q9NZ09 502 aa6.3□□□□□ -1.4
CAST-209ENST00000437034 CALCOCO1Q9P1Z2 691 aa6.3□□□□□ -1.4
CAST-209ENST00000437034 RRP15Q9Y3B9 282 aaKnown RBP6.3□□□□□ -1.4
CAST-209ENST00000437034 PCDHGA4Q9Y5G9 962 aa6.3□□□□□ -1.4
CAST-209ENST00000437034 TNIKQ9UKE5 1360 aa6.29□□□□□ -1.4
CAST-209ENST00000437034 TRIM37O94972 964 aa6.29□□□□□ -1.4
CAST-209ENST00000437034 MMEP08473 750 aa6.29□□□□□ -1.4
CAST-209ENST00000437034 OAS2P29728 719 aaKnown RBP6.29□□□□□ -1.4
CAST-209ENST00000437034 TRAPPC10P48553 1259 aa6.29□□□□□ -1.4
CAST-209ENST00000437034 BIRC3Q13489 604 aa6.29□□□□□ -1.4
CAST-209ENST00000437034 MAPRE1Q15691 268 aaKnown RBP6.29□□□□□ -1.4
CAST-209ENST00000437034 ANKRD45Q5TZF3 282 aa6.29□□□□□ -1.4
CAST-209ENST00000437034 FAAH2Q6GMR7 532 aa6.29□□□□□ -1.4
CAST-209ENST00000437034 PCMTD1Q96MG8 357 aaPredicted RBP6.29□□□□□ -1.4
CAST-209ENST00000437034 IER2Q9BTL4 223 aa6.29□□□□□ -1.4
CAST-209ENST00000437034 CHMP5Q9NZZ3 219 aa6.29□□□□□ -1.4
CAST-209ENST00000437034 GRIN2BQ13224 1484 aa6.29□□□□□ -1.4
CAST-209ENST00000437034 IQGAP2Q13576 1575 aa6.29□□□□□ -1.4
CAST-209ENST00000437034 HSPA5P11021 654 aaKnown RBP6.29□□□□□ -1.4
CAST-209ENST00000437034 PRIM1P49642 420 aaKnown RBP6.29□□□□□ -1.4
CAST-209ENST00000437034 TAF11Q15544 211 aa6.29□□□□□ -1.4
CAST-209ENST00000437034 FKBP15Q5T1M5 1219 aa6.29□□□□□ -1.4
CAST-209ENST00000437034 ZNF449Q6P9G9 518 aa6.29□□□□□ -1.4
CAST-209ENST00000437034 SVIPQ8NHG7 77 aa6.29□□□□□ -1.4
CAST-209ENST00000437034 TMEM87BQ96K49 555 aa6.29□□□□□ -1.4
CAST-209ENST00000437034 UIMC1Q96RL1 719 aa6.29□□□□□ -1.4
CAST-209ENST00000437034 DNAI2Q9GZS0 605 aa6.29□□□□□ -1.4
CAST-209ENST00000437034 UNC45AQ9H3U1 944 aa6.29□□□□□ -1.4
CAST-209ENST00000437034 ETAA1Q9NY74 926 aa6.29□□□□□ -1.4
CAST-209ENST00000437034 C6orf203Q9P0P8 240 aaPredicted RBP6.29□□□□□ -1.4
CAST-209ENST00000437034 POLG2Q9UHN1 485 aa6.29□□□□□ -1.4
CAST-209ENST00000437034 KIAA0556O60303 1618 aa6.29□□□□□ -1.4
CAST-209ENST00000437034 SMTNL1A8MU46 457 aa6.29□□□□□ -1.4
CAST-209ENST00000437034 H0Y3Z8 333 aa6.29□□□□□ -1.4
CAST-209ENST00000437034 FGAP02671 866 aa6.29□□□□□ -1.4
CAST-209ENST00000437034 ATP2B1P20020 1258 aa6.29□□□□□ -1.4
CAST-209ENST00000437034 CCDC91Q7Z6B0 441 aa6.29□□□□□ -1.4
CAST-209ENST00000437034 KRT77Q7Z794 578 aa6.29□□□□□ -1.4
CAST-209ENST00000437034 YIPF2Q9BWQ6 316 aa6.29□□□□□ -1.4
CAST-209ENST00000437034 CASS4Q9NQ75 786 aa6.29□□□□□ -1.4
CAST-209ENST00000437034 KDM5BQ9UGL1 1544 aa6.29□□□□□ -1.4
CAST-209ENST00000437034 hCG_1984214I3L0E3 225 aa6.28□□□□□ -1.4
CAST-209ENST00000437034 TULP2O00295 520 aa6.28□□□□□ -1.4
CAST-209ENST00000437034 RIPK4P57078 832 aa6.28□□□□□ -1.4
CAST-209ENST00000437034 SNX16P57768 344 aa6.28□□□□□ -1.4
CAST-209ENST00000437034 GPSM2P81274 684 aa6.28□□□□□ -1.4
CAST-209ENST00000437034 AKNAD1Q5T1N1 836 aa6.28□□□□□ -1.4
CAST-209ENST00000437034 WWC2Q6AWC2 1192 aa6.28□□□□□ -1.4
CAST-209ENST00000437034 PICK1Q9NRD5 415 aa6.28□□□□□ -1.4
CAST-209ENST00000437034 CWC15Q9P013 229 aaKnown RBP6.28□□□□□ -1.4
CAST-209ENST00000437034 SEL1LQ9UBV2 794 aa6.28□□□□□ -1.4
CAST-209ENST00000437034 KIF27Q86VH2 1401 aa6.28□□□□□ -1.4
CAST-209ENST00000437034 BCORL1Q5H9F3 1711 aa6.28□□□□□ -1.4
CAST-209ENST00000437034 LINC00854A0A1B0GVQ3 168 aa6.28□□□□□ -1.4
CAST-209ENST00000437034 HSP90AB1P08238 724 aaKnown RBP6.28□□□□□ -1.4
CAST-209ENST00000437034 TRDNQ13061 729 aa6.28□□□□□ -1.4
CAST-209ENST00000437034 Q3C1V9 767 aa6.28□□□□□ -1.4
CAST-209ENST00000437034 MAP3K14Q99558 947 aa6.28□□□□□ -1.4
CAST-209ENST00000437034 GDPD2Q9HCC8 539 aa6.28□□□□□ -1.4
CAST-209ENST00000437034 AVENQ9NQS1 362 aaPredicted RBP6.28□□□□□ -1.4
CAST-209ENST00000437034 CFAP65Q6ZU64 1925 aaKnown RBP6.28□□□□□ -1.4
CAST-209ENST00000437034 FIBPO43427 364 aa6.27□□□□□ -1.4
CAST-209ENST00000437034 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.27□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms