RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 ANAPC15P60006 121 aa18.32■□□□□ 0.52
PTPN13-204ENST00000436978 ZCRB1Q8TBF4 217 aaKnown RBP18.32■□□□□ 0.52
PTPN13-204ENST00000436978 PLXNC1O60486 1568 aa18.32■□□□□ 0.52
PTPN13-204ENST00000436978 PRAG1Q86YV5 1406 aa18.32■□□□□ 0.52
PTPN13-204ENST00000436978 UBA5Q9GZZ9 404 aa18.32■□□□□ 0.52
PTPN13-204ENST00000436978 CNNM2Q9H8M5 875 aa18.32■□□□□ 0.52
PTPN13-204ENST00000436978 SETDB2Q96T68 719 aa18.32■□□□□ 0.52
PTPN13-204ENST00000436978 TSPY2A6NKD2 308 aa18.32■□□□□ 0.52
PTPN13-204ENST00000436978 TOM1O60784 492 aa18.32■□□□□ 0.52
PTPN13-204ENST00000436978 BMP2KLQ5H9B9 411 aa18.32■□□□□ 0.52
PTPN13-204ENST00000436978 ARHGAP45Q92619 1136 aa18.32■□□□□ 0.52
PTPN13-204ENST00000436978 NUP153P49790 1475 aaKnown RBP18.32■□□□□ 0.52
PTPN13-204ENST00000436978 TSPOAP1O95153 1857 aa18.31■□□□□ 0.52
PTPN13-204ENST00000436978 METAP2P50579 478 aaKnown RBP eCLIP18.31■□□□□ 0.52
PTPN13-204ENST00000436978 TOP1P11387 765 aaKnown RBP18.31■□□□□ 0.52
PTPN13-204ENST00000436978 ANKRD13DQ6ZTN6 518 aa18.31■□□□□ 0.52
PTPN13-204ENST00000436978 STX1AQ16623 288 aa18.31■□□□□ 0.52
PTPN13-204ENST00000436978 DDX19AQ9NUU7 478 aaKnown RBP18.31■□□□□ 0.52
PTPN13-204ENST00000436978 USO1O60763 962 aaKnown RBP18.3■□□□□ 0.52
PTPN13-204ENST00000436978 MCM5P33992 734 aa18.3■□□□□ 0.52
PTPN13-204ENST00000436978 CCDC184Q52MB2 194 aa18.3■□□□□ 0.52
PTPN13-204ENST00000436978 TAX1BP1Q86VP1 789 aa18.3■□□□□ 0.52
PTPN13-204ENST00000436978 FILIP1Q7Z7B0 1213 aa18.3■□□□□ 0.52
PTPN13-204ENST00000436978 TMTC2Q8N394 836 aa18.3■□□□□ 0.52
PTPN13-204ENST00000436978 NUP88Q99567 741 aaPredicted RBP18.3■□□□□ 0.52
PTPN13-204ENST00000436978 KLHL10Q6JEL2 608 aa18.29■□□□□ 0.52
PTPN13-204ENST00000436978 IARSP41252 1262 aaKnown RBP18.29■□□□□ 0.52
PTPN13-204ENST00000436978 ZNF804AQ7Z570 1209 aa18.29■□□□□ 0.52
PTPN13-204ENST00000436978 ATP6V1AP38606 617 aa18.29■□□□□ 0.52
PTPN13-204ENST00000436978 HDAC9Q9UKV0 1011 aa18.29■□□□□ 0.52
PTPN13-204ENST00000436978 AKAP4Q5JQC9 854 aa18.29■□□□□ 0.52
PTPN13-204ENST00000436978 TCOF1Q13428 1488 aaKnown RBP18.29■□□□□ 0.52
PTPN13-204ENST00000436978 YEATS4O95619 227 aa18.29■□□□□ 0.52
PTPN13-204ENST00000436978 ZSCAN16Q9H4T2 348 aaPredicted RBP18.29■□□□□ 0.52
PTPN13-204ENST00000436978 CAVIN2O95810 425 aa18.29■□□□□ 0.52
PTPN13-204ENST00000436978 PI4KAP2A4QPH2 592 aa18.29■□□□□ 0.52
PTPN13-204ENST00000436978 TTC22Q5TAA0 569 aa18.29■□□□□ 0.52
PTPN13-204ENST00000436978 PI4KAP1Q8N8J0 262 aa18.29■□□□□ 0.52
PTPN13-204ENST00000436978 ZNF622Q969S3 477 aaKnown RBP eCLIP18.29■□□□□ 0.52
PTPN13-204ENST00000436978 NEMFO60524 1076 aa18.28■□□□□ 0.52
PTPN13-204ENST00000436978 FERMT2Q96AC1 680 aa18.28■□□□□ 0.52
PTPN13-204ENST00000436978 BMP15O95972 392 aa18.28■□□□□ 0.52
PTPN13-204ENST00000436978 WDR78Q5VTH9 848 aa18.28■□□□□ 0.52
PTPN13-204ENST00000436978 ERMNQ8TAM6 284 aa18.28■□□□□ 0.52
PTPN13-204ENST00000436978 GSDMDP57764 484 aa18.28■□□□□ 0.52
PTPN13-204ENST00000436978 NEK1Q96PY6 1258 aa18.28■□□□□ 0.52
PTPN13-204ENST00000436978 RMND1Q9NWS8 449 aa18.27■□□□□ 0.52
PTPN13-204ENST00000436978 ABCC2Q92887 1545 aa18.27■□□□□ 0.52
PTPN13-204ENST00000436978 FLT4P35916 1363 aa18.27■□□□□ 0.52
PTPN13-204ENST00000436978 TSPY3P0CV98 308 aa18.27■□□□□ 0.52
PTPN13-204ENST00000436978 TSPY8P0CW00 308 aa18.27■□□□□ 0.52
PTPN13-204ENST00000436978 ALS2CR12Q96Q35 445 aa18.27■□□□□ 0.52
PTPN13-204ENST00000436978 GJB2P29033 226 aa18.26■□□□□ 0.51
PTPN13-204ENST00000436978 FERMT3Q86UX7 667 aa18.26■□□□□ 0.51
PTPN13-204ENST00000436978 DRC1Q96MC2 740 aa18.26■□□□□ 0.51
PTPN13-204ENST00000436978 FAM193AP78312 1265 aa18.26■□□□□ 0.51
PTPN13-204ENST00000436978 CCT2P78371 535 aaKnown RBP18.26■□□□□ 0.51
PTPN13-204ENST00000436978 TAOK3Q9H2K8 898 aa18.26■□□□□ 0.51
PTPN13-204ENST00000436978 ATP7AQ04656 1500 aa18.26■□□□□ 0.51
PTPN13-204ENST00000436978 NPATQ14207 1427 aa18.26■□□□□ 0.51
PTPN13-204ENST00000436978 PTPN14Q15678 1187 aa18.26■□□□□ 0.51
PTPN13-204ENST00000436978 TMEM87AQ8NBN3 555 aa18.26■□□□□ 0.51
PTPN13-204ENST00000436978 CHPF2Q9P2E5 772 aa18.26■□□□□ 0.51
PTPN13-204ENST00000436978 UQCRHLA0A096LP55 91 aa18.26■□□□□ 0.51
PTPN13-204ENST00000436978 UQCRHP07919 91 aa18.26■□□□□ 0.51
PTPN13-204ENST00000436978 TBC1D9Q6ZT07 1266 aa18.26■□□□□ 0.51
PTPN13-204ENST00000436978 ATP5J2-PTCD1G3V325 749 aa18.26■□□□□ 0.51
PTPN13-204ENST00000436978 CALRP27797 417 aaKnown RBP18.26■□□□□ 0.51
PTPN13-204ENST00000436978 CRACR2AQ9BSW2 395 aa18.26■□□□□ 0.51
PTPN13-204ENST00000436978 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.25■□□□□ 0.51
PTPN13-204ENST00000436978 CCDC172P0C7W6 258 aa18.25■□□□□ 0.51
PTPN13-204ENST00000436978 FSIP1Q8NA03 581 aa18.25■□□□□ 0.51
PTPN13-204ENST00000436978 PAXIP1Q6ZW49 1069 aaPredicted RBP18.25■□□□□ 0.51
PTPN13-204ENST00000436978 KIF18AQ8NI77 898 aa18.25■□□□□ 0.51
PTPN13-204ENST00000436978 SOS1Q07889 1333 aaPredicted RBP18.25■□□□□ 0.51
PTPN13-204ENST00000436978 STX6O43752 255 aa18.25■□□□□ 0.51
PTPN13-204ENST00000436978 WTAPQ15007 396 aa18.25■□□□□ 0.51
PTPN13-204ENST00000436978 GNAT2P19087 354 aa18.25■□□□□ 0.51
PTPN13-204ENST00000436978 IFIT1BQ5T764 474 aaKnown RBP18.25■□□□□ 0.51
PTPN13-204ENST00000436978 UBXN4Q92575 508 aa18.25■□□□□ 0.51
PTPN13-204ENST00000436978 PRKCSHP14314 528 aaPredicted RBP18.25■□□□□ 0.51
PTPN13-204ENST00000436978 SYCP3Q8IZU3 236 aa18.25■□□□□ 0.51
PTPN13-204ENST00000436978 PDCL2Q8N4E4 241 aa18.25■□□□□ 0.51
PTPN13-204ENST00000436978 CLIP2Q9UDT6 1046 aa18.25■□□□□ 0.51
PTPN13-204ENST00000436978 USP16Q9Y5T5 823 aa18.25■□□□□ 0.51
PTPN13-204ENST00000436978 MAP3K5Q99683 1374 aa18.24■□□□□ 0.51
PTPN13-204ENST00000436978 GOLGA6L9A6NEM1 432 aa18.24■□□□□ 0.51
PTPN13-204ENST00000436978 CHMP4BP1P59074 171 aa18.24■□□□□ 0.51
PTPN13-204ENST00000436978 HDAC1Q13547 482 aaPredicted RBP18.24■□□□□ 0.51
PTPN13-204ENST00000436978 FERMT1Q9BQL6 677 aa18.24■□□□□ 0.51
PTPN13-204ENST00000436978 ALDH1L1O75891 902 aa18.24■□□□□ 0.51
PTPN13-204ENST00000436978 ESR2Q92731 530 aa18.24■□□□□ 0.51
PTPN13-204ENST00000436978 USP37Q86T82 979 aa18.24■□□□□ 0.51
PTPN13-204ENST00000436978 GCOM1H8Y6P7 765 aaPredicted RBP18.24■□□□□ 0.51
PTPN13-204ENST00000436978 GRM8O00222 908 aa18.24■□□□□ 0.51
PTPN13-204ENST00000436978 MYZAPP0CAP1 466 aa18.24■□□□□ 0.51
PTPN13-204ENST00000436978 GNAQP50148 359 aa18.24■□□□□ 0.51
PTPN13-204ENST00000436978 NUCB1Q02818 461 aa18.24■□□□□ 0.51
PTPN13-204ENST00000436978 PUS7Q96PZ0 661 aaKnown RBP18.24■□□□□ 0.51
PTPN13-204ENST00000436978 SAMM50Q9Y512 469 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms