RNA–Protein interactions for RNA: ENST00000436216.1

EXT1-202, Transcript of exostosin glycosyltransferase 1, humanhuman

TSL 3

Gene EXT1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1-202ENST00000436216 PRELPP51888 382 aa16.01■□□□□ 0.15
EXT1-202ENST00000436216 TRIM28Q13263 835 aaKnown RBP16.01■□□□□ 0.15
EXT1-202ENST00000436216 ISCA1Q9BUE6 129 aa16.01■□□□□ 0.15
EXT1-202ENST00000436216 UTP14AQ9BVJ6 771 aaKnown RBP16.01■□□□□ 0.15
EXT1-202ENST00000436216 PHAXQ9H814 394 aaKnown RBP16.01■□□□□ 0.15
EXT1-202ENST00000436216 TNRC6CQ9HCJ0 1690 aaKnown RBP16.01■□□□□ 0.15
EXT1-202ENST00000436216 FANCIQ9NVI1 1328 aa16■□□□□ 0.15
EXT1-202ENST00000436216 ALDH1B1P30837 517 aa16■□□□□ 0.15
EXT1-202ENST00000436216 FER1L6Q2WGJ9 1857 aa15.99■□□□□ 0.15
EXT1-202ENST00000436216 ZNF521Q96K83 1311 aa15.99■□□□□ 0.15
EXT1-202ENST00000436216 CCER2I3L3R5 266 aa15.99■□□□□ 0.15
EXT1-202ENST00000436216 LMNB1P20700 586 aa15.99■□□□□ 0.15
EXT1-202ENST00000436216 RASSF7Q02833 373 aa15.99■□□□□ 0.15
EXT1-202ENST00000436216 TWISTNBQ3B726 338 aaPredicted RBP15.99■□□□□ 0.15
EXT1-202ENST00000436216 SOGA3Q5TF21 947 aa15.99■□□□□ 0.15
EXT1-202ENST00000436216 GPBP1L1Q9HC44 474 aaPredicted RBP15.99■□□□□ 0.15
EXT1-202ENST00000436216 SPINK5Q9NQ38 1064 aaPredicted RBP15.99■□□□□ 0.15
EXT1-202ENST00000436216 RNF181Q9P0P0 153 aa15.99■□□□□ 0.15
EXT1-202ENST00000436216 LTBP3Q9NS15 1303 aa15.98■□□□□ 0.15
EXT1-202ENST00000436216 ZC3H4Q9UPT8 1303 aaKnown RBP15.97■□□□□ 0.15
EXT1-202ENST00000436216 GOLGA2Q08379 1002 aa15.97■□□□□ 0.15
EXT1-202ENST00000436216 C3orf67Q6ZVT6 689 aa15.97■□□□□ 0.15
EXT1-202ENST00000436216 SYNE4Q8N205 404 aa15.97■□□□□ 0.15
EXT1-202ENST00000436216 NLRP3Q96P20 1036 aa15.97■□□□□ 0.15
EXT1-202ENST00000436216 CRAMP1Q96RY5 1269 aa15.97■□□□□ 0.15
EXT1-202ENST00000436216 ZNF219Q9P2Y4 722 aaPredicted RBP15.97■□□□□ 0.15
EXT1-202ENST00000436216 TRMT112Q9UI30 125 aaKnown RBP15.97■□□□□ 0.15
EXT1-202ENST00000436216 SH3TC1Q8TE82 1336 aa15.96■□□□□ 0.15
EXT1-202ENST00000436216 ATP5J2-PTCD1G3V325 749 aa15.96■□□□□ 0.15
EXT1-202ENST00000436216 VAMP4O75379 141 aa15.96■□□□□ 0.15
EXT1-202ENST00000436216 RIC3Q7Z5B4 369 aa15.96■□□□□ 0.15
EXT1-202ENST00000436216 CACNA1SQ13698 1873 aa15.96■□□□□ 0.15
EXT1-202ENST00000436216 EXOSC9Q06265 439 aaKnown RBP15.95■□□□□ 0.14
EXT1-202ENST00000436216 CCDC93Q567U6 631 aa15.95■□□□□ 0.14
EXT1-202ENST00000436216 ZNF526Q8TF50 670 aaPredicted RBP15.95■□□□□ 0.14
EXT1-202ENST00000436216 RPGRQ92834 1020 aaKnown RBP15.95■□□□□ 0.14
EXT1-202ENST00000436216 STK31Q9BXU1 1019 aa15.95■□□□□ 0.14
EXT1-202ENST00000436216 TAOK3Q9H2K8 898 aa15.95■□□□□ 0.14
EXT1-202ENST00000436216 SNED1Q8TER0 1413 aa15.94■□□□□ 0.14
EXT1-202ENST00000436216 DDX58O95786 925 aaKnown RBP15.94■□□□□ 0.14
EXT1-202ENST00000436216 HCLS1P14317 486 aaPredicted RBP15.94■□□□□ 0.14
EXT1-202ENST00000436216 C1QTNF8P60827 252 aa15.94■□□□□ 0.14
EXT1-202ENST00000436216 KSR2Q6VAB6 950 aa15.94■□□□□ 0.14
EXT1-202ENST00000436216 RTKN2Q8IZC4 609 aa15.94■□□□□ 0.14
EXT1-202ENST00000436216 RBM17Q96I25 401 aaKnown RBP15.94■□□□□ 0.14
EXT1-202ENST00000436216 METTL22Q9BUU2 404 aaPredicted RBP15.94■□□□□ 0.14
EXT1-202ENST00000436216 MYH16Q9H6N6 1097 aa15.94■□□□□ 0.14
EXT1-202ENST00000436216 CCDC88AQ3V6T2 1871 aa15.94■□□□□ 0.14
EXT1-202ENST00000436216 KIF3CO14782 793 aa15.93■□□□□ 0.14
EXT1-202ENST00000436216 SLC4A2P04920 1241 aa15.93■□□□□ 0.14
EXT1-202ENST00000436216 CC2D2BQ6DHV5 1058 aa15.93■□□□□ 0.14
EXT1-202ENST00000436216 OLFM4Q6UX06 510 aa15.93■□□□□ 0.14
EXT1-202ENST00000436216 CCDC191Q8NCU4 936 aa15.93■□□□□ 0.14
EXT1-202ENST00000436216 FAM89AQ96GI7 184 aa15.93■□□□□ 0.14
EXT1-202ENST00000436216 DICER1Q9UPY3 1922 aaKnown RBP15.92■□□□□ 0.14
EXT1-202ENST00000436216 PI4KAP2A4QPH2 592 aa15.92■□□□□ 0.14
EXT1-202ENST00000436216 TCERG1O14776 1098 aaKnown RBP15.92■□□□□ 0.14
EXT1-202ENST00000436216 FKBP4Q02790 459 aaKnown RBP eCLIP15.92■□□□□ 0.14
EXT1-202ENST00000436216 GRIPAP1Q4V328 841 aa15.92■□□□□ 0.14
EXT1-202ENST00000436216 G2E3Q7L622 706 aa15.92■□□□□ 0.14
EXT1-202ENST00000436216 PI4KAP1Q8N8J0 262 aa15.92■□□□□ 0.14
EXT1-202ENST00000436216 MYD88Q99836 296 aa15.92■□□□□ 0.14
EXT1-202ENST00000436216 MAP3K2Q9Y2U5 619 aa15.92■□□□□ 0.14
EXT1-202ENST00000436216 LAMB2P55268 1798 aa15.92■□□□□ 0.14
EXT1-202ENST00000436216 CACNA1FO60840 1977 aa15.91■□□□□ 0.14
EXT1-202ENST00000436216 SF3B3Q15393 1217 aaKnown RBP15.91■□□□□ 0.14
EXT1-202ENST00000436216 ZBTB38Q8NAP3 1195 aaPredicted RBP15.91■□□□□ 0.14
EXT1-202ENST00000436216 KDM2BQ8NHM5 1336 aa15.91■□□□□ 0.14
EXT1-202ENST00000436216 DDX60Q8IY21 1712 aaKnown RBP15.91■□□□□ 0.14
EXT1-202ENST00000436216 GLTPD2A6NH11 291 aa15.9■□□□□ 0.14
EXT1-202ENST00000436216 BBOX1O75936 387 aa15.9■□□□□ 0.14
EXT1-202ENST00000436216 IGKV5-2P06315 115 aa15.9■□□□□ 0.14
EXT1-202ENST00000436216 ZNF428Q96B54 188 aa15.9■□□□□ 0.14
EXT1-202ENST00000436216 PSMD1Q99460 953 aa15.9■□□□□ 0.14
EXT1-202ENST00000436216 NMRK2Q9NPI5 230 aa15.9■□□□□ 0.14
EXT1-202ENST00000436216 ABCC4O15439 1325 aa15.9■□□□□ 0.14
EXT1-202ENST00000436216 PPEF1O14829 653 aaPredicted RBP15.89■□□□□ 0.13
EXT1-202ENST00000436216 PCCAP05165 728 aaPredicted RBP15.89■□□□□ 0.13
EXT1-202ENST00000436216 FLIIQ13045 1269 aa15.89■□□□□ 0.13
EXT1-202ENST00000436216 CWC25Q9NXE8 425 aaPredicted RBP15.89■□□□□ 0.13
EXT1-202ENST00000436216 ATP6V0A2Q9Y487 856 aa15.89■□□□□ 0.13
EXT1-202ENST00000436216 TIAM2Q8IVF5 1701 aa15.88■□□□□ 0.13
EXT1-202ENST00000436216 IRS4O14654 1257 aaPredicted RBP15.88■□□□□ 0.13
EXT1-202ENST00000436216 DIEXFQ68CQ4 756 aaKnown RBP15.88■□□□□ 0.13
EXT1-202ENST00000436216 DDX46Q7L014 1031 aaKnown RBP15.88■□□□□ 0.13
EXT1-202ENST00000436216 E9PSI1 815 aa15.87■□□□□ 0.13
EXT1-202ENST00000436216 HSP90B1P14625 803 aaKnown RBP15.87■□□□□ 0.13
EXT1-202ENST00000436216 SLFN5Q08AF3 891 aa15.87■□□□□ 0.13
EXT1-202ENST00000436216 GRAPQ13588 217 aa15.87■□□□□ 0.13
EXT1-202ENST00000436216 SLC51AQ86UW1 340 aa15.87■□□□□ 0.13
EXT1-202ENST00000436216 SP8Q8IXZ3 490 aa15.87■□□□□ 0.13
EXT1-202ENST00000436216 GRAPLQ8TC17 118 aaPredicted RBP15.87■□□□□ 0.13
EXT1-202ENST00000436216 ZNF277Q9NRM2 450 aaPredicted RBP15.87■□□□□ 0.13
EXT1-202ENST00000436216 NEURL1BA8MQ27 555 aa15.86■□□□□ 0.13
EXT1-202ENST00000436216 TOMM70O94826 608 aa15.86■□□□□ 0.13
EXT1-202ENST00000436216 NEXNQ0ZGT2 675 aa15.86■□□□□ 0.13
EXT1-202ENST00000436216 RTL5Q5HYW3 569 aaPredicted RBP15.86■□□□□ 0.13
EXT1-202ENST00000436216 DPY19L2Q6NUT2 758 aa15.86■□□□□ 0.13
EXT1-202ENST00000436216 TRMT2AQ8IZ69 625 aaKnown RBP15.86■□□□□ 0.13
EXT1-202ENST00000436216 RRAGCQ9HB90 399 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms