RNA–Protein interactions for RNA: ENST00000435643.1

AC007879.1-201, humanhuman

TSL 4 BASIC

Gene AC007879.1, Length 554 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007879.1-201ENST00000435643 KRT27Q7Z3Y8 459 aa10.71□□□□□ -0.69
AC007879.1-201ENST00000435643 THAP11Q96EK4 314 aa10.71□□□□□ -0.69
AC007879.1-201ENST00000435643 SHANK3Q9BYB0 1731 aa10.71□□□□□ -0.69
AC007879.1-201ENST00000435643 DAXXQ9UER7 740 aaPredicted RBP10.71□□□□□ -0.69
AC007879.1-201ENST00000435643 OVOS2A0A0G2JMS6 1433 aa10.7□□□□□ -0.7
AC007879.1-201ENST00000435643 FECHP22830 423 aa10.7□□□□□ -0.7
AC007879.1-201ENST00000435643 RPIAP49247 311 aa10.7□□□□□ -0.7
AC007879.1-201ENST00000435643 PDE3BQ13370 1112 aa10.7□□□□□ -0.7
AC007879.1-201ENST00000435643 FAM182BQ5T319 152 aa10.7□□□□□ -0.7
AC007879.1-201ENST00000435643 MARCH10Q8NA82 808 aaPredicted RBP10.7□□□□□ -0.7
AC007879.1-201ENST00000435643 ZCRB1Q8TBF4 217 aaKnown RBP10.7□□□□□ -0.7
AC007879.1-201ENST00000435643 PKD1L3Q7Z443 1732 aa10.7□□□□□ -0.7
AC007879.1-201ENST00000435643 RDH13Q8NBN7 331 aa10.69□□□□□ -0.7
AC007879.1-201ENST00000435643 RSPH6AQ9H0K4 717 aa10.69□□□□□ -0.7
AC007879.1-201ENST00000435643 AAASQ9NRG9 546 aa10.69□□□□□ -0.7
AC007879.1-201ENST00000435643 TNS2Q63HR2 1409 aa10.68□□□□□ -0.7
AC007879.1-201ENST00000435643 ST8SIA5O15466 376 aa10.68□□□□□ -0.7
AC007879.1-201ENST00000435643 PRKAR2BP31323 418 aa10.68□□□□□ -0.7
AC007879.1-201ENST00000435643 FUT2Q10981 343 aa10.68□□□□□ -0.7
AC007879.1-201ENST00000435643 PLEKHO1Q53GL0 409 aaPredicted RBP10.68□□□□□ -0.7
AC007879.1-201ENST00000435643 DDX54Q8TDD1 881 aaKnown RBP10.68□□□□□ -0.7
AC007879.1-201ENST00000435643 PNISRQ8TF01 805 aaKnown RBP10.68□□□□□ -0.7
AC007879.1-201ENST00000435643 PHACTR3Q96KR7 559 aa10.68□□□□□ -0.7
AC007879.1-201ENST00000435643 MRS2Q9HD23 443 aa10.68□□□□□ -0.7
AC007879.1-201ENST00000435643 CYP27B1O15528 508 aa10.67□□□□□ -0.7
AC007879.1-201ENST00000435643 FOXC1Q12948 553 aa10.67□□□□□ -0.7
AC007879.1-201ENST00000435643 PLEKHF1Q96S99 279 aa10.67□□□□□ -0.7
AC007879.1-201ENST00000435643 ADAMTS8Q9UP79 889 aa10.67□□□□□ -0.7
AC007879.1-201ENST00000435643 SPG7Q9UQ90 795 aa10.67□□□□□ -0.7
AC007879.1-201ENST00000435643 FCF1Q9Y324 198 aaKnown RBP10.67□□□□□ -0.7
AC007879.1-201ENST00000435643 SBF2Q86WG5 1849 aa10.66□□□□□ -0.7
AC007879.1-201ENST00000435643 ATP6V1AP38606 617 aa10.66□□□□□ -0.7
AC007879.1-201ENST00000435643 WDR43Q15061 677 aaKnown RBP eCLIP10.66□□□□□ -0.7
AC007879.1-201ENST00000435643 MTHFSDQ2M296 383 aaKnown RBP10.66□□□□□ -0.7
AC007879.1-201ENST00000435643 AMOTQ4VCS5 1084 aa10.66□□□□□ -0.7
AC007879.1-201ENST00000435643 SMYD5Q6GMV2 418 aa10.66□□□□□ -0.7
AC007879.1-201ENST00000435643 CRIPAKQ8N1N5 446 aa10.66□□□□□ -0.7
AC007879.1-201ENST00000435643 KAT6BQ8WYB5 2073 aa10.65□□□□□ -0.7
AC007879.1-201ENST00000435643 PLEKHG2Q9H7P9 1386 aa10.65□□□□□ -0.7
AC007879.1-201ENST00000435643 DDX11L8A8MPP1 907 aa10.65□□□□□ -0.7
AC007879.1-201ENST00000435643 CCER2I3L3R5 266 aa10.65□□□□□ -0.7
AC007879.1-201ENST00000435643 PHKG2P15735 406 aa10.65□□□□□ -0.7
AC007879.1-201ENST00000435643 FAM196AQ6ZSG2 479 aa10.65□□□□□ -0.7
AC007879.1-201ENST00000435643 FAM160A2Q8N612 972 aaPredicted RBP10.65□□□□□ -0.7
AC007879.1-201ENST00000435643 PCDH11XQ9BZA7 1347 aa10.64□□□□□ -0.71
AC007879.1-201ENST00000435643 PCDH11YQ9BZA8 1340 aa10.64□□□□□ -0.71
AC007879.1-201ENST00000435643 VIRMAQ69YN4 1812 aaKnown RBP10.64□□□□□ -0.71
AC007879.1-201ENST00000435643 FMNL1O95466 1100 aaPredicted RBP10.64□□□□□ -0.71
AC007879.1-201ENST00000435643 GCGRP47871 477 aa10.64□□□□□ -0.71
AC007879.1-201ENST00000435643 ZNF530Q6P9A1 599 aaPredicted RBP10.64□□□□□ -0.71
AC007879.1-201ENST00000435643 IFNL2Q8IZJ0 200 aa10.64□□□□□ -0.71
AC007879.1-201ENST00000435643 TOR4AQ9NXH8 423 aa10.64□□□□□ -0.71
AC007879.1-201ENST00000435643 SLC27A5Q9Y2P5 690 aa10.64□□□□□ -0.71
AC007879.1-201ENST00000435643 SALL2Q9Y467 1007 aaPredicted RBP10.64□□□□□ -0.71
AC007879.1-201ENST00000435643 DLG5Q8TDM6 1919 aa10.64□□□□□ -0.71
AC007879.1-201ENST00000435643 CCDC146Q8IYE0 955 aa10.63□□□□□ -0.71
AC007879.1-201ENST00000435643 NLRP7Q8WX94 980 aa10.63□□□□□ -0.71
AC007879.1-201ENST00000435643 PNNQ9H307 717 aaKnown RBP10.63□□□□□ -0.71
AC007879.1-201ENST00000435643 BCL9O00512 1426 aa10.63□□□□□ -0.71
AC007879.1-201ENST00000435643 TOGARAM1Q9Y4F4 1720 aa10.62□□□□□ -0.71
AC007879.1-201ENST00000435643 AVPP01185 164 aa10.62□□□□□ -0.71
AC007879.1-201ENST00000435643 AKAP4Q5JQC9 854 aa10.62□□□□□ -0.71
AC007879.1-201ENST00000435643 PTF1AQ7RTS3 328 aa10.62□□□□□ -0.71
AC007879.1-201ENST00000435643 SULF1Q8IWU6 871 aa10.62□□□□□ -0.71
AC007879.1-201ENST00000435643 GAS2L2Q8NHY3 880 aa10.62□□□□□ -0.71
AC007879.1-201ENST00000435643 RUNDC1Q96C34 613 aa10.62□□□□□ -0.71
AC007879.1-201ENST00000435643 ACSBG1Q96GR2 724 aa10.62□□□□□ -0.71
AC007879.1-201ENST00000435643 PHOX2BQ99453 314 aa10.62□□□□□ -0.71
AC007879.1-201ENST00000435643 PRDM9Q9NQV7 894 aa10.62□□□□□ -0.71
AC007879.1-201ENST00000435643 ITGB4P16144 1822 aa10.62□□□□□ -0.71
AC007879.1-201ENST00000435643 SCN11AQ9UI33 1791 aa10.62□□□□□ -0.71
AC007879.1-201ENST00000435643 DOT1LQ8TEK3 1739 aa10.61□□□□□ -0.71
AC007879.1-201ENST00000435643 KCNQ2O43526 872 aa10.61□□□□□ -0.71
AC007879.1-201ENST00000435643 TRIM37O94972 964 aa10.61□□□□□ -0.71
AC007879.1-201ENST00000435643 CD2BP2O95400 341 aaKnown RBP10.61□□□□□ -0.71
AC007879.1-201ENST00000435643 C1orf141Q5JVX7 400 aa10.61□□□□□ -0.71
AC007879.1-201ENST00000435643 LCE2AQ5TA79 106 aaPredicted RBP10.61□□□□□ -0.71
AC007879.1-201ENST00000435643 BRICD5Q6PL45 260 aa10.61□□□□□ -0.71
AC007879.1-201ENST00000435643 MPRIPQ6WCQ1 1025 aa10.61□□□□□ -0.71
AC007879.1-201ENST00000435643 FAM9BQ8IZU0 186 aa10.61□□□□□ -0.71
AC007879.1-201ENST00000435643 LGR6Q9HBX8 967 aa10.61□□□□□ -0.71
AC007879.1-201ENST00000435643 KDM6AO15550 1401 aaPredicted RBP10.6□□□□□ -0.71
AC007879.1-201ENST00000435643 NEFMP07197 916 aa10.6□□□□□ -0.71
AC007879.1-201ENST00000435643 HSP90AB1P08238 724 aaKnown RBP10.6□□□□□ -0.71
AC007879.1-201ENST00000435643 NFE2L2Q16236 605 aa10.6□□□□□ -0.71
AC007879.1-201ENST00000435643 MSS51Q4VC12 460 aa10.6□□□□□ -0.71
AC007879.1-201ENST00000435643 IL17REQ8NFR9 667 aa10.6□□□□□ -0.71
AC007879.1-201ENST00000435643 DCAF5Q96JK2 942 aa10.6□□□□□ -0.71
AC007879.1-201ENST00000435643 NHSQ6T4R5 1651 aa10.6□□□□□ -0.71
AC007879.1-201ENST00000435643 ADAMTS7Q9UKP4 1686 aa10.6□□□□□ -0.71
AC007879.1-201ENST00000435643 MAPK8IP3Q9UPT6 1336 aa10.59□□□□□ -0.71
AC007879.1-201ENST00000435643 TNS1Q9HBL0 1735 aaKnown RBP10.59□□□□□ -0.71
AC007879.1-201ENST00000435643 GNAT3A8MTJ3 354 aa10.59□□□□□ -0.71
AC007879.1-201ENST00000435643 RNMTO43148 476 aaKnown RBP10.59□□□□□ -0.71
AC007879.1-201ENST00000435643 TMPOP42166 694 aaKnown RBP10.59□□□□□ -0.71
AC007879.1-201ENST00000435643 MAP3K5Q99683 1374 aa10.59□□□□□ -0.71
AC007879.1-201ENST00000435643 APAF1O14727 1248 aa10.58□□□□□ -0.72
AC007879.1-201ENST00000435643 RIPK4P57078 832 aa10.58□□□□□ -0.72
AC007879.1-201ENST00000435643 DCTN1Q14203 1278 aa10.58□□□□□ -0.72
AC007879.1-201ENST00000435643 TREML4Q6UXN2 200 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms