RNA–Protein interactions for RNA: ENST00000434760.5

NUP50-210, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 763 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-210ENST00000434760 LAS1LQ9Y4W2 734 aaKnown RBP20.56■□□□□ 0.88
NUP50-210ENST00000434760 PARP10Q53GL7 1025 aa20.55■□□□□ 0.88
NUP50-210ENST00000434760 HDGFL1Q5TGJ6 251 aa20.55■□□□□ 0.88
NUP50-210ENST00000434760 COPS6Q7L5N1 327 aa20.55■□□□□ 0.88
NUP50-210ENST00000434760 GTF2E1P29083 439 aaPredicted RBP20.54■□□□□ 0.88
NUP50-210ENST00000434760 HOXA10P31260 410 aaPredicted RBP20.54■□□□□ 0.88
NUP50-210ENST00000434760 SLC51AQ86UW1 340 aa20.54■□□□□ 0.88
NUP50-210ENST00000434760 RRAGCQ9HB90 399 aa20.54■□□□□ 0.88
NUP50-210ENST00000434760 IFT57Q9NWB7 429 aa20.54■□□□□ 0.88
NUP50-210ENST00000434760 RNF123Q5XPI4 1314 aa20.53■□□□□ 0.88
NUP50-210ENST00000434760 FKBP4Q02790 459 aaKnown RBP eCLIP20.53■□□□□ 0.88
NUP50-210ENST00000434760 ADAMTSL1Q8N6G6 1762 aa20.53■□□□□ 0.88
NUP50-210ENST00000434760 PCNTO95613 3336 aa20.53■□□□□ 0.88
NUP50-210ENST00000434760 COL4A1P02462 1669 aa20.52■□□□□ 0.88
NUP50-210ENST00000434760 POTECB2RU33 542 aa20.52■□□□□ 0.88
NUP50-210ENST00000434760 DUSP27Q5VZP5 1158 aa20.52■□□□□ 0.88
NUP50-210ENST00000434760 NLRP10Q86W26 655 aa20.52■□□□□ 0.88
NUP50-210ENST00000434760 AIMP1Q12904 312 aaKnown RBP20.51■□□□□ 0.87
NUP50-210ENST00000434760 PPP1R42Q7Z4L9 355 aa20.51■□□□□ 0.87
NUP50-210ENST00000434760 DUOX1Q9NRD9 1551 aa20.51■□□□□ 0.87
NUP50-210ENST00000434760 ALDH1B1P30837 517 aa20.5■□□□□ 0.87
NUP50-210ENST00000434760 FSTL1Q12841 308 aa20.5■□□□□ 0.87
NUP50-210ENST00000434760 HSP90AB3PQ58FF7 597 aa20.5■□□□□ 0.87
NUP50-210ENST00000434760 DBF4Q9UBU7 674 aaPredicted RBP20.5■□□□□ 0.87
NUP50-210ENST00000434760 LTBP1Q14766 1721 aa20.5■□□□□ 0.87
NUP50-210ENST00000434760 ZNF316A6NFI3 1004 aaPredicted RBP20.49■□□□□ 0.87
NUP50-210ENST00000434760 GNAI1P63096 354 aa20.49■□□□□ 0.87
NUP50-210ENST00000434760 TCIRG1Q13488 830 aa20.49■□□□□ 0.87
NUP50-210ENST00000434760 SLC10A5Q5PT55 438 aa20.49■□□□□ 0.87
NUP50-210ENST00000434760 C16orf71Q8IYS4 520 aaPredicted RBP20.49■□□□□ 0.87
NUP50-210ENST00000434760 RPGRQ92834 1020 aaKnown RBP20.49■□□□□ 0.87
NUP50-210ENST00000434760 UTP14AQ9BVJ6 771 aaKnown RBP20.49■□□□□ 0.87
NUP50-210ENST00000434760 ZNF277Q9NRM2 450 aaPredicted RBP20.49■□□□□ 0.87
NUP50-210ENST00000434760 ZNF541Q9H0D2 1346 aa20.49■□□□□ 0.87
NUP50-210ENST00000434760 VEGFAP15692 232 aaPredicted RBP20.48■□□□□ 0.87
NUP50-210ENST00000434760 CALD1Q05682 793 aaKnown RBP20.48■□□□□ 0.87
NUP50-210ENST00000434760 RTKN2Q8IZC4 609 aa20.48■□□□□ 0.87
NUP50-210ENST00000434760 PLBD2Q8NHP8 589 aa20.48■□□□□ 0.87
NUP50-210ENST00000434760 CRAMP1Q96RY5 1269 aa20.48■□□□□ 0.87
NUP50-210ENST00000434760 PSMD1Q99460 953 aa20.48■□□□□ 0.87
NUP50-210ENST00000434760 APLP1P51693 650 aa20.47■□□□□ 0.87
NUP50-210ENST00000434760 SYNE4Q8N205 404 aa20.47■□□□□ 0.87
NUP50-210ENST00000434760 ABCC4O15439 1325 aa20.47■□□□□ 0.87
NUP50-210ENST00000434760 PPEF1O14829 653 aaPredicted RBP20.46■□□□□ 0.87
NUP50-210ENST00000434760 SMC1BQ8NDV3 1235 aa20.46■□□□□ 0.87
NUP50-210ENST00000434760 ISCA1Q9BUE6 129 aa20.46■□□□□ 0.87
NUP50-210ENST00000434760 CACNA1FO60840 1977 aa20.45■□□□□ 0.86
NUP50-210ENST00000434760 DDNO94850 711 aaPredicted RBP20.45■□□□□ 0.86
NUP50-210ENST00000434760 IARSP41252 1262 aaKnown RBP20.45■□□□□ 0.86
NUP50-210ENST00000434760 CCDC27Q2M243 656 aa20.45■□□□□ 0.86
NUP50-210ENST00000434760 CC2D2BQ6DHV5 1058 aa20.45■□□□□ 0.86
NUP50-210ENST00000434760 C8orf58Q8NAV2 365 aa20.45■□□□□ 0.86
NUP50-210ENST00000434760 L3MBTL3Q96JM7 780 aaPredicted RBP20.45■□□□□ 0.86
NUP50-210ENST00000434760 HYPKQ9NX55 129 aa20.45■□□□□ 0.86
NUP50-210ENST00000434760 SH3TC1Q8TE82 1336 aa20.45■□□□□ 0.86
NUP50-210ENST00000434760 DPY19L2Q6NUT2 758 aa20.44■□□□□ 0.86
NUP50-210ENST00000434760 ANKRD13DQ6ZTN6 518 aa20.44■□□□□ 0.86
NUP50-210ENST00000434760 RBM17Q96I25 401 aaKnown RBP20.44■□□□□ 0.86
NUP50-210ENST00000434760 NLRP3Q96P20 1036 aa20.44■□□□□ 0.86
NUP50-210ENST00000434760 MYH3P11055 1940 aa20.44■□□□□ 0.86
NUP50-210ENST00000434760 HCLS1P14317 486 aaPredicted RBP20.43■□□□□ 0.86
NUP50-210ENST00000434760 MRS2Q9HD23 443 aa20.43■□□□□ 0.86
NUP50-210ENST00000434760 FZD9O00144 591 aa20.42■□□□□ 0.86
NUP50-210ENST00000434760 WWC1Q8IX03 1113 aa20.42■□□□□ 0.86
NUP50-210ENST00000434760 DNAJC5GQ8N7S2 189 aa20.42■□□□□ 0.86
NUP50-210ENST00000434760 TRMT112Q9UI30 125 aaKnown RBP20.42■□□□□ 0.86
NUP50-210ENST00000434760 ELL2O00472 640 aaPredicted RBP20.41■□□□□ 0.86
NUP50-210ENST00000434760 TSPYL6Q8N831 410 aa20.41■□□□□ 0.86
NUP50-210ENST00000434760 TSR2Q969E8 191 aaKnown RBP20.41■□□□□ 0.86
NUP50-210ENST00000434760 ZNF428Q96B54 188 aa20.41■□□□□ 0.86
NUP50-210ENST00000434760 PHAXQ9H814 394 aaKnown RBP20.41■□□□□ 0.86
NUP50-210ENST00000434760 ATP5J2-PTCD1G3V325 749 aa20.4■□□□□ 0.86
NUP50-210ENST00000434760 POTEIP0CG38 1075 aa20.4■□□□□ 0.86
NUP50-210ENST00000434760 POTEJP0CG39 1038 aa20.4■□□□□ 0.86
NUP50-210ENST00000434760 HTRA3P83110 453 aa20.4■□□□□ 0.86
NUP50-210ENST00000434760 NCBP3Q53F19 620 aaKnown RBP20.4■□□□□ 0.86
NUP50-210ENST00000434760 ATP6V0A2Q9Y487 856 aa20.4■□□□□ 0.86
NUP50-210ENST00000434760 IL16Q14005 1332 aa20.39■□□□□ 0.85
NUP50-210ENST00000434760 ANP32CO43423 234 aa20.39■□□□□ 0.85
NUP50-210ENST00000434760 TRIM28Q13263 835 aaKnown RBP20.39■□□□□ 0.85
NUP50-210ENST00000434760 GRIPAP1Q4V328 841 aa20.39■□□□□ 0.85
NUP50-210ENST00000434760 SPEF2Q9C093 1822 aa20.39■□□□□ 0.85
NUP50-210ENST00000434760 GOLGA2Q08379 1002 aa20.38■□□□□ 0.85
NUP50-210ENST00000434760 GRAPQ13588 217 aa20.37■□□□□ 0.85
NUP50-210ENST00000434760 GRAPLQ8TC17 118 aaPredicted RBP20.37■□□□□ 0.85
NUP50-210ENST00000434760 FAM89AQ96GI7 184 aa20.37■□□□□ 0.85
NUP50-210ENST00000434760 TAF1DQ9H5J8 278 aaPredicted RBP20.37■□□□□ 0.85
NUP50-210ENST00000434760 IQCA1LA6NCM1 817 aa20.36■□□□□ 0.85
NUP50-210ENST00000434760 TCERG1O14776 1098 aaKnown RBP20.36■□□□□ 0.85
NUP50-210ENST00000434760 RTFDC1Q9BY42 306 aaPredicted RBP20.36■□□□□ 0.85
NUP50-210ENST00000434760 FANCIQ9NVI1 1328 aa20.35■□□□□ 0.85
NUP50-210ENST00000434760 SF3B3Q15393 1217 aaKnown RBP20.35■□□□□ 0.85
NUP50-210ENST00000434760 CCDC30Q5VVM6 783 aa20.35■□□□□ 0.85
NUP50-210ENST00000434760 GPC2Q8N158 579 aa20.35■□□□□ 0.85
NUP50-210ENST00000434760 DDX46Q7L014 1031 aaKnown RBP20.34■□□□□ 0.85
NUP50-210ENST00000434760 PSME4Q14997 1843 aa20.34■□□□□ 0.85
NUP50-210ENST00000434760 BBOX1O75936 387 aa20.33■□□□□ 0.85
NUP50-210ENST00000434760 CHADLQ6NUI6 762 aa20.33■□□□□ 0.85
NUP50-210ENST00000434760 RIC3Q7Z5B4 369 aa20.33■□□□□ 0.85
NUP50-210ENST00000434760 SP8Q8IXZ3 490 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms