RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 BCS1LQ9Y276 419 aa8.67□□□□□ -1.02
PTPN4-205ENST00000433888 FAM196BA6NMK8 535 aa8.66□□□□□ -1.02
PTPN4-205ENST00000433888 NID1P14543 1247 aa8.66□□□□□ -1.02
PTPN4-205ENST00000433888 IGFBP4P22692 258 aa8.66□□□□□ -1.02
PTPN4-205ENST00000433888 CHMP7Q8WUX9 453 aaPredicted RBP8.66□□□□□ -1.02
PTPN4-205ENST00000433888 ARXQ96QS3 562 aa8.66□□□□□ -1.02
PTPN4-205ENST00000433888 USP17L15C9J2P7 530 aa8.65□□□□□ -1.02
PTPN4-205ENST00000433888 USP17L10C9JJH3 530 aa8.65□□□□□ -1.02
PTPN4-205ENST00000433888 USP17L13C9JLJ4 530 aa8.65□□□□□ -1.02
PTPN4-205ENST00000433888 USP17L12C9JPN9 530 aa8.65□□□□□ -1.02
PTPN4-205ENST00000433888 USP17L11C9JVI0 530 aa8.65□□□□□ -1.02
PTPN4-205ENST00000433888 USP17L21D6R901 530 aa8.65□□□□□ -1.02
PTPN4-205ENST00000433888 USP17L18D6R9N7 530 aa8.65□□□□□ -1.02
PTPN4-205ENST00000433888 USP17L22D6RA61 530 aa8.65□□□□□ -1.02
PTPN4-205ENST00000433888 USP17L17D6RBQ6 530 aa8.65□□□□□ -1.02
PTPN4-205ENST00000433888 USP17L19D6RCP7 530 aa8.65□□□□□ -1.02
PTPN4-205ENST00000433888 USP17L20D6RJB6 530 aa8.65□□□□□ -1.02
PTPN4-205ENST00000433888 LGR5O75473 907 aa8.65□□□□□ -1.02
PTPN4-205ENST00000433888 ITGB7P26010 798 aa8.65□□□□□ -1.02
PTPN4-205ENST00000433888 USP17L24Q0WX57 530 aa8.65□□□□□ -1.02
PTPN4-205ENST00000433888 NEUROD1Q13562 356 aa8.65□□□□□ -1.02
PTPN4-205ENST00000433888 HIF1AQ16665 826 aa8.65□□□□□ -1.02
PTPN4-205ENST00000433888 RTN1Q16799 776 aa8.65□□□□□ -1.02
PTPN4-205ENST00000433888 IER5Q5VY09 327 aa8.65□□□□□ -1.02
PTPN4-205ENST00000433888 ANKMY2Q8IV38 441 aa8.65□□□□□ -1.02
PTPN4-205ENST00000433888 NGLY1Q96IV0 654 aa8.65□□□□□ -1.02
PTPN4-205ENST00000433888 HINFPQ9BQA5 517 aa8.65□□□□□ -1.02
PTPN4-205ENST00000433888 GSX2Q9BZM3 304 aa8.65□□□□□ -1.02
PTPN4-205ENST00000433888 GRNP28799 593 aaKnown RBP8.64□□□□□ -1.03
PTPN4-205ENST00000433888 LMOD1P29536 600 aaPredicted RBP8.64□□□□□ -1.03
PTPN4-205ENST00000433888 BHMTQ93088 406 aa8.64□□□□□ -1.03
PTPN4-205ENST00000433888 VRTNQ9H8Y1 702 aa8.64□□□□□ -1.03
PTPN4-205ENST00000433888 SPDYE3A6NKU9 549 aa8.63□□□□□ -1.03
PTPN4-205ENST00000433888 TGFBR3LH3BV60 316 aa8.63□□□□□ -1.03
PTPN4-205ENST00000433888 DOC2BQ14184 412 aa8.63□□□□□ -1.03
PTPN4-205ENST00000433888 EFCC1Q9HA90 598 aa8.63□□□□□ -1.03
PTPN4-205ENST00000433888 FAM229AH3BQW9 127 aa8.62□□□□□ -1.03
PTPN4-205ENST00000433888 GATA4P43694 442 aa8.62□□□□□ -1.03
PTPN4-205ENST00000433888 XP32Q5T750 250 aa8.62□□□□□ -1.03
PTPN4-205ENST00000433888 ILDR2Q71H61 639 aa8.62□□□□□ -1.03
PTPN4-205ENST00000433888 WEE1P30291 646 aa8.61□□□□□ -1.03
PTPN4-205ENST00000433888 PRRT3Q5FWE3 981 aa8.61□□□□□ -1.03
PTPN4-205ENST00000433888 CFAP70Q5T0N1 1121 aa8.61□□□□□ -1.03
PTPN4-205ENST00000433888 SLC6A14Q9UN76 642 aa8.6□□□□□ -1.03
PTPN4-205ENST00000433888 INPP5BP32019 993 aa8.59□□□□□ -1.03
PTPN4-205ENST00000433888 TRIM28Q13263 835 aaKnown RBP8.59□□□□□ -1.03
PTPN4-205ENST00000433888 CCINQ13939 588 aa8.59□□□□□ -1.03
PTPN4-205ENST00000433888 RSPO4Q2I0M5 234 aaPredicted RBP8.59□□□□□ -1.03
PTPN4-205ENST00000433888 UBE2OQ9C0C9 1292 aaKnown RBP8.59□□□□□ -1.03
PTPN4-205ENST00000433888 QTRT2Q9H974 415 aaKnown RBP8.59□□□□□ -1.03
PTPN4-205ENST00000433888 LILRB5O75023 590 aa8.58□□□□□ -1.04
PTPN4-205ENST00000433888 GRIK4Q16099 956 aa8.58□□□□□ -1.04
PTPN4-205ENST00000433888 DNAJB12Q9NXW2 375 aaKnown RBP8.58□□□□□ -1.04
PTPN4-205ENST00000433888 KLK14Q9P0G3 267 aa8.58□□□□□ -1.04
PTPN4-205ENST00000433888 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.58□□□□□ -1.04
PTPN4-205ENST00000433888 FOXO3O43524 673 aa8.57□□□□□ -1.04
PTPN4-205ENST00000433888 NKAPLQ5M9Q1 402 aa8.57□□□□□ -1.04
PTPN4-205ENST00000433888 MYO19Q96H55 970 aa8.57□□□□□ -1.04
PTPN4-205ENST00000433888 NAGPAQ9UK23 515 aa8.57□□□□□ -1.04
PTPN4-205ENST00000433888 APBA3O96018 575 aa8.56□□□□□ -1.04
PTPN4-205ENST00000433888 IDH3AP50213 366 aa8.56□□□□□ -1.04
PTPN4-205ENST00000433888 SEMA6BQ9H3T3 888 aa8.56□□□□□ -1.04
PTPN4-205ENST00000433888 IGFLR1Q9H665 355 aa8.56□□□□□ -1.04
PTPN4-205ENST00000433888 TPSG1Q9NRR2 321 aa8.56□□□□□ -1.04
PTPN4-205ENST00000433888 ZFATQ9P243 1243 aa8.56□□□□□ -1.04
PTPN4-205ENST00000433888 ZNF777Q9ULD5 760 aaPredicted RBP8.56□□□□□ -1.04
PTPN4-205ENST00000433888 A0A0A0MRY4 1105 aa8.55□□□□□ -1.04
PTPN4-205ENST00000433888 ZBTB42B2RXF5 422 aa8.55□□□□□ -1.04
PTPN4-205ENST00000433888 NFKB1P19838 968 aa8.55□□□□□ -1.04
PTPN4-205ENST00000433888 AFF1P51825 1210 aaKnown RBP8.55□□□□□ -1.04
PTPN4-205ENST00000433888 DGKZQ13574 1117 aa8.55□□□□□ -1.04
PTPN4-205ENST00000433888 TRAPPC3LQ5T215 181 aa8.55□□□□□ -1.04
PTPN4-205ENST00000433888 Q8N3U1 123 aa8.55□□□□□ -1.04
PTPN4-205ENST00000433888 NUDT8Q8WV74 236 aa8.55□□□□□ -1.04
PTPN4-205ENST00000433888 C11orf16Q9NQ32 467 aa8.55□□□□□ -1.04
PTPN4-205ENST00000433888 MAP3K6O95382 1288 aa8.54□□□□□ -1.04
PTPN4-205ENST00000433888 SELPP16109 830 aa8.54□□□□□ -1.04
PTPN4-205ENST00000433888 TBC1D8BQ0IIM8 1120 aa8.54□□□□□ -1.04
PTPN4-205ENST00000433888 C11orf91Q3C1V1 193 aa8.54□□□□□ -1.04
PTPN4-205ENST00000433888 PSAPL1Q6NUJ1 521 aa8.54□□□□□ -1.04
PTPN4-205ENST00000433888 FAM200AQ8TCP9 573 aa8.54□□□□□ -1.04
PTPN4-205ENST00000433888 IFT43Q96FT9 208 aa8.54□□□□□ -1.04
PTPN4-205ENST00000433888 NACC1Q96RE7 527 aa8.54□□□□□ -1.04
PTPN4-205ENST00000433888 JPH1Q9HDC5 661 aaPredicted RBP8.54□□□□□ -1.04
PTPN4-205ENST00000433888 LRFN2Q9ULH4 789 aa8.54□□□□□ -1.04
PTPN4-205ENST00000433888 OPLAHO14841 1288 aa8.53□□□□□ -1.04
PTPN4-205ENST00000433888 MICAL2O94851 1124 aa8.53□□□□□ -1.04
PTPN4-205ENST00000433888 GRIK5Q16478 980 aa8.53□□□□□ -1.04
PTPN4-205ENST00000433888 CDCA8Q53HL2 280 aa8.53□□□□□ -1.04
PTPN4-205ENST00000433888 PNMA5Q96PV4 448 aa8.53□□□□□ -1.04
PTPN4-205ENST00000433888 C9orf172C9J069 976 aa8.52□□□□□ -1.05
PTPN4-205ENST00000433888 TARSP26639 723 aaKnown RBP8.52□□□□□ -1.05
PTPN4-205ENST00000433888 ARSDP51689 593 aa8.52□□□□□ -1.05
PTPN4-205ENST00000433888 ADGRE1Q14246 886 aa8.52□□□□□ -1.05
PTPN4-205ENST00000433888 ELNP15502 786 aa8.51□□□□□ -1.05
PTPN4-205ENST00000433888 EPB42P16452 691 aa8.51□□□□□ -1.05
PTPN4-205ENST00000433888 TRPM4Q8TD43 1214 aa8.51□□□□□ -1.05
PTPN4-205ENST00000433888 LPIN3Q9BQK8 851 aa8.51□□□□□ -1.05
PTPN4-205ENST00000433888 RGS9O75916 674 aaPredicted RBP8.5□□□□□ -1.05
PTPN4-205ENST00000433888 EGFRP00533 1210 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms