RNA–Protein interactions for RNA: ENST00000433496.5

RFC4-207, Transcript of replication factor C subunit 4, humanhuman

TSL 5 BASIC

Gene RFC4, Length 1,111 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-207ENST00000433496 SUSD4Q5VX71 490 aa12.53□□□□□ -0.4
RFC4-207ENST00000433496 ZNF34Q8IZ26 560 aa12.53□□□□□ -0.4
RFC4-207ENST00000433496 CFAP44Q96MT7 982 aa12.53□□□□□ -0.4
RFC4-207ENST00000433496 TMX4Q9H1E5 349 aaPredicted RBP12.53□□□□□ -0.4
RFC4-207ENST00000433496 DDX21Q9NR30 783 aaKnown RBP eCLIP12.53□□□□□ -0.4
RFC4-207ENST00000433496 UBN2Q6ZU65 1347 aa12.53□□□□□ -0.4
RFC4-207ENST00000433496 APAF1O14727 1248 aa12.52□□□□□ -0.41
RFC4-207ENST00000433496 PRELPP51888 382 aa12.52□□□□□ -0.41
RFC4-207ENST00000433496 GNAI1P63096 354 aa12.52□□□□□ -0.41
RFC4-207ENST00000433496 FKBP4Q02790 459 aaKnown RBP eCLIP12.52□□□□□ -0.41
RFC4-207ENST00000433496 PDIA6Q15084 440 aa12.52□□□□□ -0.41
RFC4-207ENST00000433496 CRY2Q49AN0 593 aa12.52□□□□□ -0.41
RFC4-207ENST00000433496 COPS6Q7L5N1 327 aa12.52□□□□□ -0.41
RFC4-207ENST00000433496 SMC1BQ8NDV3 1235 aa12.52□□□□□ -0.41
RFC4-207ENST00000433496 XAGE3Q8WTP9 111 aa12.52□□□□□ -0.41
RFC4-207ENST00000433496 RBM17Q96I25 401 aaKnown RBP12.52□□□□□ -0.41
RFC4-207ENST00000433496 UTP14AQ9BVJ6 771 aaKnown RBP12.52□□□□□ -0.41
RFC4-207ENST00000433496 CHPF2Q9P2E5 772 aa12.52□□□□□ -0.41
RFC4-207ENST00000433496 DBF4Q9UBU7 674 aaPredicted RBP12.52□□□□□ -0.41
RFC4-207ENST00000433496 RNF123Q5XPI4 1314 aa12.52□□□□□ -0.41
RFC4-207ENST00000433496 SCN4AP35499 1836 aa12.51□□□□□ -0.41
RFC4-207ENST00000433496 NTSR2O95665 410 aa12.51□□□□□ -0.41
RFC4-207ENST00000433496 KRT24Q2M2I5 525 aa12.51□□□□□ -0.41
RFC4-207ENST00000433496 IFT57Q9NWB7 429 aa12.51□□□□□ -0.41
RFC4-207ENST00000433496 CEP350Q5VT06 3117 aa12.51□□□□□ -0.41
RFC4-207ENST00000433496 ANP32CO43423 234 aa12.5□□□□□ -0.41
RFC4-207ENST00000433496 DUSP27Q5VZP5 1158 aa12.5□□□□□ -0.41
RFC4-207ENST00000433496 CC2D2BQ6DHV5 1058 aa12.5□□□□□ -0.41
RFC4-207ENST00000433496 LRP10Q7Z4F1 713 aa12.5□□□□□ -0.41
RFC4-207ENST00000433496 C7orf43Q8WVR3 580 aa12.5□□□□□ -0.41
RFC4-207ENST00000433496 NLRP3Q96P20 1036 aa12.5□□□□□ -0.41
RFC4-207ENST00000433496 CHMP4AQ9BY43 222 aa12.5□□□□□ -0.41
RFC4-207ENST00000433496 MBIPQ9NS73 344 aa12.5□□□□□ -0.41
RFC4-207ENST00000433496 HYPKQ9NX55 129 aa12.5□□□□□ -0.41
RFC4-207ENST00000433496 ZNF316A6NFI3 1004 aaPredicted RBP12.49□□□□□ -0.41
RFC4-207ENST00000433496 PPEF1O14829 653 aaPredicted RBP12.49□□□□□ -0.41
RFC4-207ENST00000433496 GRIPAP1Q4V328 841 aa12.49□□□□□ -0.41
RFC4-207ENST00000433496 CRAMP1Q96RY5 1269 aa12.49□□□□□ -0.41
RFC4-207ENST00000433496 ZNF277Q9NRM2 450 aaPredicted RBP12.49□□□□□ -0.41
RFC4-207ENST00000433496 SH3TC1Q8TE82 1336 aa12.48□□□□□ -0.41
RFC4-207ENST00000433496 IQCA1LA6NCM1 817 aa12.48□□□□□ -0.41
RFC4-207ENST00000433496 HOXA10P31260 410 aaPredicted RBP12.48□□□□□ -0.41
RFC4-207ENST00000433496 GOLGA2Q08379 1002 aa12.48□□□□□ -0.41
RFC4-207ENST00000433496 TCIRG1Q13488 830 aa12.48□□□□□ -0.41
RFC4-207ENST00000433496 PLBD2Q8NHP8 589 aa12.48□□□□□ -0.41
RFC4-207ENST00000433496 JDP2Q8WYK2 163 aa12.48□□□□□ -0.41
RFC4-207ENST00000433496 MRS2Q9HD23 443 aa12.48□□□□□ -0.41
RFC4-207ENST00000433496 TRMT112Q9UI30 125 aaKnown RBP12.48□□□□□ -0.41
RFC4-207ENST00000433496 DDX60Q8IY21 1712 aaKnown RBP12.48□□□□□ -0.41
RFC4-207ENST00000433496 IARSP41252 1262 aaKnown RBP12.47□□□□□ -0.41
RFC4-207ENST00000433496 OLFM4Q6UX06 510 aa12.47□□□□□ -0.41
RFC4-207ENST00000433496 ANKRD13DQ6ZTN6 518 aa12.47□□□□□ -0.41
RFC4-207ENST00000433496 NLRP10Q86W26 655 aa12.47□□□□□ -0.41
RFC4-207ENST00000433496 SYNE4Q8N205 404 aa12.47□□□□□ -0.41
RFC4-207ENST00000433496 PSMD1Q99460 953 aa12.47□□□□□ -0.41
RFC4-207ENST00000433496 TCERG1O14776 1098 aaKnown RBP12.46□□□□□ -0.41
RFC4-207ENST00000433496 DDNO94850 711 aaPredicted RBP12.46□□□□□ -0.41
RFC4-207ENST00000433496 ZNF853P0CG23 659 aa12.46□□□□□ -0.41
RFC4-207ENST00000433496 TAF1P21675 1872 aa12.46□□□□□ -0.42
RFC4-207ENST00000433496 CACNA1FO60840 1977 aa12.45□□□□□ -0.42
RFC4-207ENST00000433496 ELL2O00472 640 aaPredicted RBP12.45□□□□□ -0.42
RFC4-207ENST00000433496 SLC10A5Q5PT55 438 aa12.45□□□□□ -0.42
RFC4-207ENST00000433496 DDX46Q7L014 1031 aaKnown RBP12.45□□□□□ -0.42
RFC4-207ENST00000433496 RIC3Q7Z5B4 369 aa12.45□□□□□ -0.42
RFC4-207ENST00000433496 ABCC4O15439 1325 aa12.44□□□□□ -0.42
RFC4-207ENST00000433496 ZNF541Q9H0D2 1346 aa12.44□□□□□ -0.42
RFC4-207ENST00000433496 DDX58O95786 925 aaKnown RBP12.44□□□□□ -0.42
RFC4-207ENST00000433496 HCLS1P14317 486 aaPredicted RBP12.44□□□□□ -0.42
RFC4-207ENST00000433496 EIF6P56537 245 aaKnown RBP12.44□□□□□ -0.42
RFC4-207ENST00000433496 CCDC30Q5VVM6 783 aa12.44□□□□□ -0.42
RFC4-207ENST00000433496 C3orf67Q6ZVT6 689 aa12.44□□□□□ -0.42
RFC4-207ENST00000433496 LARGE2Q8N3Y3 721 aa12.44□□□□□ -0.42
RFC4-207ENST00000433496 SUPT20HQ8NEM7 779 aa12.44□□□□□ -0.42
RFC4-207ENST00000433496 ATP5J2-PTCD1G3V325 749 aa12.43□□□□□ -0.42
RFC4-207ENST00000433496 HSP90B1P14625 803 aaKnown RBP12.43□□□□□ -0.42
RFC4-207ENST00000433496 CCDC184Q52MB2 194 aa12.43□□□□□ -0.42
RFC4-207ENST00000433496 NIM1KQ8IY84 436 aa12.43□□□□□ -0.42
RFC4-207ENST00000433496 L3MBTL3Q96JM7 780 aaPredicted RBP12.43□□□□□ -0.42
RFC4-207ENST00000433496 STK31Q9BXU1 1019 aa12.43□□□□□ -0.42
RFC4-207ENST00000433496 ATP6V0A2Q9Y487 856 aa12.43□□□□□ -0.42
RFC4-207ENST00000433496 SNED1Q8TER0 1413 aa12.43□□□□□ -0.42
RFC4-207ENST00000433496 MYH3P11055 1940 aa12.43□□□□□ -0.42
RFC4-207ENST00000433496 LRRC37AA6NMS7 1700 aa12.42□□□□□ -0.42
RFC4-207ENST00000433496 POTECB2RU33 542 aa12.42□□□□□ -0.42
RFC4-207ENST00000433496 PPIP5K2O43314 1243 aa12.42□□□□□ -0.42
RFC4-207ENST00000433496 BBOX1O75936 387 aa12.42□□□□□ -0.42
RFC4-207ENST00000433496 LMOD1P29536 600 aaPredicted RBP12.42□□□□□ -0.42
RFC4-207ENST00000433496 CCDC27Q2M243 656 aa12.42□□□□□ -0.42
RFC4-207ENST00000433496 CHADLQ6NUI6 762 aa12.42□□□□□ -0.42
RFC4-207ENST00000433496 DPP8Q6V1X1 898 aaPredicted RBP12.42□□□□□ -0.42
RFC4-207ENST00000433496 TMC4Q7Z404 712 aa12.42□□□□□ -0.42
RFC4-207ENST00000433496 GPC2Q8N158 579 aa12.42□□□□□ -0.42
RFC4-207ENST00000433496 ZNF428Q96B54 188 aa12.42□□□□□ -0.42
RFC4-207ENST00000433496 HACL1Q9UJ83 578 aa12.42□□□□□ -0.42
RFC4-207ENST00000433496 FZD9O00144 591 aa12.41□□□□□ -0.42
RFC4-207ENST00000433496 GRAPQ13588 217 aa12.41□□□□□ -0.42
RFC4-207ENST00000433496 EAPPQ56P03 285 aaPredicted RBP12.41□□□□□ -0.42
RFC4-207ENST00000433496 LDHDQ86WU2 507 aa12.41□□□□□ -0.42
RFC4-207ENST00000433496 C8orf58Q8NAV2 365 aa12.41□□□□□ -0.42
RFC4-207ENST00000433496 GRAPLQ8TC17 118 aaPredicted RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms