RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 ACEP12821 1306 aa4.43□□□□□ -1.7
SHPRH-205ENST00000433355 CIAO1O76071 339 aa4.43□□□□□ -1.7
SHPRH-205ENST00000433355 ARHGAP27Q6ZUM4 889 aa4.43□□□□□ -1.7
SHPRH-205ENST00000433355 KCNG4Q8TDN1 519 aa4.43□□□□□ -1.7
SHPRH-205ENST00000433355 ERCC4Q92889 916 aaPredicted RBP4.43□□□□□ -1.7
SHPRH-205ENST00000433355 SMC3Q9UQE7 1217 aa4.43□□□□□ -1.7
SHPRH-205ENST00000433355 MCM4P33991 863 aa4.43□□□□□ -1.7
SHPRH-205ENST00000433355 NFKBIBQ15653 356 aa4.43□□□□□ -1.7
SHPRH-205ENST00000433355 ANKRD45Q5TZF3 282 aa4.43□□□□□ -1.7
SHPRH-205ENST00000433355 DDX12PQ92771 950 aa4.43□□□□□ -1.7
SHPRH-205ENST00000433355 DEKP35659 375 aaKnown RBP4.42□□□□□ -1.7
SHPRH-205ENST00000433355 GORABQ5T7V8 394 aa4.42□□□□□ -1.7
SHPRH-205ENST00000433355 RAB34Q9BZG1 259 aa4.42□□□□□ -1.7
SHPRH-205ENST00000433355 STK26Q9P289 416 aa4.42□□□□□ -1.7
SHPRH-205ENST00000433355 CALM1P0DP23 149 aa4.42□□□□□ -1.7
SHPRH-205ENST00000433355 CALM2P0DP24 149 aa4.42□□□□□ -1.7
SHPRH-205ENST00000433355 CALM3P0DP25 149 aa4.42□□□□□ -1.7
SHPRH-205ENST00000433355 KIF6Q6ZMV9 814 aa4.42□□□□□ -1.7
SHPRH-205ENST00000433355 RTL9Q8NET4 1388 aa4.42□□□□□ -1.7
SHPRH-205ENST00000433355 PDE6BP35913 854 aa4.42□□□□□ -1.7
SHPRH-205ENST00000433355 PLEKHF1Q96S99 279 aa4.42□□□□□ -1.7
SHPRH-205ENST00000433355 GOLGA6L19H0YKK7 550 aa4.42□□□□□ -1.7
SHPRH-205ENST00000433355 CDR1P51861 262 aa4.42□□□□□ -1.7
SHPRH-205ENST00000433355 CCDC183Q5T5S1 534 aa4.42□□□□□ -1.7
SHPRH-205ENST00000433355 AMOTL2Q9Y2J4 779 aa4.42□□□□□ -1.7
SHPRH-205ENST00000433355 NFAT5O94916 1531 aa4.42□□□□□ -1.7
SHPRH-205ENST00000433355 CCDC148Q8NFR7 591 aa4.42□□□□□ -1.7
SHPRH-205ENST00000433355 ADAMTS7Q9UKP4 1686 aa4.42□□□□□ -1.7
SHPRH-205ENST00000433355 GIGYF1O75420 1035 aaPredicted RBP4.42□□□□□ -1.7
SHPRH-205ENST00000433355 STIM1Q13586 685 aa4.42□□□□□ -1.7
SHPRH-205ENST00000433355 CALR3Q96L12 384 aaKnown RBP4.42□□□□□ -1.7
SHPRH-205ENST00000433355 ABCD1P33897 745 aa4.42□□□□□ -1.7
SHPRH-205ENST00000433355 TRIM28Q13263 835 aaKnown RBP4.42□□□□□ -1.7
SHPRH-205ENST00000433355 RAB3GAP1Q15042 981 aa4.42□□□□□ -1.7
SHPRH-205ENST00000433355 KCNG1Q9UIX4 513 aa4.42□□□□□ -1.7
SHPRH-205ENST00000433355 PKD1L3Q7Z443 1732 aa4.42□□□□□ -1.7
SHPRH-205ENST00000433355 PIK3C2AO00443 1686 aa4.42□□□□□ -1.7
SHPRH-205ENST00000433355 TSR1Q2NL82 804 aaKnown RBP4.42□□□□□ -1.7
SHPRH-205ENST00000433355 RPGRIP1Q96KN7 1286 aa4.42□□□□□ -1.7
SHPRH-205ENST00000433355 LOXHD1Q8IVV2 1947 aa4.42□□□□□ -1.7
SHPRH-205ENST00000433355 CRB1P82279 1406 aa4.42□□□□□ -1.7
SHPRH-205ENST00000433355 SLC4A2P04920 1241 aa4.42□□□□□ -1.7
SHPRH-205ENST00000433355 KIF5BP33176 963 aa4.42□□□□□ -1.7
SHPRH-205ENST00000433355 FAM200AQ8TCP9 573 aa4.42□□□□□ -1.7
SHPRH-205ENST00000433355 FAM107BQ9H098 131 aa4.42□□□□□ -1.7
SHPRH-205ENST00000433355 ANO2Q9NQ90 1003 aa4.42□□□□□ -1.7
SHPRH-205ENST00000433355 THRAP3Q9Y2W1 955 aaKnown RBP4.42□□□□□ -1.7
SHPRH-205ENST00000433355 ERICH2A1L162 156 aa4.41□□□□□ -1.7
SHPRH-205ENST00000433355 GNAQP50148 359 aa4.41□□□□□ -1.7
SHPRH-205ENST00000433355 TSGA10IPQ3SY00 556 aa4.41□□□□□ -1.7
SHPRH-205ENST00000433355 CCDC83Q8IWF9 413 aa4.41□□□□□ -1.7
SHPRH-205ENST00000433355 ELOA2Q8IYF1 753 aaPredicted RBP4.41□□□□□ -1.7
SHPRH-205ENST00000433355 CTAGE1Q96RT6 745 aa4.41□□□□□ -1.7
SHPRH-205ENST00000433355 COPRSQ9NQ92 184 aa4.41□□□□□ -1.7
SHPRH-205ENST00000433355 ATP8B2P98198 1209 aa4.41□□□□□ -1.7
SHPRH-205ENST00000433355 CCDC158Q5M9N0 1113 aa4.41□□□□□ -1.7
SHPRH-205ENST00000433355 SULT6B1Q6IMI4 303 aa4.41□□□□□ -1.7
SHPRH-205ENST00000433355 SMTNL1A8MU46 457 aa4.41□□□□□ -1.7
SHPRH-205ENST00000433355 GALNT17Q6IS24 598 aa4.41□□□□□ -1.7
SHPRH-205ENST00000433355 CCDC191Q8NCU4 936 aa4.41□□□□□ -1.7
SHPRH-205ENST00000433355 GBP3Q9H0R5 595 aa4.41□□□□□ -1.7
SHPRH-205ENST00000433355 DDX21Q9NR30 783 aaKnown RBP eCLIP4.41□□□□□ -1.7
SHPRH-205ENST00000433355 SMC2O95347 1197 aa4.41□□□□□ -1.7
SHPRH-205ENST00000433355 SYCP1Q15431 976 aa4.41□□□□□ -1.7
SHPRH-205ENST00000433355 PANK1Q8TE04 598 aa4.41□□□□□ -1.7
SHPRH-205ENST00000433355 MAF1Q9H063 256 aa4.41□□□□□ -1.7
SHPRH-205ENST00000433355 PRDM11Q9NQV5 511 aa4.41□□□□□ -1.7
SHPRH-205ENST00000433355 MORC2Q9Y6X9 1032 aaPredicted RBP4.41□□□□□ -1.7
SHPRH-205ENST00000433355 CDHR2Q9BYE9 1310 aa4.41□□□□□ -1.7
SHPRH-205ENST00000433355 CLCN1P35523 988 aa4.41□□□□□ -1.7
SHPRH-205ENST00000433355 FBXL16Q8N461 479 aa4.41□□□□□ -1.7
SHPRH-205ENST00000433355 ZNF831Q5JPB2 1677 aa4.41□□□□□ -1.7
SHPRH-205ENST00000433355 ZSCAN12O43309 604 aa4.41□□□□□ -1.7
SHPRH-205ENST00000433355 GSTO1P78417 241 aa4.41□□□□□ -1.7
SHPRH-205ENST00000433355 AKAP17AQ02040 695 aaKnown RBP4.41□□□□□ -1.7
SHPRH-205ENST00000433355 APOBRQ0VD83 1088 aa4.41□□□□□ -1.7
SHPRH-205ENST00000433355 GIMAP6Q6P9H5 292 aa4.41□□□□□ -1.7
SHPRH-205ENST00000433355 ERLIN1O75477 346 aa4.41□□□□□ -1.7
SHPRH-205ENST00000433355 GGNBP2Q9H3C7 697 aa4.41□□□□□ -1.7
SHPRH-205ENST00000433355 NOB1Q9ULX3 412 aaKnown RBP4.41□□□□□ -1.7
SHPRH-205ENST00000433355 TRIM6-TRIM34B2RNG4 842 aa4.41□□□□□ -1.7
SHPRH-205ENST00000433355 VAMP4O75379 141 aa4.41□□□□□ -1.7
SHPRH-205ENST00000433355 CSB-PGBD3P0DP91 1061 aa4.41□□□□□ -1.7
SHPRH-205ENST00000433355 TRAPPC10P48553 1259 aa4.41□□□□□ -1.7
SHPRH-205ENST00000433355 PROSER2Q86WR7 435 aaPredicted RBP4.41□□□□□ -1.7
SHPRH-205ENST00000433355 ANKRD18AQ8IVF6 992 aa4.41□□□□□ -1.7
SHPRH-205ENST00000433355 RUBCNQ92622 972 aa4.41□□□□□ -1.7
SHPRH-205ENST00000433355 SH3TC1Q8TE82 1336 aa4.41□□□□□ -1.7
SHPRH-205ENST00000433355 ZNF445P59923 1031 aa4.41□□□□□ -1.7
SHPRH-205ENST00000433355 C8orf34Q49A92 452 aa4.41□□□□□ -1.7
SHPRH-205ENST00000433355 CCDC150Q8NCX0 1101 aa4.41□□□□□ -1.7
SHPRH-205ENST00000433355 MNS1Q8NEH6 495 aa4.41□□□□□ -1.7
SHPRH-205ENST00000433355 FGFR1OPO95684 399 aaKnown RBP4.4□□□□□ -1.7
SHPRH-205ENST00000433355 MRPL50Q8N5N7 158 aaKnown RBP4.4□□□□□ -1.7
SHPRH-205ENST00000433355 A0A1W2PQ27 194 aa4.4□□□□□ -1.7
SHPRH-205ENST00000433355 A0A1W2PQ64 194 aa4.4□□□□□ -1.7
SHPRH-205ENST00000433355 A0A1W2PQD8 194 aa4.4□□□□□ -1.7
SHPRH-205ENST00000433355 BECN2A8MW95 431 aa4.4□□□□□ -1.7
SHPRH-205ENST00000433355 H3BQV1 296 aa4.4□□□□□ -1.7
SHPRH-205ENST00000433355 DYNC1I1O14576 645 aa4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms