RNA–Protein interactions for RNA: ENST00000432877.5

CNOT9-204, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 3

Gene CNOT9, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-204ENST00000432877 VEGFBP49765 207 aa23.18■■□□□ 1.3
CNOT9-204ENST00000432877 TTLL7Q6ZT98 887 aa23.18■■□□□ 1.3
CNOT9-204ENST00000432877 ZNF34Q8IZ26 560 aa23.18■■□□□ 1.3
CNOT9-204ENST00000432877 AIDAQ96BJ3 306 aa23.18■■□□□ 1.3
CNOT9-204ENST00000432877 RIC1Q4ADV7 1423 aa23.17■■□□□ 1.3
CNOT9-204ENST00000432877 RNF123Q5XPI4 1314 aa23.17■■□□□ 1.3
CNOT9-204ENST00000432877 PPP1R42Q7Z4L9 355 aa23.17■■□□□ 1.3
CNOT9-204ENST00000432877 MYL6BP14649 208 aa23.16■■□□□ 1.3
CNOT9-204ENST00000432877 CTCFP49711 727 aaPredicted RBP23.16■■□□□ 1.3
CNOT9-204ENST00000432877 SUSD4Q5VX71 490 aa23.16■■□□□ 1.3
CNOT9-204ENST00000432877 GIGYF2Q6Y7W6 1299 aaKnown RBP23.16■■□□□ 1.3
CNOT9-204ENST00000432877 VPS33BQ9H267 617 aa23.16■■□□□ 1.3
CNOT9-204ENST00000432877 SNED1Q8TER0 1413 aa23.16■■□□□ 1.3
CNOT9-204ENST00000432877 ABCC12Q96J65 1359 aa23.15■■□□□ 1.3
CNOT9-204ENST00000432877 RASSF10A6NK89 507 aa23.15■■□□□ 1.3
CNOT9-204ENST00000432877 FOXN1O15353 648 aa23.15■■□□□ 1.3
CNOT9-204ENST00000432877 LMOD1P29536 600 aaPredicted RBP23.15■■□□□ 1.3
CNOT9-204ENST00000432877 DEFB115Q30KQ5 88 aa23.15■■□□□ 1.3
CNOT9-204ENST00000432877 PARP10Q53GL7 1025 aa23.15■■□□□ 1.3
CNOT9-204ENST00000432877 TMX4Q9H1E5 349 aaPredicted RBP23.15■■□□□ 1.3
CNOT9-204ENST00000432877 GPTP24298 496 aa23.14■■□□□ 1.29
CNOT9-204ENST00000432877 MAP1SQ66K74 1059 aaPredicted RBP23.14■■□□□ 1.29
CNOT9-204ENST00000432877 LARGE2Q8N3Y3 721 aa23.14■■□□□ 1.29
CNOT9-204ENST00000432877 NLRP3Q96P20 1036 aa23.14■■□□□ 1.29
CNOT9-204ENST00000432877 ZBTB3Q9H5J0 574 aa23.14■■□□□ 1.29
CNOT9-204ENST00000432877 BABAM1Q9NWV8 329 aa23.14■■□□□ 1.29
CNOT9-204ENST00000432877 WBP1LQ9NX94 342 aa23.14■■□□□ 1.29
CNOT9-204ENST00000432877 UBN2Q6ZU65 1347 aa23.13■■□□□ 1.29
CNOT9-204ENST00000432877 MAPK8IP3Q9UPT6 1336 aa23.13■■□□□ 1.29
CNOT9-204ENST00000432877 GJA3Q9Y6H8 435 aa23.13■■□□□ 1.29
CNOT9-204ENST00000432877 NTSR2O95665 410 aa23.12■■□□□ 1.29
CNOT9-204ENST00000432877 SLC10A5Q5PT55 438 aa23.12■■□□□ 1.29
CNOT9-204ENST00000432877 PPEF1O14829 653 aaPredicted RBP23.11■■□□□ 1.29
CNOT9-204ENST00000432877 USP50Q70EL3 339 aaPredicted RBP23.11■■□□□ 1.29
CNOT9-204ENST00000432877 THUMPD2Q9BTF0 503 aaKnown RBP23.11■■□□□ 1.29
CNOT9-204ENST00000432877 CACNA1SQ13698 1873 aa23.11■■□□□ 1.29
CNOT9-204ENST00000432877 MAP2K1Q02750 393 aaPredicted RBP23.1■■□□□ 1.29
CNOT9-204ENST00000432877 NIM1KQ8IY84 436 aa23.1■■□□□ 1.29
CNOT9-204ENST00000432877 UTP14AQ9BVJ6 771 aaKnown RBP23.1■■□□□ 1.29
CNOT9-204ENST00000432877 DDX21Q9NR30 783 aaKnown RBP eCLIP23.1■■□□□ 1.29
CNOT9-204ENST00000432877 TSPYL4Q9UJ04 414 aa23.1■■□□□ 1.29
CNOT9-204ENST00000432877 SUPT20HQ8NEM7 779 aa23.09■■□□□ 1.29
CNOT9-204ENST00000432877 ATP6V0A2Q9Y487 856 aa23.09■■□□□ 1.29
CNOT9-204ENST00000432877 SCNN1DP51172 638 aa23.08■■□□□ 1.29
CNOT9-204ENST00000432877 ABT1Q9ULW3 272 aaKnown RBP23.08■■□□□ 1.29
CNOT9-204ENST00000432877 WDR33Q9C0J8 1336 aaKnown RBP23.08■■□□□ 1.28
CNOT9-204ENST00000432877 LAMB4A4D0S4 1761 aa23.07■■□□□ 1.28
CNOT9-204ENST00000432877 ADAMTSL1Q8N6G6 1762 aa23.07■■□□□ 1.28
CNOT9-204ENST00000432877 BBOX1O75936 387 aa23.07■■□□□ 1.28
CNOT9-204ENST00000432877 EPS15P42566 896 aa23.07■■□□□ 1.28
CNOT9-204ENST00000432877 HSP90AB3PQ58FF7 597 aa23.07■■□□□ 1.28
CNOT9-204ENST00000432877 LRP10Q7Z4F1 713 aa23.07■■□□□ 1.28
CNOT9-204ENST00000432877 PPIP5K2O43314 1243 aa23.06■■□□□ 1.28
CNOT9-204ENST00000432877 PDIA6Q15084 440 aa23.06■■□□□ 1.28
CNOT9-204ENST00000432877 RTFDC1Q9BY42 306 aaPredicted RBP23.06■■□□□ 1.28
CNOT9-204ENST00000432877 EIF2S2P20042 333 aaKnown RBP23.05■■□□□ 1.28
CNOT9-204ENST00000432877 ECE1P42892 770 aa23.05■■□□□ 1.28
CNOT9-204ENST00000432877 RIPK4P57078 832 aa23.05■■□□□ 1.28
CNOT9-204ENST00000432877 LMOD3Q0VAK6 560 aa23.05■■□□□ 1.28
CNOT9-204ENST00000432877 KDM3BQ7LBC6 1761 aa23.04■■□□□ 1.28
CNOT9-204ENST00000432877 TCERG1O14776 1098 aaKnown RBP23.04■■□□□ 1.28
CNOT9-204ENST00000432877 LBX1P52954 281 aa23.04■■□□□ 1.28
CNOT9-204ENST00000432877 C3orf67Q6ZVT6 689 aa23.04■■□□□ 1.28
CNOT9-204ENST00000432877 SP8Q8IXZ3 490 aa23.04■■□□□ 1.28
CNOT9-204ENST00000432877 ADARB2Q9NS39 739 aaKnown RBP23.04■■□□□ 1.28
CNOT9-204ENST00000432877 ZNRF3Q9ULT6 936 aa23.04■■□□□ 1.28
CNOT9-204ENST00000432877 GPRC5DQ9NZD1 345 aa23.02■■□□□ 1.28
CNOT9-204ENST00000432877 NUP98P52948 1817 aa23.02■■□□□ 1.28
CNOT9-204ENST00000432877 CXCL9Q07325 125 aa23.01■■□□□ 1.27
CNOT9-204ENST00000432877 RALBP1Q15311 655 aa23.01■■□□□ 1.27
CNOT9-204ENST00000432877 AOC3Q16853 763 aa23.01■■□□□ 1.27
CNOT9-204ENST00000432877 COPS6Q7L5N1 327 aa23.01■■□□□ 1.27
CNOT9-204ENST00000432877 ABCC4O15439 1325 aa23.01■■□□□ 1.27
CNOT9-204ENST00000432877 COL4A5P29400 1685 aa23■■□□□ 1.27
CNOT9-204ENST00000432877 HSPA8P11142 646 aaKnown RBP23■■□□□ 1.27
CNOT9-204ENST00000432877 DPP8Q6V1X1 898 aaPredicted RBP23■■□□□ 1.27
CNOT9-204ENST00000432877 TMC4Q7Z404 712 aa23■■□□□ 1.27
CNOT9-204ENST00000432877 NLRP10Q86W26 655 aa23■■□□□ 1.27
CNOT9-204ENST00000432877 MPNDQ8N594 471 aa23■■□□□ 1.27
CNOT9-204ENST00000432877 BEGAINQ9BUH8 593 aa23■■□□□ 1.27
CNOT9-204ENST00000432877 TMPOP42166 694 aaKnown RBP22.99■■□□□ 1.27
CNOT9-204ENST00000432877 TCIRG1Q13488 830 aa22.99■■□□□ 1.27
CNOT9-204ENST00000432877 PROSER3Q2NL68 480 aa22.99■■□□□ 1.27
CNOT9-204ENST00000432877 CST9Q5W186 159 aa22.99■■□□□ 1.27
CNOT9-204ENST00000432877 DDX46Q7L014 1031 aaKnown RBP22.99■■□□□ 1.27
CNOT9-204ENST00000432877 CAPNS2Q96L46 248 aa22.99■■□□□ 1.27
CNOT9-204ENST00000432877 CDHR2Q9BYE9 1310 aa22.99■■□□□ 1.27
CNOT9-204ENST00000432877 KIAA2012Q0VF49 1180 aa22.98■■□□□ 1.27
CNOT9-204ENST00000432877 TNIP1Q15025 636 aa22.98■■□□□ 1.27
CNOT9-204ENST00000432877 ZC3H15Q8WU90 426 aaKnown RBP22.98■■□□□ 1.27
CNOT9-204ENST00000432877 GPR101Q96P66 508 aaPredicted RBP22.98■■□□□ 1.27
CNOT9-204ENST00000432877 PGAP2Q9UHJ9 254 aa22.98■■□□□ 1.27
CNOT9-204ENST00000432877 TRMT112Q9UI30 125 aaKnown RBP22.98■■□□□ 1.27
CNOT9-204ENST00000432877 TLL2Q9Y6L7 1015 aa22.98■■□□□ 1.27
CNOT9-204ENST00000432877 MAP2K2P36507 400 aa22.97■■□□□ 1.27
CNOT9-204ENST00000432877 CIAPIN1Q6FI81 312 aa22.97■■□□□ 1.27
CNOT9-204ENST00000432877 XAGE3Q8WTP9 111 aa22.97■■□□□ 1.27
CNOT9-204ENST00000432877 SH3TC1Q8TE82 1336 aa22.97■■□□□ 1.27
CNOT9-204ENST00000432877 DLG5Q8TDM6 1919 aa22.96■■□□□ 1.27
CNOT9-204ENST00000432877 ANXA1P04083 346 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms