RNA–Protein interactions for RNA: ENST00000432725.1

SF1-208, Transcript of splicing factor 1, humanhuman

TSL 4

Gene SF1, Length 475 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-208ENST00000432725 ZNF219Q9P2Y4 722 aaPredicted RBP20.09■□□□□ 0.81
SF1-208ENST00000432725 CRY2Q49AN0 593 aa20.08■□□□□ 0.81
SF1-208ENST00000432725 TOMM70O94826 608 aa20.07■□□□□ 0.8
SF1-208ENST00000432725 ANXA1P04083 346 aa20.07■□□□□ 0.8
SF1-208ENST00000432725 GPTP24298 496 aa20.07■□□□□ 0.8
SF1-208ENST00000432725 ERFEQ4G0M1 354 aa20.07■□□□□ 0.8
SF1-208ENST00000432725 SUSD4Q5VX71 490 aa20.07■□□□□ 0.8
SF1-208ENST00000432725 DDX21Q9NR30 783 aaKnown RBP eCLIP20.07■□□□□ 0.8
SF1-208ENST00000432725 RIC1Q4ADV7 1423 aa20.07■□□□□ 0.8
SF1-208ENST00000432725 SBF1O95248 1867 aa20.07■□□□□ 0.8
SF1-208ENST00000432725 PARP10Q53GL7 1025 aa20.06■□□□□ 0.8
SF1-208ENST00000432725 COPS6Q7L5N1 327 aa20.06■□□□□ 0.8
SF1-208ENST00000432725 NUTM1Q86Y26 1132 aa20.06■□□□□ 0.8
SF1-208ENST00000432725 NECTIN2Q92692 538 aa20.06■□□□□ 0.8
SF1-208ENST00000432725 TAOK3Q9H2K8 898 aa20.06■□□□□ 0.8
SF1-208ENST00000432725 MBIPQ9NS73 344 aa20.06■□□□□ 0.8
SF1-208ENST00000432725 ABCC12Q96J65 1359 aa20.06■□□□□ 0.8
SF1-208ENST00000432725 NTSR2O95665 410 aa20.05■□□□□ 0.8
SF1-208ENST00000432725 ALDH1B1P30837 517 aa20.05■□□□□ 0.8
SF1-208ENST00000432725 RARSP54136 660 aaKnown RBP20.05■□□□□ 0.8
SF1-208ENST00000432725 XAGE3Q8WTP9 111 aa20.05■□□□□ 0.8
SF1-208ENST00000432725 NUP98P52948 1817 aa20.04■□□□□ 0.8
SF1-208ENST00000432725 SLX4Q8IY92 1834 aa20.04■□□□□ 0.8
SF1-208ENST00000432725 GLTPD2A6NH11 291 aa20.04■□□□□ 0.8
SF1-208ENST00000432725 HSPA6P17066 643 aa20.04■□□□□ 0.8
SF1-208ENST00000432725 IRX6P78412 446 aaPredicted RBP20.04■□□□□ 0.8
SF1-208ENST00000432725 PDE3AQ14432 1141 aa20.04■□□□□ 0.8
SF1-208ENST00000432725 HDGFL1Q5TGJ6 251 aa20.04■□□□□ 0.8
SF1-208ENST00000432725 PPP1R42Q7Z4L9 355 aa20.04■□□□□ 0.8
SF1-208ENST00000432725 ARFGEF2Q9Y6D5 1785 aa20.03■□□□□ 0.8
SF1-208ENST00000432725 MS4A1P11836 297 aa20.03■□□□□ 0.8
SF1-208ENST00000432725 HOXA10P31260 410 aaPredicted RBP20.03■□□□□ 0.8
SF1-208ENST00000432725 EXOSC9Q06265 439 aaKnown RBP20.03■□□□□ 0.8
SF1-208ENST00000432725 ALDH1L2Q3SY69 923 aa20.03■□□□□ 0.8
SF1-208ENST00000432725 CCDC93Q567U6 631 aa20.03■□□□□ 0.8
SF1-208ENST00000432725 HSP90AB3PQ58FF7 597 aa20.03■□□□□ 0.8
SF1-208ENST00000432725 RRAGCQ9HB90 399 aa20.03■□□□□ 0.8
SF1-208ENST00000432725 CHPF2Q9P2E5 772 aa20.03■□□□□ 0.8
SF1-208ENST00000432725 AIMP1Q12904 312 aaKnown RBP20.02■□□□□ 0.8
SF1-208ENST00000432725 RBM46Q8TBY0 533 aaKnown RBP20.02■□□□□ 0.8
SF1-208ENST00000432725 TSR2Q969E8 191 aaKnown RBP20.02■□□□□ 0.8
SF1-208ENST00000432725 DBF4Q9UBU7 674 aaPredicted RBP20.02■□□□□ 0.8
SF1-208ENST00000432725 FER1L6Q2WGJ9 1857 aa20.02■□□□□ 0.8
SF1-208ENST00000432725 TNRC6CQ9HCJ0 1690 aaKnown RBP20.01■□□□□ 0.79
SF1-208ENST00000432725 BRPF1P55201 1214 aaPredicted RBP20.01■□□□□ 0.79
SF1-208ENST00000432725 SLC10A5Q5PT55 438 aa20.01■□□□□ 0.79
SF1-208ENST00000432725 UTP14AQ9BVJ6 771 aaKnown RBP20.01■□□□□ 0.79
SF1-208ENST00000432725 TCIRG1Q13488 830 aa20■□□□□ 0.79
SF1-208ENST00000432725 AAMPQ13685 434 aa20■□□□□ 0.79
SF1-208ENST00000432725 C16orf71Q8IYS4 520 aaPredicted RBP20■□□□□ 0.79
SF1-208ENST00000432725 RTKN2Q8IZC4 609 aa20■□□□□ 0.79
SF1-208ENST00000432725 FKBP4Q02790 459 aaKnown RBP eCLIP19.99■□□□□ 0.79
SF1-208ENST00000432725 DPY19L2Q6NUT2 758 aa19.99■□□□□ 0.79
SF1-208ENST00000432725 NLRP10Q86W26 655 aa19.99■□□□□ 0.79
SF1-208ENST00000432725 RPGRQ92834 1020 aaKnown RBP19.99■□□□□ 0.79
SF1-208ENST00000432725 HYPKQ9NX55 129 aa19.99■□□□□ 0.79
SF1-208ENST00000432725 VEGFAP15692 232 aaPredicted RBP19.98■□□□□ 0.79
SF1-208ENST00000432725 OLFM4Q6UX06 510 aa19.98■□□□□ 0.79
SF1-208ENST00000432725 C3orf67Q6ZVT6 689 aa19.98■□□□□ 0.79
SF1-208ENST00000432725 PLBD2Q8NHP8 589 aa19.98■□□□□ 0.79
SF1-208ENST00000432725 CRAMP1Q96RY5 1269 aa19.98■□□□□ 0.79
SF1-208ENST00000432725 TIAM2Q8IVF5 1701 aa19.97■□□□□ 0.79
SF1-208ENST00000432725 SNED1Q8TER0 1413 aa19.97■□□□□ 0.79
SF1-208ENST00000432725 BCAR3O75815 825 aa19.97■□□□□ 0.79
SF1-208ENST00000432725 FSTL1Q12841 308 aa19.97■□□□□ 0.79
SF1-208ENST00000432725 CC2D2BQ6DHV5 1058 aa19.97■□□□□ 0.79
SF1-208ENST00000432725 ANKRD13DQ6ZTN6 518 aa19.97■□□□□ 0.79
SF1-208ENST00000432725 RBM17Q96I25 401 aaKnown RBP19.97■□□□□ 0.79
SF1-208ENST00000432725 NLRP3Q96P20 1036 aa19.97■□□□□ 0.79
SF1-208ENST00000432725 KIF16BQ96L93 1317 aa19.97■□□□□ 0.79
SF1-208ENST00000432725 CEP350Q5VT06 3117 aa19.95■□□□□ 0.78
SF1-208ENST00000432725 POTECB2RU33 542 aa19.95■□□□□ 0.78
SF1-208ENST00000432725 IPO8O15397 1037 aaKnown RBP19.95■□□□□ 0.78
SF1-208ENST00000432725 PLIN1O60240 522 aa19.95■□□□□ 0.78
SF1-208ENST00000432725 GRIPAP1Q4V328 841 aa19.95■□□□□ 0.78
SF1-208ENST00000432725 C8orf58Q8NAV2 365 aa19.95■□□□□ 0.78
SF1-208ENST00000432725 PSMD1Q99460 953 aa19.95■□□□□ 0.78
SF1-208ENST00000432725 VAMP4O75379 141 aa19.94■□□□□ 0.78
SF1-208ENST00000432725 ISCA1Q9BUE6 129 aa19.94■□□□□ 0.78
SF1-208ENST00000432725 CHMP4AQ9BY43 222 aa19.94■□□□□ 0.78
SF1-208ENST00000432725 ZNF277Q9NRM2 450 aaPredicted RBP19.94■□□□□ 0.78
SF1-208ENST00000432725 SMC4Q9NTJ3 1288 aa19.94■□□□□ 0.78
SF1-208ENST00000432725 TRMT112Q9UI30 125 aaKnown RBP19.94■□□□□ 0.78
SF1-208ENST00000432725 CACNA1SQ13698 1873 aa19.94■□□□□ 0.78
SF1-208ENST00000432725 ELL2O00472 640 aaPredicted RBP19.93■□□□□ 0.78
SF1-208ENST00000432725 APLP1P51693 650 aa19.93■□□□□ 0.78
SF1-208ENST00000432725 TWISTNBQ3B726 338 aaPredicted RBP19.93■□□□□ 0.78
SF1-208ENST00000432725 ZKSCAN2Q63HK3 967 aa19.93■□□□□ 0.78
SF1-208ENST00000432725 SYNE4Q8N205 404 aa19.93■□□□□ 0.78
SF1-208ENST00000432725 SH3TC1Q8TE82 1336 aa19.93■□□□□ 0.78
SF1-208ENST00000432725 PPEF1O14829 653 aaPredicted RBP19.92■□□□□ 0.78
SF1-208ENST00000432725 TRIM28Q13263 835 aaKnown RBP19.92■□□□□ 0.78
SF1-208ENST00000432725 SMC1BQ8NDV3 1235 aa19.92■□□□□ 0.78
SF1-208ENST00000432725 EXOC6Q8TAG9 804 aa19.92■□□□□ 0.78
SF1-208ENST00000432725 SSH1Q8WYL5 1049 aa19.92■□□□□ 0.78
SF1-208ENST00000432725 WDR90Q96KV7 1748 aa19.92■□□□□ 0.78
SF1-208ENST00000432725 CCDC88AQ3V6T2 1871 aa19.92■□□□□ 0.78
SF1-208ENST00000432725 DICER1Q9UPY3 1922 aaKnown RBP19.92■□□□□ 0.78
SF1-208ENST00000432725 ANKRD36CQ5JPF3 1778 aa19.91■□□□□ 0.78
SF1-208ENST00000432725 DDNO94850 711 aaPredicted RBP19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms