RNA–Protein interactions for RNA: ENST00000432561.6

CHFR-203, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHFR, Length 2,648 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-203ENST00000432561 METTL22Q9BUU2 404 aaPredicted RBP20.03■□□□□ 0.8
CHFR-203ENST00000432561 ESPNB1AK53 854 aa20.03■□□□□ 0.8
CHFR-203ENST00000432561 EPB41L2O43491 1005 aaKnown RBP20.03■□□□□ 0.8
CHFR-203ENST00000432561 UBE3BQ7Z3V4 1068 aa20.03■□□□□ 0.8
CHFR-203ENST00000432561 RUFY2Q8WXA3 655 aa20.03■□□□□ 0.8
CHFR-203ENST00000432561 A0A0D9SFI3 127 aa20.02■□□□□ 0.8
CHFR-203ENST00000432561 CHGBP05060 677 aa20.02■□□□□ 0.79
CHFR-203ENST00000432561 SNRPA1P09661 255 aaKnown RBP20.02■□□□□ 0.79
CHFR-203ENST00000432561 LIMCH1Q9UPQ0 1083 aa20.02■□□□□ 0.79
CHFR-203ENST00000432561 HDAC5Q9UQL6 1122 aa20.02■□□□□ 0.79
CHFR-203ENST00000432561 CCDC9Q9Y3X0 531 aaKnown RBP20.02■□□□□ 0.79
CHFR-203ENST00000432561 CCDC83Q8IWF9 413 aa20.01■□□□□ 0.79
CHFR-203ENST00000432561 TCEANC2Q96MN5 208 aa20.01■□□□□ 0.79
CHFR-203ENST00000432561 TAF6LQ9Y6J9 622 aa20.01■□□□□ 0.79
CHFR-203ENST00000432561 CCDC171Q6TFL3 1326 aa20.01■□□□□ 0.79
CHFR-203ENST00000432561 KCNJ4P48050 445 aa20.01■□□□□ 0.79
CHFR-203ENST00000432561 FSD1Q9BTV5 496 aa20.01■□□□□ 0.79
CHFR-203ENST00000432561 RBM8AQ9Y5S9 174 aaKnown RBP20.01■□□□□ 0.79
CHFR-203ENST00000432561 AFDNP55196 1824 aaKnown RBP20■□□□□ 0.79
CHFR-203ENST00000432561 CABP4P57796 275 aa20■□□□□ 0.79
CHFR-203ENST00000432561 DCAF5Q96JK2 942 aa20■□□□□ 0.79
CHFR-203ENST00000432561 WDR33Q9C0J8 1336 aaKnown RBP19.99■□□□□ 0.79
CHFR-203ENST00000432561 CLCN1P35523 988 aa19.99■□□□□ 0.79
CHFR-203ENST00000432561 USP48Q86UV5 1035 aa19.99■□□□□ 0.79
CHFR-203ENST00000432561 RNF214Q8ND24 703 aa19.99■□□□□ 0.79
CHFR-203ENST00000432561 PDRG1Q9NUG6 133 aa19.99■□□□□ 0.79
CHFR-203ENST00000432561 NECTIN1Q15223 517 aa19.99■□□□□ 0.79
CHFR-203ENST00000432561 FMNL2Q96PY5 1086 aa19.99■□□□□ 0.79
CHFR-203ENST00000432561 CNPY2Q9Y2B0 182 aa19.99■□□□□ 0.79
CHFR-203ENST00000432561 SYT1P21579 422 aa19.98■□□□□ 0.79
CHFR-203ENST00000432561 CCDC173Q0VFZ6 552 aa19.98■□□□□ 0.79
CHFR-203ENST00000432561 ZNF589Q86UQ0 364 aaPredicted RBP19.98■□□□□ 0.79
CHFR-203ENST00000432561 NECAB1Q8N987 351 aa19.98■□□□□ 0.79
CHFR-203ENST00000432561 TNS3Q68CZ2 1445 aa19.98■□□□□ 0.79
CHFR-203ENST00000432561 TFCP2Q12800 502 aa19.98■□□□□ 0.79
CHFR-203ENST00000432561 CREB3L3Q68CJ9 461 aa19.98■□□□□ 0.79
CHFR-203ENST00000432561 A0A087WZG4 1122 aa19.97■□□□□ 0.79
CHFR-203ENST00000432561 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.97■□□□□ 0.79
CHFR-203ENST00000432561 DBNLQ9UJU6 430 aaKnown RBP19.97■□□□□ 0.79
CHFR-203ENST00000432561 SMC3Q9UQE7 1217 aa19.97■□□□□ 0.79
CHFR-203ENST00000432561 PTPN12Q05209 780 aaKnown RBP19.97■□□□□ 0.79
CHFR-203ENST00000432561 ST3GAL1Q11201 340 aa19.97■□□□□ 0.79
CHFR-203ENST00000432561 LRSAM1Q6UWE0 723 aa19.97■□□□□ 0.79
CHFR-203ENST00000432561 ANP32BQ92688 251 aaKnown RBP19.97■□□□□ 0.79
CHFR-203ENST00000432561 PPP1R9BQ96SB3 815 aa19.97■□□□□ 0.79
CHFR-203ENST00000432561 LMTK3Q96Q04 1460 aa19.96■□□□□ 0.79
CHFR-203ENST00000432561 CYP46A1Q9Y6A2 500 aa19.96■□□□□ 0.79
CHFR-203ENST00000432561 STX6O43752 255 aa19.96■□□□□ 0.79
CHFR-203ENST00000432561 MBD3O95983 291 aa19.96■□□□□ 0.79
CHFR-203ENST00000432561 RFX5P48382 616 aaPredicted RBP19.96■□□□□ 0.79
CHFR-203ENST00000432561 ZSWIM6Q9HCJ5 1215 aa19.96■□□□□ 0.79
CHFR-203ENST00000432561 SPATA31A3Q5VYP0 1347 aa19.96■□□□□ 0.79
CHFR-203ENST00000432561 ARFGEF2Q9Y6D5 1785 aa19.95■□□□□ 0.78
CHFR-203ENST00000432561 GJB2P29033 226 aa19.95■□□□□ 0.78
CHFR-203ENST00000432561 ME3Q16798 604 aa19.95■□□□□ 0.78
CHFR-203ENST00000432561 CHMP3Q9Y3E7 222 aa19.95■□□□□ 0.78
CHFR-203ENST00000432561 ZSCAN22P10073 491 aaPredicted RBP19.95■□□□□ 0.78
CHFR-203ENST00000432561 CADPS2Q86UW7 1296 aa19.95■□□□□ 0.78
CHFR-203ENST00000432561 MAP4K1Q92918 833 aa19.95■□□□□ 0.78
CHFR-203ENST00000432561 NBPF26B4DH59 902 aa19.94■□□□□ 0.78
CHFR-203ENST00000432561 SLC27A2O14975 620 aa19.94■□□□□ 0.78
CHFR-203ENST00000432561 ZKSCAN1P17029 563 aaPredicted RBP19.94■□□□□ 0.78
CHFR-203ENST00000432561 NBPF14Q5TI25 921 aa19.94■□□□□ 0.78
CHFR-203ENST00000432561 NBPF10Q6P3W6 841 aaKnown RBP19.94■□□□□ 0.78
CHFR-203ENST00000432561 NBPF15Q8N660 670 aa19.94■□□□□ 0.78
CHFR-203ENST00000432561 VPS53Q5VIR6 699 aa19.94■□□□□ 0.78
CHFR-203ENST00000432561 TTLL7Q6ZT98 887 aa19.94■□□□□ 0.78
CHFR-203ENST00000432561 DNAJC2Q99543 621 aaKnown RBP19.94■□□□□ 0.78
CHFR-203ENST00000432561 TPCN1Q9ULQ1 816 aa19.94■□□□□ 0.78
CHFR-203ENST00000432561 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.94■□□□□ 0.78
CHFR-203ENST00000432561 TNNI3KQ59H18 835 aa19.93■□□□□ 0.78
CHFR-203ENST00000432561 DBNDD2Q9BQY9 259 aa19.93■□□□□ 0.78
CHFR-203ENST00000432561 FPGT-TNNI3KV9GXZ4 949 aa19.93■□□□□ 0.78
CHFR-203ENST00000432561 FIBPO43427 364 aa19.93■□□□□ 0.78
CHFR-203ENST00000432561 COPRSQ9NQ92 184 aa19.93■□□□□ 0.78
CHFR-203ENST00000432561 MRC1P22897 1456 aa19.93■□□□□ 0.78
CHFR-203ENST00000432561 LMBR1LQ6UX01 489 aa19.92■□□□□ 0.78
CHFR-203ENST00000432561 CCDC129Q6ZRS4 1044 aa19.92■□□□□ 0.78
CHFR-203ENST00000432561 TOM1L2Q6ZVM7 507 aa19.92■□□□□ 0.78
CHFR-203ENST00000432561 SEC62Q99442 399 aaKnown RBP19.92■□□□□ 0.78
CHFR-203ENST00000432561 PKD1L3Q7Z443 1732 aa19.92■□□□□ 0.78
CHFR-203ENST00000432561 A1BGP04217 495 aa19.92■□□□□ 0.78
CHFR-203ENST00000432561 KCNB2Q92953 911 aa19.92■□□□□ 0.78
CHFR-203ENST00000432561 PRDM11Q9NQV5 511 aa19.92■□□□□ 0.78
CHFR-203ENST00000432561 F13A1P00488 732 aa19.91■□□□□ 0.78
CHFR-203ENST00000432561 SLFNL1Q499Z3 407 aa19.91■□□□□ 0.78
CHFR-203ENST00000432561 NAP1L5Q96NT1 182 aaPredicted RBP19.91■□□□□ 0.78
CHFR-203ENST00000432561 COL15A1P39059 1388 aa19.91■□□□□ 0.78
CHFR-203ENST00000432561 GLI3P10071 1580 aa19.91■□□□□ 0.78
CHFR-203ENST00000432561 VPS37CA5D8V6 355 aaPredicted RBP19.91■□□□□ 0.78
CHFR-203ENST00000432561 DDX46Q7L014 1031 aaKnown RBP19.9■□□□□ 0.78
CHFR-203ENST00000432561 ZBTB3Q9H5J0 574 aa19.9■□□□□ 0.78
CHFR-203ENST00000432561 MED23Q9ULK4 1368 aa19.9■□□□□ 0.78
CHFR-203ENST00000432561 HIP1O00291 1037 aa19.9■□□□□ 0.78
CHFR-203ENST00000432561 BRINP3Q76B58 766 aa19.9■□□□□ 0.78
CHFR-203ENST00000432561 TM6SF1Q9BZW5 370 aa19.9■□□□□ 0.78
CHFR-203ENST00000432561 CASP7P55210 303 aa19.89■□□□□ 0.78
CHFR-203ENST00000432561 RABL6Q3YEC7 729 aaPredicted RBP19.89■□□□□ 0.78
CHFR-203ENST00000432561 PLBD2Q8NHP8 589 aa19.89■□□□□ 0.78
CHFR-203ENST00000432561 DNM1Q05193 864 aaKnown RBP19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms