RNA–Protein interactions for RNA: ENST00000431803.2

CDC42-IT1-201, CDC42 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDC42-IT1, Length 692 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-IT1-201ENST00000431803 LAMB4A4D0S4 1761 aa12.5□□□□□ -0.41
CDC42-IT1-201ENST00000431803 KDM3BQ7LBC6 1761 aa12.5□□□□□ -0.41
CDC42-IT1-201ENST00000431803 DLG5Q8TDM6 1919 aa12.5□□□□□ -0.41
CDC42-IT1-201ENST00000431803 TNRC6CQ9HCJ0 1690 aaKnown RBP12.49□□□□□ -0.41
CDC42-IT1-201ENST00000431803 KDM2BQ8NHM5 1336 aa12.49□□□□□ -0.41
CDC42-IT1-201ENST00000431803 NBPF26B4DH59 902 aa12.49□□□□□ -0.41
CDC42-IT1-201ENST00000431803 NFKBIEO00221 500 aa12.49□□□□□ -0.41
CDC42-IT1-201ENST00000431803 LMNB1P20700 586 aa12.49□□□□□ -0.41
CDC42-IT1-201ENST00000431803 DPY19L2Q6NUT2 758 aa12.49□□□□□ -0.41
CDC42-IT1-201ENST00000431803 NBPF10Q6P3W6 841 aaKnown RBP12.49□□□□□ -0.41
CDC42-IT1-201ENST00000431803 CLEC4GQ6UXB4 293 aa12.49□□□□□ -0.41
CDC42-IT1-201ENST00000431803 NBPF15Q8N660 670 aa12.49□□□□□ -0.41
CDC42-IT1-201ENST00000431803 CNBD1Q8NA66 436 aa12.49□□□□□ -0.41
CDC42-IT1-201ENST00000431803 SETDB2Q96T68 719 aa12.49□□□□□ -0.41
CDC42-IT1-201ENST00000431803 CCDC24Q8N4L8 307 aa12.48□□□□□ -0.41
CDC42-IT1-201ENST00000431803 L3MBTL3Q96JM7 780 aaPredicted RBP12.48□□□□□ -0.41
CDC42-IT1-201ENST00000431803 TIAM2Q8IVF5 1701 aa12.48□□□□□ -0.41
CDC42-IT1-201ENST00000431803 NEFMP07197 916 aa12.47□□□□□ -0.41
CDC42-IT1-201ENST00000431803 NFE2L2Q16236 605 aa12.47□□□□□ -0.41
CDC42-IT1-201ENST00000431803 RBM46Q8TBY0 533 aaKnown RBP12.47□□□□□ -0.41
CDC42-IT1-201ENST00000431803 MIS18AQ9NYP9 233 aa12.47□□□□□ -0.41
CDC42-IT1-201ENST00000431803 ZNF652Q9Y2D9 606 aa12.47□□□□□ -0.41
CDC42-IT1-201ENST00000431803 FER1L6Q2WGJ9 1857 aa12.46□□□□□ -0.41
CDC42-IT1-201ENST00000431803 ARFGEF2Q9Y6D5 1785 aa12.46□□□□□ -0.41
CDC42-IT1-201ENST00000431803 SRGNP10124 158 aa12.46□□□□□ -0.41
CDC42-IT1-201ENST00000431803 APLP1P51693 650 aa12.46□□□□□ -0.41
CDC42-IT1-201ENST00000431803 ST5P78524 1137 aa12.46□□□□□ -0.41
CDC42-IT1-201ENST00000431803 PNISRQ8TF01 805 aaKnown RBP12.46□□□□□ -0.41
CDC42-IT1-201ENST00000431803 ZNF622Q969S3 477 aaKnown RBP eCLIP12.46□□□□□ -0.41
CDC42-IT1-201ENST00000431803 LTBP3Q9NS15 1303 aa12.45□□□□□ -0.42
CDC42-IT1-201ENST00000431803 STYK1Q6J9G0 422 aa12.45□□□□□ -0.42
CDC42-IT1-201ENST00000431803 NBPF5PQ86XG9 351 aaPredicted RBP12.45□□□□□ -0.42
CDC42-IT1-201ENST00000431803 THUMPD2Q9BTF0 503 aaKnown RBP12.45□□□□□ -0.42
CDC42-IT1-201ENST00000431803 PCNTO95613 3336 aa12.45□□□□□ -0.42
CDC42-IT1-201ENST00000431803 SLX4Q8IY92 1834 aa12.44□□□□□ -0.42
CDC42-IT1-201ENST00000431803 KLRG2A4D1S0 409 aaPredicted RBP12.44□□□□□ -0.42
CDC42-IT1-201ENST00000431803 GLTPD2A6NH11 291 aa12.44□□□□□ -0.42
CDC42-IT1-201ENST00000431803 NPHP1O15259 732 aa12.44□□□□□ -0.42
CDC42-IT1-201ENST00000431803 C21orf2O43822 256 aa12.44□□□□□ -0.42
CDC42-IT1-201ENST00000431803 EIF4A1P60842 406 aaKnown RBP12.44□□□□□ -0.42
CDC42-IT1-201ENST00000431803 FSTL1Q12841 308 aa12.44□□□□□ -0.42
CDC42-IT1-201ENST00000431803 RALBP1Q15311 655 aa12.44□□□□□ -0.42
CDC42-IT1-201ENST00000431803 PRPF40BQ6NWY9 871 aaKnown RBP12.44□□□□□ -0.42
CDC42-IT1-201ENST00000431803 C16orf71Q8IYS4 520 aaPredicted RBP12.44□□□□□ -0.42
CDC42-IT1-201ENST00000431803 SLAIN1Q8ND83 568 aa12.44□□□□□ -0.42
CDC42-IT1-201ENST00000431803 CNKSR1Q969H4 720 aa12.44□□□□□ -0.42
CDC42-IT1-201ENST00000431803 PNNQ9H307 717 aaKnown RBP12.44□□□□□ -0.42
CDC42-IT1-201ENST00000431803 RRAGCQ9HB90 399 aa12.44□□□□□ -0.42
CDC42-IT1-201ENST00000431803 CCDC88AQ3V6T2 1871 aa12.44□□□□□ -0.42
CDC42-IT1-201ENST00000431803 MAPK8IP3Q9UPT6 1336 aa12.43□□□□□ -0.42
CDC42-IT1-201ENST00000431803 HLFQ16534 295 aa12.43□□□□□ -0.42
CDC42-IT1-201ENST00000431803 MASTLQ96GX5 879 aa12.43□□□□□ -0.42
CDC42-IT1-201ENST00000431803 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.43□□□□□ -0.42
CDC42-IT1-201ENST00000431803 NIP7Q9Y221 180 aaKnown RBP eCLIP12.43□□□□□ -0.42
CDC42-IT1-201ENST00000431803 DICER1Q9UPY3 1922 aaKnown RBP12.43□□□□□ -0.42
CDC42-IT1-201ENST00000431803 WDR90Q96KV7 1748 aa12.42□□□□□ -0.42
CDC42-IT1-201ENST00000431803 TPTE2Q6XPS3 522 aa12.42□□□□□ -0.42
CDC42-IT1-201ENST00000431803 C3orf67Q6ZVT6 689 aa12.42□□□□□ -0.42
CDC42-IT1-201ENST00000431803 DNAJC5GQ8N7S2 189 aa12.42□□□□□ -0.42
CDC42-IT1-201ENST00000431803 C7orf43Q8WVR3 580 aa12.42□□□□□ -0.42
CDC42-IT1-201ENST00000431803 TAOK3Q9H2K8 898 aa12.42□□□□□ -0.42
CDC42-IT1-201ENST00000431803 CACNA1SQ13698 1873 aa12.42□□□□□ -0.42
CDC42-IT1-201ENST00000431803 ERVV-1B6SEH8 477 aa12.41□□□□□ -0.42
CDC42-IT1-201ENST00000431803 G3V3G9 751 aa12.41□□□□□ -0.42
CDC42-IT1-201ENST00000431803 NPR1P16066 1061 aa12.41□□□□□ -0.42
CDC42-IT1-201ENST00000431803 SOGA3Q5TF21 947 aa12.41□□□□□ -0.42
CDC42-IT1-201ENST00000431803 BOLA1Q9Y3E2 137 aa12.41□□□□□ -0.42
CDC42-IT1-201ENST00000431803 ERBB4Q15303 1308 aa12.4□□□□□ -0.42
CDC42-IT1-201ENST00000431803 MAP3K15Q6ZN16 1313 aa12.4□□□□□ -0.42
CDC42-IT1-201ENST00000431803 NUP98P52948 1817 aa12.4□□□□□ -0.42
CDC42-IT1-201ENST00000431803 VEGFAP15692 232 aaPredicted RBP12.4□□□□□ -0.42
CDC42-IT1-201ENST00000431803 ERFEQ4G0M1 354 aa12.4□□□□□ -0.42
CDC42-IT1-201ENST00000431803 TTLL7Q6ZT98 887 aa12.4□□□□□ -0.42
CDC42-IT1-201ENST00000431803 SMC1BQ8NDV3 1235 aa12.4□□□□□ -0.42
CDC42-IT1-201ENST00000431803 ABCC12Q96J65 1359 aa12.4□□□□□ -0.42
CDC42-IT1-201ENST00000431803 IBTKQ9P2D0 1353 aaPredicted RBP12.4□□□□□ -0.42
CDC42-IT1-201ENST00000431803 MYBBP1AQ9BQG0 1328 aaKnown RBP12.39□□□□□ -0.43
CDC42-IT1-201ENST00000431803 RIC1Q4ADV7 1423 aa12.39□□□□□ -0.43
CDC42-IT1-201ENST00000431803 POTECB2RU33 542 aa12.39□□□□□ -0.43
CDC42-IT1-201ENST00000431803 RIPK4P57078 832 aa12.39□□□□□ -0.43
CDC42-IT1-201ENST00000431803 CRY2Q49AN0 593 aa12.39□□□□□ -0.43
CDC42-IT1-201ENST00000431803 LRP10Q7Z4F1 713 aa12.39□□□□□ -0.43
CDC42-IT1-201ENST00000431803 MS4A4AQ96JQ5 239 aa12.39□□□□□ -0.43
CDC42-IT1-201ENST00000431803 BABAM1Q9NWV8 329 aa12.39□□□□□ -0.43
CDC42-IT1-201ENST00000431803 TSPYL4Q9UJ04 414 aa12.39□□□□□ -0.43
CDC42-IT1-201ENST00000431803 UBN2Q6ZU65 1347 aa12.38□□□□□ -0.43
CDC42-IT1-201ENST00000431803 SNED1Q8TER0 1413 aa12.38□□□□□ -0.43
CDC42-IT1-201ENST00000431803 MYL6BP14649 208 aa12.38□□□□□ -0.43
CDC42-IT1-201ENST00000431803 TMPOP42166 694 aaKnown RBP12.38□□□□□ -0.43
CDC42-IT1-201ENST00000431803 DDX10Q13206 875 aaKnown RBP12.38□□□□□ -0.43
CDC42-IT1-201ENST00000431803 CCDC93Q567U6 631 aa12.38□□□□□ -0.43
CDC42-IT1-201ENST00000431803 KIF6Q6ZMV9 814 aa12.38□□□□□ -0.43
CDC42-IT1-201ENST00000431803 NGEFQ8N5V2 710 aa12.38□□□□□ -0.43
CDC42-IT1-201ENST00000431803 RRP7AQ9Y3A4 280 aaKnown RBP12.38□□□□□ -0.43
CDC42-IT1-201ENST00000431803 FAM177BA6PVY3 158 aa12.37□□□□□ -0.43
CDC42-IT1-201ENST00000431803 LMOD3Q0VAK6 560 aa12.37□□□□□ -0.43
CDC42-IT1-201ENST00000431803 PDIA6Q15084 440 aa12.37□□□□□ -0.43
CDC42-IT1-201ENST00000431803 MFRPQ9BY79 579 aa12.37□□□□□ -0.43
CDC42-IT1-201ENST00000431803 NYXQ9GZU5 481 aa12.37□□□□□ -0.43
CDC42-IT1-201ENST00000431803 GTF2E1P29083 439 aaPredicted RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms