RNA–Protein interactions for RNA: ENST00000431543.6

LAMA4-208, Transcript of laminin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene LAMA4, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-208ENST00000431543 HSP90AB3PQ58FF7 597 aa18.3■□□□□ 0.52
LAMA4-208ENST00000431543 C3orf67Q6ZVT6 689 aa18.3■□□□□ 0.52
LAMA4-208ENST00000431543 PPP1R42Q7Z4L9 355 aa18.3■□□□□ 0.52
LAMA4-208ENST00000431543 UTP14AQ9BVJ6 771 aaKnown RBP18.3■□□□□ 0.52
LAMA4-208ENST00000431543 PDZRN3Q9UPQ7 1066 aa18.3■□□□□ 0.52
LAMA4-208ENST00000431543 ARFGEF1Q9Y6D6 1849 aa18.3■□□□□ 0.52
LAMA4-208ENST00000431543 SLC4A2P04920 1241 aa18.29■□□□□ 0.52
LAMA4-208ENST00000431543 STYK1Q6J9G0 422 aa18.29■□□□□ 0.52
LAMA4-208ENST00000431543 RIC3Q7Z5B4 369 aa18.29■□□□□ 0.52
LAMA4-208ENST00000431543 MASTLQ96GX5 879 aa18.29■□□□□ 0.52
LAMA4-208ENST00000431543 ISCA1Q9BUE6 129 aa18.29■□□□□ 0.52
LAMA4-208ENST00000431543 TRMT2AQ8IZ69 625 aaKnown RBP18.28■□□□□ 0.52
LAMA4-208ENST00000431543 ZNF784Q8NCA9 323 aaPredicted RBP18.28■□□□□ 0.52
LAMA4-208ENST00000431543 STK31Q9BXU1 1019 aa18.28■□□□□ 0.52
LAMA4-208ENST00000431543 CHMP4AQ9BY43 222 aa18.28■□□□□ 0.52
LAMA4-208ENST00000431543 IBTKQ9P2D0 1353 aaPredicted RBP18.28■□□□□ 0.52
LAMA4-208ENST00000431543 TNRC6CQ9HCJ0 1690 aaKnown RBP18.28■□□□□ 0.52
LAMA4-208ENST00000431543 C21orf2O43822 256 aa18.27■□□□□ 0.52
LAMA4-208ENST00000431543 NPR1P16066 1061 aa18.27■□□□□ 0.52
LAMA4-208ENST00000431543 TRMT112Q9UI30 125 aaKnown RBP18.27■□□□□ 0.52
LAMA4-208ENST00000431543 SLX4Q8IY92 1834 aa18.27■□□□□ 0.52
LAMA4-208ENST00000431543 ANKRD36CQ5JPF3 1778 aa18.27■□□□□ 0.51
LAMA4-208ENST00000431543 HCLS1P14317 486 aaPredicted RBP18.26■□□□□ 0.51
LAMA4-208ENST00000431543 CRY2Q49AN0 593 aa18.26■□□□□ 0.51
LAMA4-208ENST00000431543 SLC10A5Q5PT55 438 aa18.26■□□□□ 0.51
LAMA4-208ENST00000431543 PRPF40BQ6NWY9 871 aaKnown RBP18.26■□□□□ 0.51
LAMA4-208ENST00000431543 CNKSR1Q969H4 720 aa18.26■□□□□ 0.51
LAMA4-208ENST00000431543 MYD88Q99836 296 aa18.26■□□□□ 0.51
LAMA4-208ENST00000431543 ARFGEF2Q9Y6D5 1785 aa18.25■□□□□ 0.51
LAMA4-208ENST00000431543 PI4KAP2A4QPH2 592 aa18.25■□□□□ 0.51
LAMA4-208ENST00000431543 PRELPP51888 382 aa18.25■□□□□ 0.51
LAMA4-208ENST00000431543 RASSF7Q02833 373 aa18.25■□□□□ 0.51
LAMA4-208ENST00000431543 RTL5Q5HYW3 569 aaPredicted RBP18.25■□□□□ 0.51
LAMA4-208ENST00000431543 OLFM4Q6UX06 510 aa18.25■□□□□ 0.51
LAMA4-208ENST00000431543 PI4KAP1Q8N8J0 262 aa18.25■□□□□ 0.51
LAMA4-208ENST00000431543 C7orf43Q8WVR3 580 aa18.25■□□□□ 0.51
LAMA4-208ENST00000431543 FAM89AQ96GI7 184 aa18.25■□□□□ 0.51
LAMA4-208ENST00000431543 MAP3K2Q9Y2U5 619 aa18.25■□□□□ 0.51
LAMA4-208ENST00000431543 CT47B1P0C2W7 299 aaPredicted RBP18.24■□□□□ 0.51
LAMA4-208ENST00000431543 TRIM28Q13263 835 aaKnown RBP18.24■□□□□ 0.51
LAMA4-208ENST00000431543 KSR2Q6VAB6 950 aa18.24■□□□□ 0.51
LAMA4-208ENST00000431543 ADCY9O60503 1353 aa18.24■□□□□ 0.51
LAMA4-208ENST00000431543 SH3TC1Q8TE82 1336 aa18.23■□□□□ 0.51
LAMA4-208ENST00000431543 CACNA1SQ13698 1873 aa18.23■□□□□ 0.51
LAMA4-208ENST00000431543 NFKBIEO00221 500 aa18.23■□□□□ 0.51
LAMA4-208ENST00000431543 DDX58O95786 925 aaKnown RBP18.23■□□□□ 0.51
LAMA4-208ENST00000431543 C9orf131Q5VYM1 1079 aa18.23■□□□□ 0.51
LAMA4-208ENST00000431543 JARID2Q92833 1246 aaPredicted RBP18.23■□□□□ 0.51
LAMA4-208ENST00000431543 NLRP3Q96P20 1036 aa18.23■□□□□ 0.51
LAMA4-208ENST00000431543 METTL22Q9BUU2 404 aaPredicted RBP18.23■□□□□ 0.51
LAMA4-208ENST00000431543 RIC1Q4ADV7 1423 aa18.23■□□□□ 0.51
LAMA4-208ENST00000431543 HOXA10P31260 410 aaPredicted RBP18.22■□□□□ 0.51
LAMA4-208ENST00000431543 FLIIQ13045 1269 aa18.22■□□□□ 0.51
LAMA4-208ENST00000431543 SLC51AQ86UW1 340 aa18.22■□□□□ 0.51
LAMA4-208ENST00000431543 RPGRQ92834 1020 aaKnown RBP18.22■□□□□ 0.51
LAMA4-208ENST00000431543 IGKV5-2P06315 115 aa18.21■□□□□ 0.51
LAMA4-208ENST00000431543 RNF123Q5XPI4 1314 aa18.21■□□□□ 0.51
LAMA4-208ENST00000431543 ALDH1B1P30837 517 aa18.2■□□□□ 0.5
LAMA4-208ENST00000431543 ZNF526Q8TF50 670 aaPredicted RBP18.2■□□□□ 0.5
LAMA4-208ENST00000431543 RNF181Q9P0P0 153 aa18.2■□□□□ 0.5
LAMA4-208ENST00000431543 SBF1O95248 1867 aa18.2■□□□□ 0.5
LAMA4-208ENST00000431543 FKBP5Q13451 457 aaPredicted RBP18.19■□□□□ 0.5
LAMA4-208ENST00000431543 RBM17Q96I25 401 aaKnown RBP18.19■□□□□ 0.5
LAMA4-208ENST00000431543 CWF19L2Q2TBE0 894 aaKnown RBP18.18■□□□□ 0.5
LAMA4-208ENST00000431543 ZBTB38Q8NAP3 1195 aaPredicted RBP18.18■□□□□ 0.5
LAMA4-208ENST00000431543 CCDC191Q8NCU4 936 aa18.18■□□□□ 0.5
LAMA4-208ENST00000431543 CRAMP1Q96RY5 1269 aa18.18■□□□□ 0.5
LAMA4-208ENST00000431543 CWC25Q9NXE8 425 aaPredicted RBP18.18■□□□□ 0.5
LAMA4-208ENST00000431543 LAMB2P55268 1798 aa18.17■□□□□ 0.5
LAMA4-208ENST00000431543 IRS4O14654 1257 aaPredicted RBP18.17■□□□□ 0.5
LAMA4-208ENST00000431543 DDX60Q8IY21 1712 aaKnown RBP18.16■□□□□ 0.5
LAMA4-208ENST00000431543 F6X3S4 739 aa18.16■□□□□ 0.5
LAMA4-208ENST00000431543 LMNB1P20700 586 aa18.16■□□□□ 0.5
LAMA4-208ENST00000431543 DNAAF4Q8WXU2 420 aa18.16■□□□□ 0.5
LAMA4-208ENST00000431543 RCAN3Q9UKA8 241 aa18.16■□□□□ 0.5
LAMA4-208ENST00000431543 ABCC4O15439 1325 aa18.16■□□□□ 0.5
LAMA4-208ENST00000431543 FER1L6Q2WGJ9 1857 aa18.16■□□□□ 0.5
LAMA4-208ENST00000431543 NEURL1BA8MQ27 555 aa18.15■□□□□ 0.5
LAMA4-208ENST00000431543 PCCAP05165 728 aaPredicted RBP18.15■□□□□ 0.5
LAMA4-208ENST00000431543 NEXNQ0ZGT2 675 aa18.15■□□□□ 0.5
LAMA4-208ENST00000431543 CCDC93Q567U6 631 aa18.15■□□□□ 0.5
LAMA4-208ENST00000431543 MRPL50Q8N5N7 158 aaKnown RBP18.15■□□□□ 0.5
LAMA4-208ENST00000431543 CCDC88AQ3V6T2 1871 aa18.15■□□□□ 0.5
LAMA4-208ENST00000431543 CACNA1FO60840 1977 aa18.15■□□□□ 0.5
LAMA4-208ENST00000431543 TAF1P21675 1872 aa18.14■□□□□ 0.49
LAMA4-208ENST00000431543 PPEF1O14829 653 aaPredicted RBP18.14■□□□□ 0.49
LAMA4-208ENST00000431543 SF3B3Q15393 1217 aaKnown RBP18.14■□□□□ 0.49
LAMA4-208ENST00000431543 SOGA3Q5TF21 947 aa18.14■□□□□ 0.49
LAMA4-208ENST00000431543 SSH1Q8WYL5 1049 aa18.14■□□□□ 0.49
LAMA4-208ENST00000431543 TAOK3Q9H2K8 898 aa18.14■□□□□ 0.49
LAMA4-208ENST00000431543 ALDH1L2Q3SY69 923 aa18.13■□□□□ 0.49
LAMA4-208ENST00000431543 DDX46Q7L014 1031 aaKnown RBP18.13■□□□□ 0.49
LAMA4-208ENST00000431543 BCL2L13Q9BXK5 485 aa18.13■□□□□ 0.49
LAMA4-208ENST00000431543 LTBP3Q9NS15 1303 aa18.13■□□□□ 0.49
LAMA4-208ENST00000431543 GCKRQ14397 625 aa18.12■□□□□ 0.49
LAMA4-208ENST00000431543 RTKN2Q8IZC4 609 aa18.12■□□□□ 0.49
LAMA4-208ENST00000431543 LINS1Q8NG48 757 aa18.12■□□□□ 0.49
LAMA4-208ENST00000431543 GPBP1L1Q9HC44 474 aaPredicted RBP18.12■□□□□ 0.49
LAMA4-208ENST00000431543 ZNF277Q9NRM2 450 aaPredicted RBP18.12■□□□□ 0.49
LAMA4-208ENST00000431543 SNED1Q8TER0 1413 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms