RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 RWDD2BP57060 319 aa6.24□□□□□ -1.41
PTPN4-203ENST00000430976 TTLL12Q14166 644 aaPredicted RBP6.24□□□□□ -1.41
PTPN4-203ENST00000430976 DDB1Q16531 1140 aa6.24□□□□□ -1.41
PTPN4-203ENST00000430976 SAMD14Q8IZD0 417 aaPredicted RBP6.24□□□□□ -1.41
PTPN4-203ENST00000430976 GBP7Q8N8V2 638 aaPredicted RBP6.24□□□□□ -1.41
PTPN4-203ENST00000430976 SLC43A3Q8NBI5 491 aa6.24□□□□□ -1.41
PTPN4-203ENST00000430976 GABPB2Q8TAK5 448 aaPredicted RBP6.24□□□□□ -1.41
PTPN4-203ENST00000430976 SPACA7Q96KW9 195 aa6.24□□□□□ -1.41
PTPN4-203ENST00000430976 SPC25Q9HBM1 224 aa6.24□□□□□ -1.41
PTPN4-203ENST00000430976 TSKSQ9UJT2 592 aa6.24□□□□□ -1.41
PTPN4-203ENST00000430976 PRELID1Q9Y255 219 aa6.24□□□□□ -1.41
PTPN4-203ENST00000430976 ARPC4-TTLL3A0A0A6YYG9 625 aa6.24□□□□□ -1.41
PTPN4-203ENST00000430976 TUFMP49411 452 aaKnown RBP6.24□□□□□ -1.41
PTPN4-203ENST00000430976 ZNF449Q6P9G9 518 aa6.24□□□□□ -1.41
PTPN4-203ENST00000430976 LMNTD2Q8IXW0 634 aa6.24□□□□□ -1.41
PTPN4-203ENST00000430976 NUP133Q8WUM0 1156 aa6.24□□□□□ -1.41
PTPN4-203ENST00000430976 ERP27Q96DN0 273 aa6.24□□□□□ -1.41
PTPN4-203ENST00000430976 AMOTL2Q9Y2J4 779 aa6.24□□□□□ -1.41
PTPN4-203ENST00000430976 IL16Q14005 1332 aa6.24□□□□□ -1.41
PTPN4-203ENST00000430976 H0Y3Z8 333 aa6.23□□□□□ -1.41
PTPN4-203ENST00000430976 ZNF16P17020 682 aaPredicted RBP6.23□□□□□ -1.41
PTPN4-203ENST00000430976 SMARCA1P28370 1054 aa6.23□□□□□ -1.41
PTPN4-203ENST00000430976 ZC3H6P61129 1189 aaKnown RBP6.23□□□□□ -1.41
PTPN4-203ENST00000430976 CCDC144BQ3MJ40 725 aa6.23□□□□□ -1.41
PTPN4-203ENST00000430976 NANOGNBQ7Z5D8 188 aa6.23□□□□□ -1.41
PTPN4-203ENST00000430976 ARHGEF25Q86VW2 580 aa6.23□□□□□ -1.41
PTPN4-203ENST00000430976 NEK9Q8TD19 979 aa6.23□□□□□ -1.41
PTPN4-203ENST00000430976 DNAJC5Q9H3Z4 198 aa6.23□□□□□ -1.41
PTPN4-203ENST00000430976 BOLA2-SMG1P6H3BVE0 249 aa6.23□□□□□ -1.41
PTPN4-203ENST00000430976 MAP9Q49MG5 647 aa6.23□□□□□ -1.41
PTPN4-203ENST00000430976 GRPEL1Q9HAV7 217 aa6.23□□□□□ -1.41
PTPN4-203ENST00000430976 MRPL42Q9Y6G3 142 aaKnown RBP6.23□□□□□ -1.41
PTPN4-203ENST00000430976 INMTO95050 263 aa6.23□□□□□ -1.41
PTPN4-203ENST00000430976 CD151P48509 253 aa6.23□□□□□ -1.41
PTPN4-203ENST00000430976 RNF20Q5VTR2 975 aa6.23□□□□□ -1.41
PTPN4-203ENST00000430976 KSR2Q6VAB6 950 aa6.23□□□□□ -1.41
PTPN4-203ENST00000430976 ARHGAP27Q6ZUM4 889 aa6.23□□□□□ -1.41
PTPN4-203ENST00000430976 NEK10Q6ZWH5 1172 aa6.23□□□□□ -1.41
PTPN4-203ENST00000430976 JARID2Q92833 1246 aaPredicted RBP6.23□□□□□ -1.41
PTPN4-203ENST00000430976 TCHPQ9BT92 498 aa6.23□□□□□ -1.41
PTPN4-203ENST00000430976 COL4A3BPQ9Y5P4 624 aa6.23□□□□□ -1.41
PTPN4-203ENST00000430976 FIBPO43427 364 aa6.22□□□□□ -1.41
PTPN4-203ENST00000430976 IL33O95760 270 aa6.22□□□□□ -1.41
PTPN4-203ENST00000430976 OAS2P29728 719 aaKnown RBP6.22□□□□□ -1.41
PTPN4-203ENST00000430976 FAPQ12884 760 aa6.22□□□□□ -1.41
PTPN4-203ENST00000430976 NFE2L2Q16236 605 aa6.22□□□□□ -1.41
PTPN4-203ENST00000430976 KBTBD12Q3ZCT8 623 aa6.22□□□□□ -1.41
PTPN4-203ENST00000430976 RRP12Q5JTH9 1297 aaKnown RBP6.22□□□□□ -1.41
PTPN4-203ENST00000430976 DSTYKQ6XUX3 929 aa6.22□□□□□ -1.41
PTPN4-203ENST00000430976 CCDC80Q76M96 950 aa6.22□□□□□ -1.41
PTPN4-203ENST00000430976 SRLQ86TD4 932 aa6.22□□□□□ -1.41
PTPN4-203ENST00000430976 USP33Q8TEY7 942 aa6.22□□□□□ -1.41
PTPN4-203ENST00000430976 XPO4Q9C0E2 1151 aaKnown RBP6.22□□□□□ -1.41
PTPN4-203ENST00000430976 RETREG1Q9H6L5 497 aa6.22□□□□□ -1.41
PTPN4-203ENST00000430976 PRC1O43663 620 aa6.22□□□□□ -1.41
PTPN4-203ENST00000430976 TPPPO94811 219 aa6.22□□□□□ -1.41
PTPN4-203ENST00000430976 MYBL2P10244 700 aa6.22□□□□□ -1.41
PTPN4-203ENST00000430976 CLCN2P51788 898 aa6.22□□□□□ -1.41
PTPN4-203ENST00000430976 PSME1Q06323 249 aa6.22□□□□□ -1.41
PTPN4-203ENST00000430976 TRDNQ13061 729 aa6.22□□□□□ -1.41
PTPN4-203ENST00000430976 TEX35Q5T0J7 233 aa6.22□□□□□ -1.41
PTPN4-203ENST00000430976 SASS6Q6UVJ0 657 aa6.22□□□□□ -1.41
PTPN4-203ENST00000430976 EIF2AK1Q9BQI3 630 aaKnown RBP6.22□□□□□ -1.41
PTPN4-203ENST00000430976 PRSS47A8MTI9 375 aa6.22□□□□□ -1.41
PTPN4-203ENST00000430976 U2AF2P26368 475 aaKnown RBP eCLIP6.22□□□□□ -1.412e-6■■■□□ 16.3
PTPN4-203ENST00000430976 ATP6V1E1P36543 226 aa6.22□□□□□ -1.41
PTPN4-203ENST00000430976 PDCD2Q16342 344 aaPredicted RBP6.22□□□□□ -1.41
PTPN4-203ENST00000430976 COBLL1Q53SF7 1204 aa6.22□□□□□ -1.41
PTPN4-203ENST00000430976 ANO1Q5XXA6 986 aa6.22□□□□□ -1.41
PTPN4-203ENST00000430976 BEGAINQ9BUH8 593 aa6.22□□□□□ -1.41
PTPN4-203ENST00000430976 SUN2Q9UH99 717 aa6.22□□□□□ -1.41
PTPN4-203ENST00000430976 BICDL2A1A5D9 508 aa6.21□□□□□ -1.41
PTPN4-203ENST00000430976 RPSAP08865 295 aaKnown RBP6.21□□□□□ -1.41
PTPN4-203ENST00000430976 VDRP11473 427 aa6.21□□□□□ -1.41
PTPN4-203ENST00000430976 GUCY1B3Q02153 619 aa6.21□□□□□ -1.41
PTPN4-203ENST00000430976 NUCB1Q02818 461 aa6.21□□□□□ -1.41
PTPN4-203ENST00000430976 RCN1Q15293 331 aa6.21□□□□□ -1.41
PTPN4-203ENST00000430976 PTPN14Q15678 1187 aa6.21□□□□□ -1.41
PTPN4-203ENST00000430976 SEPT7Q16181 437 aaKnown RBP6.21□□□□□ -1.41
PTPN4-203ENST00000430976 CCDC152Q4G0S7 254 aa6.21□□□□□ -1.41
PTPN4-203ENST00000430976 ANKRD18AQ8IVF6 992 aa6.21□□□□□ -1.41
PTPN4-203ENST00000430976 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.21□□□□□ -1.412e-6■■■□□ 16
PTPN4-203ENST00000430976 CAPS2Q9BXY5 557 aa6.21□□□□□ -1.41
PTPN4-203ENST00000430976 TRIM4Q9C037 500 aa6.21□□□□□ -1.41
PTPN4-203ENST00000430976 GRXCR2A6NFK2 248 aa6.21□□□□□ -1.42
PTPN4-203ENST00000430976 MMEP08473 750 aa6.21□□□□□ -1.42
PTPN4-203ENST00000430976 MSL3P1P0C860 447 aa6.21□□□□□ -1.42
PTPN4-203ENST00000430976 DESP17661 470 aa6.21□□□□□ -1.42
PTPN4-203ENST00000430976 HPDP32754 393 aaPredicted RBP6.21□□□□□ -1.42
PTPN4-203ENST00000430976 HSPA4P34932 840 aa6.21□□□□□ -1.42
PTPN4-203ENST00000430976 TRAPPC10P48553 1259 aa6.21□□□□□ -1.42
PTPN4-203ENST00000430976 GBP6Q6ZN66 633 aa6.21□□□□□ -1.42
PTPN4-203ENST00000430976 TMC6Q7Z403 805 aa6.21□□□□□ -1.42
PTPN4-203ENST00000430976 MAATS1Q7Z4T9 603 aa6.21□□□□□ -1.42
PTPN4-203ENST00000430976 CACTIN-AS1Q8N1I8 211 aa6.21□□□□□ -1.42
PTPN4-203ENST00000430976 CNPY2Q9Y2B0 182 aa6.21□□□□□ -1.42
PTPN4-203ENST00000430976 STMND1H3BQB6 276 aa6.21□□□□□ -1.42
PTPN4-203ENST00000430976 PIK3CAP42336 1068 aa6.21□□□□□ -1.42
PTPN4-203ENST00000430976 GABPB1Q06547 395 aaPredicted RBP6.21□□□□□ -1.42
PTPN4-203ENST00000430976 BNIP1Q12981 228 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms