RNA–Protein interactions for RNA: ENST00000430705.5

PTPRA-206, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 733 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-206ENST00000430705 ZNF277Q9NRM2 450 aaPredicted RBP21.33■■□□□ 1.01
PTPRA-206ENST00000430705 ZNF541Q9H0D2 1346 aa21.32■■□□□ 1
PTPRA-206ENST00000430705 HOXA10P31260 410 aaPredicted RBP21.32■■□□□ 1
PTPRA-206ENST00000430705 POTEIP0CG38 1075 aa21.31■■□□□ 1
PTPRA-206ENST00000430705 POTEJP0CG39 1038 aa21.31■■□□□ 1
PTPRA-206ENST00000430705 ALDH1B1P30837 517 aa21.31■■□□□ 1
PTPRA-206ENST00000430705 XAGE3Q8WTP9 111 aa21.31■■□□□ 1
PTPRA-206ENST00000430705 ADAMTSL1Q8N6G6 1762 aa21.31■■□□□ 1
PTPRA-206ENST00000430705 DDX60Q8IY21 1712 aaKnown RBP21.3■■□□□ 1
PTPRA-206ENST00000430705 SCN4AP35499 1836 aa21.3■■□□□ 1
PTPRA-206ENST00000430705 DPY19L2Q6NUT2 758 aa21.3■■□□□ 1
PTPRA-206ENST00000430705 COPS6Q7L5N1 327 aa21.3■■□□□ 1
PTPRA-206ENST00000430705 PARP10Q53GL7 1025 aa21.29■■□□□ 1
PTPRA-206ENST00000430705 DDX21Q9NR30 783 aaKnown RBP eCLIP21.29■■□□□ 1
PTPRA-206ENST00000430705 CHPF2Q9P2E5 772 aa21.29■■□□□ 1
PTPRA-206ENST00000430705 LAS1LQ9Y4W2 734 aaKnown RBP21.29■■□□□ 1
PTPRA-206ENST00000430705 AIMP1Q12904 312 aaKnown RBP21.28■■□□□ 1
PTPRA-206ENST00000430705 RTKN2Q8IZC4 609 aa21.28■■□□□ 1
PTPRA-206ENST00000430705 SYNE4Q8N205 404 aa21.28■■□□□ 1
PTPRA-206ENST00000430705 L3MBTL3Q96JM7 780 aaPredicted RBP21.28■■□□□ 1
PTPRA-206ENST00000430705 COL4A1P02462 1669 aa21.28■■□□□ 1
PTPRA-206ENST00000430705 LTBP1Q14766 1721 aa21.27■■□□□ 1
PTPRA-206ENST00000430705 ZNF853P0CG23 659 aa21.27■■□□□ 1
PTPRA-206ENST00000430705 IARSP41252 1262 aaKnown RBP21.27■■□□□ 1
PTPRA-206ENST00000430705 PPP1R42Q7Z4L9 355 aa21.27■■□□□ 1
PTPRA-206ENST00000430705 NLRP10Q86W26 655 aa21.27■■□□□ 1
PTPRA-206ENST00000430705 RPGRQ92834 1020 aaKnown RBP21.27■■□□□ 1
PTPRA-206ENST00000430705 KLRG1Q96E93 195 aa21.27■■□□□ 1
PTPRA-206ENST00000430705 PSMD1Q99460 953 aa21.27■■□□□ 1
PTPRA-206ENST00000430705 SLC10A5Q5PT55 438 aa21.26■□□□□ 0.99
PTPRA-206ENST00000430705 CFAP44Q96MT7 982 aa21.26■□□□□ 0.99
PTPRA-206ENST00000430705 CRAMP1Q96RY5 1269 aa21.26■□□□□ 0.99
PTPRA-206ENST00000430705 UTP14AQ9BVJ6 771 aaKnown RBP21.26■□□□□ 0.99
PTPRA-206ENST00000430705 MBIPQ9NS73 344 aa21.26■□□□□ 0.99
PTPRA-206ENST00000430705 CCDC184Q52MB2 194 aa21.25■□□□□ 0.99
PTPRA-206ENST00000430705 HDGFL1Q5TGJ6 251 aa21.25■□□□□ 0.99
PTPRA-206ENST00000430705 TAF1P21675 1872 aa21.24■□□□□ 0.99
PTPRA-206ENST00000430705 LRRC37AA6NMS7 1700 aa21.24■□□□□ 0.99
PTPRA-206ENST00000430705 FZD9O00144 591 aa21.24■□□□□ 0.99
PTPRA-206ENST00000430705 APAF1O14727 1248 aa21.24■□□□□ 0.99
PTPRA-206ENST00000430705 PPEF1O14829 653 aaPredicted RBP21.24■□□□□ 0.99
PTPRA-206ENST00000430705 HOXB7P09629 217 aa21.24■□□□□ 0.99
PTPRA-206ENST00000430705 ABCC4O15439 1325 aa21.24■□□□□ 0.99
PTPRA-206ENST00000430705 RNF123Q5XPI4 1314 aa21.24■□□□□ 0.99
PTPRA-206ENST00000430705 DUOX1Q9NRD9 1551 aa21.23■□□□□ 0.99
PTPRA-206ENST00000430705 TCIRG1Q13488 830 aa21.23■□□□□ 0.99
PTPRA-206ENST00000430705 JMYQ8N9B5 988 aa21.23■□□□□ 0.99
PTPRA-206ENST00000430705 ZNF428Q96B54 188 aa21.23■□□□□ 0.99
PTPRA-206ENST00000430705 RBM17Q96I25 401 aaKnown RBP21.23■□□□□ 0.99
PTPRA-206ENST00000430705 HSP90AB3PQ58FF7 597 aa21.22■□□□□ 0.99
PTPRA-206ENST00000430705 DUSP27Q5VZP5 1158 aa21.22■□□□□ 0.99
PTPRA-206ENST00000430705 CC2D2BQ6DHV5 1058 aa21.22■□□□□ 0.99
PTPRA-206ENST00000430705 TAF1DQ9H5J8 278 aaPredicted RBP21.22■□□□□ 0.99
PTPRA-206ENST00000430705 TCERG1O14776 1098 aaKnown RBP21.21■□□□□ 0.99
PTPRA-206ENST00000430705 HCLS1P14317 486 aaPredicted RBP21.21■□□□□ 0.99
PTPRA-206ENST00000430705 CHADLQ6NUI6 762 aa21.21■□□□□ 0.99
PTPRA-206ENST00000430705 NLRP3Q96P20 1036 aa21.21■□□□□ 0.99
PTPRA-206ENST00000430705 PLBD2Q8NHP8 589 aa21.2■□□□□ 0.98
PTPRA-206ENST00000430705 ISCA1Q9BUE6 129 aa21.2■□□□□ 0.98
PTPRA-206ENST00000430705 IFT57Q9NWB7 429 aa21.2■□□□□ 0.98
PTPRA-206ENST00000430705 DBF4Q9UBU7 674 aaPredicted RBP21.19■□□□□ 0.98
PTPRA-206ENST00000430705 IQCA1LA6NCM1 817 aa21.18■□□□□ 0.98
PTPRA-206ENST00000430705 TRMT112Q9UI30 125 aaKnown RBP21.18■□□□□ 0.98
PTPRA-206ENST00000430705 ATP6V0A2Q9Y487 856 aa21.18■□□□□ 0.98
PTPRA-206ENST00000430705 SH3TC1Q8TE82 1336 aa21.18■□□□□ 0.98
PTPRA-206ENST00000430705 PASKQ96RG2 1323 aa21.18■□□□□ 0.98
PTPRA-206ENST00000430705 LDHDQ86WU2 507 aa21.17■□□□□ 0.98
PTPRA-206ENST00000430705 ATP5J2-PTCD1G3V325 749 aa21.16■□□□□ 0.98
PTPRA-206ENST00000430705 ANKRD13DQ6ZTN6 518 aa21.16■□□□□ 0.98
PTPRA-206ENST00000430705 GPC2Q8N158 579 aa21.16■□□□□ 0.98
PTPRA-206ENST00000430705 C8orf58Q8NAV2 365 aa21.16■□□□□ 0.98
PTPRA-206ENST00000430705 HACL1Q9UJ83 578 aa21.16■□□□□ 0.98
PTPRA-206ENST00000430705 EPHX2P34913 555 aa21.15■□□□□ 0.98
PTPRA-206ENST00000430705 GRIPAP1Q4V328 841 aa21.15■□□□□ 0.98
PTPRA-206ENST00000430705 IFFO2Q5TF58 517 aa21.15■□□□□ 0.98
PTPRA-206ENST00000430705 JDP2Q8WYK2 163 aa21.15■□□□□ 0.98
PTPRA-206ENST00000430705 RTFDC1Q9BY42 306 aaPredicted RBP21.15■□□□□ 0.98
PTPRA-206ENST00000430705 PHAXQ9H814 394 aaKnown RBP21.15■□□□□ 0.98
PTPRA-206ENST00000430705 HYPKQ9NX55 129 aa21.15■□□□□ 0.98
PTPRA-206ENST00000430705 GNAI1P63096 354 aa21.14■□□□□ 0.97
PTPRA-206ENST00000430705 AOC3Q16853 763 aa21.14■□□□□ 0.97
PTPRA-206ENST00000430705 LARGE2Q8N3Y3 721 aa21.14■□□□□ 0.97
PTPRA-206ENST00000430705 ELL2O00472 640 aaPredicted RBP21.13■□□□□ 0.97
PTPRA-206ENST00000430705 ITGBL1O95965 494 aaPredicted RBP21.13■□□□□ 0.97
PTPRA-206ENST00000430705 SCNN1DP51172 638 aa21.13■□□□□ 0.97
PTPRA-206ENST00000430705 GRAPQ13588 217 aa21.13■□□□□ 0.97
PTPRA-206ENST00000430705 EAPPQ56P03 285 aaPredicted RBP21.13■□□□□ 0.97
PTPRA-206ENST00000430705 GRAPLQ8TC17 118 aaPredicted RBP21.13■□□□□ 0.97
PTPRA-206ENST00000430705 FAM89AQ96GI7 184 aa21.13■□□□□ 0.97
PTPRA-206ENST00000430705 PPIP5K2O43314 1243 aa21.12■□□□□ 0.97
PTPRA-206ENST00000430705 SP8Q8IXZ3 490 aa21.12■□□□□ 0.97
PTPRA-206ENST00000430705 CREBZFQ9NS37 354 aa21.12■□□□□ 0.97
PTPRA-206ENST00000430705 GJA3Q9Y6H8 435 aa21.12■□□□□ 0.97
PTPRA-206ENST00000430705 BBOX1O75936 387 aa21.11■□□□□ 0.97
PTPRA-206ENST00000430705 EIF6P56537 245 aaKnown RBP21.11■□□□□ 0.97
PTPRA-206ENST00000430705 DDX46Q7L014 1031 aaKnown RBP21.11■□□□□ 0.97
PTPRA-206ENST00000430705 TSPYL6Q8N831 410 aa21.11■□□□□ 0.97
PTPRA-206ENST00000430705 CALD1Q05682 793 aaKnown RBP21.1■□□□□ 0.97
PTPRA-206ENST00000430705 TRIM28Q13263 835 aaKnown RBP21.1■□□□□ 0.97
PTPRA-206ENST00000430705 NIM1KQ8IY84 436 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms