RNA–Protein interactions for RNA: ENST00000430454.5

HDAC9-211, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-211ENST00000430454 TCIRG1Q13488 830 aa11.81□□□□□ -0.52
HDAC9-211ENST00000430454 DUSP27Q5VZP5 1158 aa11.81□□□□□ -0.52
HDAC9-211ENST00000430454 NUTM1Q86Y26 1132 aa11.81□□□□□ -0.52
HDAC9-211ENST00000430454 NECTIN2Q92692 538 aa11.81□□□□□ -0.52
HDAC9-211ENST00000430454 CRAMP1Q96RY5 1269 aa11.81□□□□□ -0.52
HDAC9-211ENST00000430454 NTSR2O95665 410 aa11.8□□□□□ -0.52
HDAC9-211ENST00000430454 GOLGA2Q08379 1002 aa11.8□□□□□ -0.52
HDAC9-211ENST00000430454 SLC10A5Q5PT55 438 aa11.8□□□□□ -0.52
HDAC9-211ENST00000430454 ANKRD13DQ6ZTN6 518 aa11.8□□□□□ -0.52
HDAC9-211ENST00000430454 PLBD2Q8NHP8 589 aa11.8□□□□□ -0.52
HDAC9-211ENST00000430454 C7orf43Q8WVR3 580 aa11.8□□□□□ -0.52
HDAC9-211ENST00000430454 JDP2Q8WYK2 163 aa11.8□□□□□ -0.52
HDAC9-211ENST00000430454 MBIPQ9NS73 344 aa11.8□□□□□ -0.52
HDAC9-211ENST00000430454 CHPF2Q9P2E5 772 aa11.8□□□□□ -0.52
HDAC9-211ENST00000430454 TNRC6CQ9HCJ0 1690 aaKnown RBP11.8□□□□□ -0.52
HDAC9-211ENST00000430454 SBF1O95248 1867 aa11.8□□□□□ -0.52
HDAC9-211ENST00000430454 UBN2Q6ZU65 1347 aa11.8□□□□□ -0.52
HDAC9-211ENST00000430454 COL11A2P13942 1736 aaPredicted RBP11.8□□□□□ -0.52
HDAC9-211ENST00000430454 NUP98P52948 1817 aa11.79□□□□□ -0.52
HDAC9-211ENST00000430454 DDX58O95786 925 aaKnown RBP11.79□□□□□ -0.52
HDAC9-211ENST00000430454 PROSER3Q2NL68 480 aa11.79□□□□□ -0.52
HDAC9-211ENST00000430454 NCBP3Q53F19 620 aaKnown RBP11.79□□□□□ -0.52
HDAC9-211ENST00000430454 LRP10Q7Z4F1 713 aa11.79□□□□□ -0.52
HDAC9-211ENST00000430454 SUPT20HQ8NEM7 779 aa11.79□□□□□ -0.52
HDAC9-211ENST00000430454 PSMD1Q99460 953 aa11.79□□□□□ -0.52
HDAC9-211ENST00000430454 MRS2Q9HD23 443 aa11.79□□□□□ -0.52
HDAC9-211ENST00000430454 TRMT112Q9UI30 125 aaKnown RBP11.79□□□□□ -0.52
HDAC9-211ENST00000430454 SH3TC1Q8TE82 1336 aa11.79□□□□□ -0.52
HDAC9-211ENST00000430454 CEP350Q5VT06 3117 aa11.78□□□□□ -0.52
HDAC9-211ENST00000430454 ARFGEF2Q9Y6D5 1785 aa11.78□□□□□ -0.52
HDAC9-211ENST00000430454 PPEF1O14829 653 aaPredicted RBP11.78□□□□□ -0.52
HDAC9-211ENST00000430454 BBOX1O75936 387 aa11.78□□□□□ -0.52
HDAC9-211ENST00000430454 ANXA1P04083 346 aa11.78□□□□□ -0.52
HDAC9-211ENST00000430454 ZNF853P0CG23 659 aa11.78□□□□□ -0.52
HDAC9-211ENST00000430454 CCDC27Q2M243 656 aa11.78□□□□□ -0.52
HDAC9-211ENST00000430454 CCDC30Q5VVM6 783 aa11.78□□□□□ -0.52
HDAC9-211ENST00000430454 DDX46Q7L014 1031 aaKnown RBP11.78□□□□□ -0.52
HDAC9-211ENST00000430454 TMC4Q7Z404 712 aa11.78□□□□□ -0.52
HDAC9-211ENST00000430454 NLRP10Q86W26 655 aa11.78□□□□□ -0.52
HDAC9-211ENST00000430454 VPS33BQ9H267 617 aa11.78□□□□□ -0.52
HDAC9-211ENST00000430454 ABCC12Q96J65 1359 aa11.78□□□□□ -0.52
HDAC9-211ENST00000430454 SLX4Q8IY92 1834 aa11.77□□□□□ -0.52
HDAC9-211ENST00000430454 FER1L6Q2WGJ9 1857 aa11.77□□□□□ -0.53
HDAC9-211ENST00000430454 IARSP41252 1262 aaKnown RBP11.77□□□□□ -0.53
HDAC9-211ENST00000430454 RIC3Q7Z5B4 369 aa11.77□□□□□ -0.53
HDAC9-211ENST00000430454 SYNE4Q8N205 404 aa11.77□□□□□ -0.53
HDAC9-211ENST00000430454 ZNF277Q9NRM2 450 aaPredicted RBP11.77□□□□□ -0.53
HDAC9-211ENST00000430454 PRELPP51888 382 aa11.76□□□□□ -0.53
HDAC9-211ENST00000430454 EIF6P56537 245 aaKnown RBP11.76□□□□□ -0.53
HDAC9-211ENST00000430454 KRT24Q2M2I5 525 aa11.76□□□□□ -0.53
HDAC9-211ENST00000430454 STK31Q9BXU1 1019 aa11.76□□□□□ -0.53
HDAC9-211ENST00000430454 TIAM2Q8IVF5 1701 aa11.76□□□□□ -0.53
HDAC9-211ENST00000430454 TRIM28Q13263 835 aaKnown RBP11.75□□□□□ -0.53
HDAC9-211ENST00000430454 ATP6V0A2Q9Y487 856 aa11.75□□□□□ -0.53
HDAC9-211ENST00000430454 IL16Q14005 1332 aa11.75□□□□□ -0.53
HDAC9-211ENST00000430454 PNMA8AQ86V59 439 aaPredicted RBP11.74□□□□□ -0.53
HDAC9-211ENST00000430454 SP8Q8IXZ3 490 aa11.74□□□□□ -0.53
HDAC9-211ENST00000430454 NIM1KQ8IY84 436 aa11.74□□□□□ -0.53
HDAC9-211ENST00000430454 GPC2Q8N158 579 aa11.74□□□□□ -0.53
HDAC9-211ENST00000430454 LARGE2Q8N3Y3 721 aa11.74□□□□□ -0.53
HDAC9-211ENST00000430454 L3MBTL3Q96JM7 780 aaPredicted RBP11.74□□□□□ -0.53
HDAC9-211ENST00000430454 DICER1Q9UPY3 1922 aaKnown RBP11.74□□□□□ -0.53
HDAC9-211ENST00000430454 ELL2O00472 640 aaPredicted RBP11.73□□□□□ -0.53
HDAC9-211ENST00000430454 TCERG1O14776 1098 aaKnown RBP11.73□□□□□ -0.53
HDAC9-211ENST00000430454 DDNO94850 711 aaPredicted RBP11.73□□□□□ -0.53
HDAC9-211ENST00000430454 HCLS1P14317 486 aaPredicted RBP11.73□□□□□ -0.53
HDAC9-211ENST00000430454 LMOD1P29536 600 aaPredicted RBP11.73□□□□□ -0.53
HDAC9-211ENST00000430454 NEXNQ0ZGT2 675 aa11.73□□□□□ -0.53
HDAC9-211ENST00000430454 GRAPQ13588 217 aa11.73□□□□□ -0.53
HDAC9-211ENST00000430454 CACNA1SQ13698 1873 aa11.73□□□□□ -0.53
HDAC9-211ENST00000430454 CCDC88AQ3V6T2 1871 aa11.73□□□□□ -0.53
HDAC9-211ENST00000430454 CHADLQ6NUI6 762 aa11.73□□□□□ -0.53
HDAC9-211ENST00000430454 DPP8Q6V1X1 898 aaPredicted RBP11.73□□□□□ -0.53
HDAC9-211ENST00000430454 GRAPLQ8TC17 118 aaPredicted RBP11.73□□□□□ -0.53
HDAC9-211ENST00000430454 WDR90Q96KV7 1748 aa11.73□□□□□ -0.53
HDAC9-211ENST00000430454 ISCA1Q9BUE6 129 aa11.73□□□□□ -0.53
HDAC9-211ENST00000430454 HACL1Q9UJ83 578 aa11.73□□□□□ -0.53
HDAC9-211ENST00000430454 ABCC4O15439 1325 aa11.72□□□□□ -0.53
HDAC9-211ENST00000430454 ATP5J2-PTCD1G3V325 749 aa11.72□□□□□ -0.53
HDAC9-211ENST00000430454 FZD9O00144 591 aa11.72□□□□□ -0.53
HDAC9-211ENST00000430454 LDHDQ86WU2 507 aa11.72□□□□□ -0.53
HDAC9-211ENST00000430454 WDR63Q8IWG1 891 aa11.72□□□□□ -0.53
HDAC9-211ENST00000430454 WWC1Q8IX03 1113 aa11.72□□□□□ -0.53
HDAC9-211ENST00000430454 MPNDQ8N594 471 aa11.72□□□□□ -0.53
HDAC9-211ENST00000430454 C8orf58Q8NAV2 365 aa11.72□□□□□ -0.53
HDAC9-211ENST00000430454 CCDC191Q8NCU4 936 aa11.72□□□□□ -0.53
HDAC9-211ENST00000430454 ANKRD36CQ5JPF3 1778 aa11.72□□□□□ -0.53
HDAC9-211ENST00000430454 IRS4O14654 1257 aaPredicted RBP11.71□□□□□ -0.53
HDAC9-211ENST00000430454 PPIP5K2O43314 1243 aa11.71□□□□□ -0.53
HDAC9-211ENST00000430454 SF3B3Q15393 1217 aaKnown RBP11.71□□□□□ -0.53
HDAC9-211ENST00000430454 OLFM4Q6UX06 510 aa11.71□□□□□ -0.53
HDAC9-211ENST00000430454 ZBTB38Q8NAP3 1195 aaPredicted RBP11.71□□□□□ -0.53
HDAC9-211ENST00000430454 FAM89AQ96GI7 184 aa11.71□□□□□ -0.53
HDAC9-211ENST00000430454 CWC25Q9NXE8 425 aaPredicted RBP11.71□□□□□ -0.53
HDAC9-211ENST00000430454 CLEC11AQ9Y240 323 aa11.71□□□□□ -0.53
HDAC9-211ENST00000430454 POTECB2RU33 542 aa11.7□□□□□ -0.54
HDAC9-211ENST00000430454 KCNA4P22459 653 aa11.7□□□□□ -0.54
HDAC9-211ENST00000430454 TWISTNBQ3B726 338 aaPredicted RBP11.7□□□□□ -0.54
HDAC9-211ENST00000430454 C3orf67Q6ZVT6 689 aa11.7□□□□□ -0.54
HDAC9-211ENST00000430454 MYD88Q99836 296 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms