RNA–Protein interactions for RNA: ENST00000430293.1

POLR1B-206, Transcript of RNA polymerase I subunit B, humanhuman

TSL 4

Gene POLR1B, Length 595 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-206ENST00000430293 LAMB2P55268 1798 aa16.15■□□□□ 0.18
POLR1B-206ENST00000430293 ZNF316A6NFI3 1004 aaPredicted RBP16.15■□□□□ 0.18
POLR1B-206ENST00000430293 NPR1P16066 1061 aa16.15■□□□□ 0.18
POLR1B-206ENST00000430293 ERFEQ4G0M1 354 aa16.15■□□□□ 0.18
POLR1B-206ENST00000430293 LAS1LQ9Y4W2 734 aaKnown RBP16.15■□□□□ 0.18
POLR1B-206ENST00000430293 HOXB7P09629 217 aa16.14■□□□□ 0.17
POLR1B-206ENST00000430293 C3orf67Q6ZVT6 689 aa16.14■□□□□ 0.17
POLR1B-206ENST00000430293 XAGE3Q8WTP9 111 aa16.14■□□□□ 0.17
POLR1B-206ENST00000430293 DDX21Q9NR30 783 aaKnown RBP eCLIP16.14■□□□□ 0.17
POLR1B-206ENST00000430293 CHPF2Q9P2E5 772 aa16.14■□□□□ 0.17
POLR1B-206ENST00000430293 OLFM4Q6UX06 510 aa16.13■□□□□ 0.17
POLR1B-206ENST00000430293 COPS6Q7L5N1 327 aa16.13■□□□□ 0.17
POLR1B-206ENST00000430293 SLC51AQ86UW1 340 aa16.13■□□□□ 0.17
POLR1B-206ENST00000430293 NYXQ9GZU5 481 aa16.13■□□□□ 0.17
POLR1B-206ENST00000430293 SLC34A2O95436 690 aa16.12■□□□□ 0.17
POLR1B-206ENST00000430293 HDGFL1Q5TGJ6 251 aa16.12■□□□□ 0.17
POLR1B-206ENST00000430293 TAOK3Q9H2K8 898 aa16.12■□□□□ 0.17
POLR1B-206ENST00000430293 IFT57Q9NWB7 429 aa16.12■□□□□ 0.17
POLR1B-206ENST00000430293 DDX60Q8IY21 1712 aaKnown RBP16.11■□□□□ 0.17
POLR1B-206ENST00000430293 DUSP27Q5VZP5 1158 aa16.11■□□□□ 0.17
POLR1B-206ENST00000430293 COL4A5P29400 1685 aa16.11■□□□□ 0.17
POLR1B-206ENST00000430293 AIMP1Q12904 312 aaKnown RBP16.1■□□□□ 0.17
POLR1B-206ENST00000430293 PARP10Q53GL7 1025 aa16.1■□□□□ 0.17
POLR1B-206ENST00000430293 CCDC93Q567U6 631 aa16.1■□□□□ 0.17
POLR1B-206ENST00000430293 GTF2E1P29083 439 aaPredicted RBP16.09■□□□□ 0.17
POLR1B-206ENST00000430293 HOXA10P31260 410 aaPredicted RBP16.09■□□□□ 0.17
POLR1B-206ENST00000430293 SOGA3Q5TF21 947 aa16.09■□□□□ 0.17
POLR1B-206ENST00000430293 NLRP10Q86W26 655 aa16.09■□□□□ 0.17
POLR1B-206ENST00000430293 CREBZFQ9NS37 354 aa16.09■□□□□ 0.17
POLR1B-206ENST00000430293 COL4A1P02462 1669 aa16.08■□□□□ 0.17
POLR1B-206ENST00000430293 FOXN1O15353 648 aa16.08■□□□□ 0.16
POLR1B-206ENST00000430293 TNRC18O15417 2968 aaPredicted RBP16.08■□□□□ 0.16
POLR1B-206ENST00000430293 TCIRG1Q13488 830 aa16.08■□□□□ 0.16
POLR1B-206ENST00000430293 POTEIP0CG38 1075 aa16.07■□□□□ 0.16
POLR1B-206ENST00000430293 POTEJP0CG39 1038 aa16.07■□□□□ 0.16
POLR1B-206ENST00000430293 GNAI1P63096 354 aa16.07■□□□□ 0.16
POLR1B-206ENST00000430293 FKBP4Q02790 459 aaKnown RBP eCLIP16.07■□□□□ 0.16
POLR1B-206ENST00000430293 CCDC27Q2M243 656 aa16.07■□□□□ 0.16
POLR1B-206ENST00000430293 SLC10A5Q5PT55 438 aa16.07■□□□□ 0.16
POLR1B-206ENST00000430293 PPP1R42Q7Z4L9 355 aa16.07■□□□□ 0.16
POLR1B-206ENST00000430293 SYNE4Q8N205 404 aa16.07■□□□□ 0.16
POLR1B-206ENST00000430293 C8orf58Q8NAV2 365 aa16.07■□□□□ 0.16
POLR1B-206ENST00000430293 UTP14AQ9BVJ6 771 aaKnown RBP16.07■□□□□ 0.16
POLR1B-206ENST00000430293 DBF4Q9UBU7 674 aaPredicted RBP16.07■□□□□ 0.16
POLR1B-206ENST00000430293 RNF123Q5XPI4 1314 aa16.07■□□□□ 0.16
POLR1B-206ENST00000430293 SCN4AP35499 1836 aa16.06■□□□□ 0.16
POLR1B-206ENST00000430293 ADAMTSL1Q8N6G6 1762 aa16.06■□□□□ 0.16
POLR1B-206ENST00000430293 CNTNAP1P78357 1384 aa16.06■□□□□ 0.16
POLR1B-206ENST00000430293 HSP90AB3PQ58FF7 597 aa16.06■□□□□ 0.16
POLR1B-206ENST00000430293 PLBD2Q8NHP8 589 aa16.06■□□□□ 0.16
POLR1B-206ENST00000430293 MRS2Q9HD23 443 aa16.06■□□□□ 0.16
POLR1B-206ENST00000430293 MKRN1Q9UHC7 482 aaKnown RBP16.06■□□□□ 0.16
POLR1B-206ENST00000430293 LRRC37AA6NMS7 1700 aa16.05■□□□□ 0.16
POLR1B-206ENST00000430293 PASKQ96RG2 1323 aa16.05■□□□□ 0.16
POLR1B-206ENST00000430293 ANP32CO43423 234 aa16.05■□□□□ 0.16
POLR1B-206ENST00000430293 ALDH1B1P30837 517 aa16.05■□□□□ 0.16
POLR1B-206ENST00000430293 CALD1Q05682 793 aaKnown RBP16.05■□□□□ 0.16
POLR1B-206ENST00000430293 TSPYL6Q8N831 410 aa16.05■□□□□ 0.16
POLR1B-206ENST00000430293 TSR2Q969E8 191 aaKnown RBP16.05■□□□□ 0.16
POLR1B-206ENST00000430293 ISCA1Q9BUE6 129 aa16.05■□□□□ 0.16
POLR1B-206ENST00000430293 PRDM10Q9NQV6 1147 aa16.05■□□□□ 0.16
POLR1B-206ENST00000430293 ZNF277Q9NRM2 450 aaPredicted RBP16.05■□□□□ 0.16
POLR1B-206ENST00000430293 TAF1P21675 1872 aa16.04■□□□□ 0.16
POLR1B-206ENST00000430293 ABCC4O15439 1325 aa16.04■□□□□ 0.16
POLR1B-206ENST00000430293 ZNF541Q9H0D2 1346 aa16.04■□□□□ 0.16
POLR1B-206ENST00000430293 ELL2O00472 640 aaPredicted RBP16.04■□□□□ 0.16
POLR1B-206ENST00000430293 CHADLQ6NUI6 762 aa16.04■□□□□ 0.16
POLR1B-206ENST00000430293 WWC1Q8IX03 1113 aa16.04■□□□□ 0.16
POLR1B-206ENST00000430293 RPGRQ92834 1020 aaKnown RBP16.04■□□□□ 0.16
POLR1B-206ENST00000430293 ZNF428Q96B54 188 aa16.04■□□□□ 0.16
POLR1B-206ENST00000430293 CRAMP1Q96RY5 1269 aa16.04■□□□□ 0.16
POLR1B-206ENST00000430293 PHAXQ9H814 394 aaKnown RBP16.04■□□□□ 0.16
POLR1B-206ENST00000430293 HYPKQ9NX55 129 aa16.04■□□□□ 0.16
POLR1B-206ENST00000430293 DUOX1Q9NRD9 1551 aa16.04■□□□□ 0.16
POLR1B-206ENST00000430293 HCLS1P14317 486 aaPredicted RBP16.03■□□□□ 0.16
POLR1B-206ENST00000430293 ANKRD13DQ6ZTN6 518 aa16.03■□□□□ 0.16
POLR1B-206ENST00000430293 RTKN2Q8IZC4 609 aa16.03■□□□□ 0.16
POLR1B-206ENST00000430293 PSMD1Q99460 953 aa16.03■□□□□ 0.16
POLR1B-206ENST00000430293 SH3TC1Q8TE82 1336 aa16.02■□□□□ 0.16
POLR1B-206ENST00000430293 PPEF1O14829 653 aaPredicted RBP16.02■□□□□ 0.16
POLR1B-206ENST00000430293 DDNO94850 711 aaPredicted RBP16.02■□□□□ 0.16
POLR1B-206ENST00000430293 NCBP3Q53F19 620 aaKnown RBP16.02■□□□□ 0.16
POLR1B-206ENST00000430293 RBM17Q96I25 401 aaKnown RBP16.02■□□□□ 0.16
POLR1B-206ENST00000430293 NLRP3Q96P20 1036 aa16.02■□□□□ 0.16
POLR1B-206ENST00000430293 ATP5J2-PTCD1G3V325 749 aa16.01■□□□□ 0.15
POLR1B-206ENST00000430293 IARSP41252 1262 aaKnown RBP16.01■□□□□ 0.15
POLR1B-206ENST00000430293 DPY19L2Q6NUT2 758 aa16.01■□□□□ 0.15
POLR1B-206ENST00000430293 TRMT112Q9UI30 125 aaKnown RBP16.01■□□□□ 0.15
POLR1B-206ENST00000430293 LTBP1Q14766 1721 aa16.01■□□□□ 0.15
POLR1B-206ENST00000430293 L3MBTL3Q96JM7 780 aaPredicted RBP16■□□□□ 0.15
POLR1B-206ENST00000430293 IL16Q14005 1332 aa15.99■□□□□ 0.15
POLR1B-206ENST00000430293 THSD7BQ9C0I4 1608 aa15.99■□□□□ 0.15
POLR1B-206ENST00000430293 FZD9O00144 591 aa15.99■□□□□ 0.15
POLR1B-206ENST00000430293 VEGFBP49765 207 aa15.99■□□□□ 0.15
POLR1B-206ENST00000430293 TRIM28Q13263 835 aaKnown RBP15.99■□□□□ 0.15
POLR1B-206ENST00000430293 CC2D2BQ6DHV5 1058 aa15.99■□□□□ 0.15
POLR1B-206ENST00000430293 WBP1LQ9NX94 342 aa15.99■□□□□ 0.15
POLR1B-206ENST00000430293 ATP6V0A2Q9Y487 856 aa15.99■□□□□ 0.15
POLR1B-206ENST00000430293 FANCIQ9NVI1 1328 aa15.98■□□□□ 0.15
POLR1B-206ENST00000430293 CTCFP49711 727 aaPredicted RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms