RNA–Protein interactions for RNA: ENST00000430249.6

CPS1-203, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best) BASIC

Gene CPS1, Length 5,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-203ENST00000430249 CERS3Q8IU89 383 aa8.12□□□□□ -1.11
CPS1-203ENST00000430249 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.12□□□□□ -1.11
CPS1-203ENST00000430249 UNC13AQ9UPW8 1703 aa8.12□□□□□ -1.11
CPS1-203ENST00000430249 CCDC171Q6TFL3 1326 aa8.12□□□□□ -1.11
CPS1-203ENST00000430249 UQCRHLA0A096LP55 91 aa8.12□□□□□ -1.11
CPS1-203ENST00000430249 GOLGA6L10A0A0M3HER8 536 aa8.12□□□□□ -1.11
CPS1-203ENST00000430249 UQCRHP07919 91 aa8.12□□□□□ -1.11
CPS1-203ENST00000430249 MATR3P43243 847 aaKnown RBP eCLIP8.12□□□□□ -1.11
CPS1-203ENST00000430249 CRACR2AQ9BSW2 395 aa8.12□□□□□ -1.11
CPS1-203ENST00000430249 FLT4P35916 1363 aa8.12□□□□□ -1.11
CPS1-203ENST00000430249 NPHP3Q7Z494 1330 aa8.12□□□□□ -1.11
CPS1-203ENST00000430249 TRIM27P14373 513 aa8.12□□□□□ -1.11
CPS1-203ENST00000430249 FERMT1Q9BQL6 677 aa8.12□□□□□ -1.11
CPS1-203ENST00000430249 PRPHP41219 470 aa8.12□□□□□ -1.11
CPS1-203ENST00000430249 NLRP5P59047 1200 aa8.12□□□□□ -1.11
CPS1-203ENST00000430249 AMER1Q5JTC6 1135 aaPredicted RBP8.12□□□□□ -1.11
CPS1-203ENST00000430249 BCL11BQ9C0K0 894 aaPredicted RBP8.12□□□□□ -1.11
CPS1-203ENST00000430249 ANKIB1Q9P2G1 1089 aa8.12□□□□□ -1.11
CPS1-203ENST00000430249 EXOC6BQ9Y2D4 811 aa8.12□□□□□ -1.11
CPS1-203ENST00000430249 IFIT3O14879 490 aaKnown RBP8.11□□□□□ -1.11
CPS1-203ENST00000430249 PAFAH1B1P43034 410 aa8.11□□□□□ -1.11
CPS1-203ENST00000430249 IDI1Q13907 227 aa8.11□□□□□ -1.11
CPS1-203ENST00000430249 DDX46Q7L014 1031 aaKnown RBP8.11□□□□□ -1.11
CPS1-203ENST00000430249 CACNA2D4Q7Z3S7 1137 aa8.11□□□□□ -1.11
CPS1-203ENST00000430249 KCNG4Q8TDN1 519 aa8.11□□□□□ -1.11
CPS1-203ENST00000430249 KAT14Q9H8E8 782 aa8.11□□□□□ -1.11
CPS1-203ENST00000430249 STK24Q9Y6E0 443 aa8.11□□□□□ -1.11
CPS1-203ENST00000430249 AOX1Q06278 1338 aa8.11□□□□□ -1.11
CPS1-203ENST00000430249 ABCC2Q92887 1545 aa8.11□□□□□ -1.11
CPS1-203ENST00000430249 PPP1R2P41236 205 aa8.11□□□□□ -1.11
CPS1-203ENST00000430249 ENOX2Q16206 610 aaKnown RBP8.11□□□□□ -1.11
CPS1-203ENST00000430249 CNNM3Q8NE01 707 aa8.11□□□□□ -1.11
CPS1-203ENST00000430249 NEK1Q96PY6 1258 aa8.11□□□□□ -1.11
CPS1-203ENST00000430249 CDCA7Q9BWT1 371 aaPredicted RBP8.11□□□□□ -1.11
CPS1-203ENST00000430249 CABP5Q9NP86 173 aa8.11□□□□□ -1.11
CPS1-203ENST00000430249 MAP3K2Q9Y2U5 619 aa8.11□□□□□ -1.11
CPS1-203ENST00000430249 PAXBP1Q9Y5B6 917 aa8.11□□□□□ -1.11
CPS1-203ENST00000430249 NUTM2BA6NNL0 878 aaPredicted RBP8.11□□□□□ -1.11
CPS1-203ENST00000430249 NUTM2EB1AL46 878 aaPredicted RBP8.11□□□□□ -1.11
CPS1-203ENST00000430249 IARSP41252 1262 aaKnown RBP8.11□□□□□ -1.11
CPS1-203ENST00000430249 NUTM2AQ8IVF1 878 aaPredicted RBP8.11□□□□□ -1.11
CPS1-203ENST00000430249 KIF24Q5T7B8 1368 aa8.11□□□□□ -1.11
CPS1-203ENST00000430249 SSBP05455 408 aaKnown RBP eCLIP8.11□□□□□ -1.11
CPS1-203ENST00000430249 IL15P40933 162 aaPredicted RBP8.11□□□□□ -1.11
CPS1-203ENST00000430249 CKAP4Q07065 602 aaKnown RBP8.11□□□□□ -1.11
CPS1-203ENST00000430249 MFSD6Q6ZSS7 791 aa8.11□□□□□ -1.11
CPS1-203ENST00000430249 WAPLQ7Z5K2 1190 aa8.11□□□□□ -1.11
CPS1-203ENST00000430249 MBIPQ9NS73 344 aa8.11□□□□□ -1.11
CPS1-203ENST00000430249 B4DLN1 442 aa8.1□□□□□ -1.11
CPS1-203ENST00000430249 STX6O43752 255 aa8.1□□□□□ -1.11
CPS1-203ENST00000430249 PLCG2P16885 1265 aa8.1□□□□□ -1.11
CPS1-203ENST00000430249 MRPL12P52815 198 aaKnown RBP8.1□□□□□ -1.11
CPS1-203ENST00000430249 LRRC45Q96CN5 670 aa8.1□□□□□ -1.11
CPS1-203ENST00000430249 FEZ1Q99689 392 aa8.1□□□□□ -1.11
CPS1-203ENST00000430249 SEPT11Q9NVA2 429 aaKnown RBP8.1□□□□□ -1.11
CPS1-203ENST00000430249 ACEP12821 1306 aa8.1□□□□□ -1.11
CPS1-203ENST00000430249 NBPF7P0C2Y1 421 aaPredicted RBP8.1□□□□□ -1.11
CPS1-203ENST00000430249 KLHL40Q2TBA0 621 aa8.1□□□□□ -1.11
CPS1-203ENST00000430249 DHX37Q8IY37 1157 aaKnown RBP8.1□□□□□ -1.11
CPS1-203ENST00000430249 PAF1Q8N7H5 531 aa8.1□□□□□ -1.11
CPS1-203ENST00000430249 CLIP2Q9UDT6 1046 aa8.1□□□□□ -1.11
CPS1-203ENST00000430249 EIF4G3O43432 1585 aaKnown RBP8.1□□□□□ -1.11
CPS1-203ENST00000430249 GIGYF2Q6Y7W6 1299 aaKnown RBP8.1□□□□□ -1.11
CPS1-203ENST00000430249 TBC1D32Q96NH3 1257 aa8.1□□□□□ -1.11
CPS1-203ENST00000430249 MAPKBP1O60336 1514 aa8.1□□□□□ -1.11
CPS1-203ENST00000430249 ADGBQ8N7X0 1667 aa8.1□□□□□ -1.11
CPS1-203ENST00000430249 PRIMPOLQ96LW4 560 aa8.1□□□□□ -1.11
CPS1-203ENST00000430249 PLVAPQ9BX97 442 aa8.1□□□□□ -1.11
CPS1-203ENST00000430249 BOLA2Q9H3K6 86 aa8.1□□□□□ -1.11
CPS1-203ENST00000430249 ABCF2Q9UG63 623 aa8.1□□□□□ -1.11
CPS1-203ENST00000430249 TRAPPC8Q9Y2L5 1435 aa8.1□□□□□ -1.11
CPS1-203ENST00000430249 EMILIN1Q9Y6C2 1016 aa8.1□□□□□ -1.11
CPS1-203ENST00000430249 NPATQ14207 1427 aa8.1□□□□□ -1.11
CPS1-203ENST00000430249 HOXB7P09629 217 aa8.09□□□□□ -1.11
CPS1-203ENST00000430249 METAP2P50579 478 aaKnown RBP eCLIP8.09□□□□□ -1.11
CPS1-203ENST00000430249 ZC3H6P61129 1189 aaKnown RBP8.09□□□□□ -1.11
CPS1-203ENST00000430249 STAMBPO95630 424 aa8.09□□□□□ -1.11
CPS1-203ENST00000430249 CCDC96Q2M329 555 aa8.09□□□□□ -1.11
CPS1-203ENST00000430249 TMEM67Q5HYA8 995 aa8.09□□□□□ -1.11
CPS1-203ENST00000430249 ANKRD44Q8N8A2 993 aa8.09□□□□□ -1.11
CPS1-203ENST00000430249 MAP3K5Q99683 1374 aa8.09□□□□□ -1.11
CPS1-203ENST00000430249 ATP8B2P98198 1209 aa8.09□□□□□ -1.11
CPS1-203ENST00000430249 CCDC102BQ68D86 513 aa8.09□□□□□ -1.11
CPS1-203ENST00000430249 PKNOX2Q96KN3 472 aa8.09□□□□□ -1.11
CPS1-203ENST00000430249 SYCE3A1L190 88 aa8.09□□□□□ -1.11
CPS1-203ENST00000430249 MYO1BO43795 1136 aa8.09□□□□□ -1.11
CPS1-203ENST00000430249 GJB2P29033 226 aa8.09□□□□□ -1.11
CPS1-203ENST00000430249 SMC1AQ14683 1233 aaKnown RBP8.09□□□□□ -1.11
CPS1-203ENST00000430249 ZMYM3Q14202 1370 aa8.09□□□□□ -1.11
CPS1-203ENST00000430249 RBM25P49756 843 aaKnown RBP8.09□□□□□ -1.12
CPS1-203ENST00000430249 TBC1D9Q6ZT07 1266 aa8.09□□□□□ -1.12
CPS1-203ENST00000430249 FSIP1Q8NA03 581 aa8.09□□□□□ -1.12
CPS1-203ENST00000430249 BBXQ8WY36 941 aaPredicted RBP8.09□□□□□ -1.12
CPS1-203ENST00000430249 SRRTQ9BXP5 876 aaKnown RBP8.09□□□□□ -1.12
CPS1-203ENST00000430249 ZNF608Q9ULD9 1512 aaPredicted RBP8.08□□□□□ -1.12
CPS1-203ENST00000430249 KDM4AO75164 1064 aa8.08□□□□□ -1.12
CPS1-203ENST00000430249 KSR2Q6VAB6 950 aa8.08□□□□□ -1.12
CPS1-203ENST00000430249 ESR2Q92731 530 aa8.08□□□□□ -1.12
CPS1-203ENST00000430249 ANKRD2Q9GZV1 360 aa8.08□□□□□ -1.12
CPS1-203ENST00000430249 HDAC9Q9UKV0 1011 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms