RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 IBTKQ9P2D0 1353 aaPredicted RBP22■■□□□ 1.11
UBE3D-204ENST00000430071 C8orf58Q8NAV2 365 aa21.99■■□□□ 1.11
UBE3D-204ENST00000430071 TAOK3Q9H2K8 898 aa21.99■■□□□ 1.11
UBE3D-204ENST00000430071 IFT57Q9NWB7 429 aa21.99■■□□□ 1.11
UBE3D-204ENST00000430071 KDM2BQ8NHM5 1336 aa21.99■■□□□ 1.11
UBE3D-204ENST00000430071 LTBP3Q9NS15 1303 aa21.99■■□□□ 1.11
UBE3D-204ENST00000430071 GLTPD2A6NH11 291 aa21.99■■□□□ 1.11
UBE3D-204ENST00000430071 TOMM70O94826 608 aa21.99■■□□□ 1.11
UBE3D-204ENST00000430071 WDR90Q96KV7 1748 aa21.98■■□□□ 1.11
UBE3D-204ENST00000430071 SNED1Q8TER0 1413 aa21.98■■□□□ 1.11
UBE3D-204ENST00000430071 NLRP10Q86W26 655 aa21.98■■□□□ 1.11
UBE3D-204ENST00000430071 RIC1Q4ADV7 1423 aa21.97■■□□□ 1.11
UBE3D-204ENST00000430071 POTECB2RU33 542 aa21.97■■□□□ 1.11
UBE3D-204ENST00000430071 HOXB7P09629 217 aa21.97■■□□□ 1.11
UBE3D-204ENST00000430071 HSPA6P17066 643 aa21.97■■□□□ 1.11
UBE3D-204ENST00000430071 GNAI1P63096 354 aa21.97■■□□□ 1.11
UBE3D-204ENST00000430071 TCIRG1Q13488 830 aa21.97■■□□□ 1.11
UBE3D-204ENST00000430071 PARP10Q53GL7 1025 aa21.97■■□□□ 1.11
UBE3D-204ENST00000430071 CCDC93Q567U6 631 aa21.97■■□□□ 1.11
UBE3D-204ENST00000430071 PPP1R42Q7Z4L9 355 aa21.97■■□□□ 1.11
UBE3D-204ENST00000430071 UTP14AQ9BVJ6 771 aaKnown RBP21.97■■□□□ 1.11
UBE3D-204ENST00000430071 ZC3H4Q9UPT8 1303 aaKnown RBP21.96■■□□□ 1.11
UBE3D-204ENST00000430071 TSPYL6Q8N831 410 aa21.96■■□□□ 1.11
UBE3D-204ENST00000430071 TSR2Q969E8 191 aaKnown RBP21.96■■□□□ 1.11
UBE3D-204ENST00000430071 PHAXQ9H814 394 aaKnown RBP21.96■■□□□ 1.11
UBE3D-204ENST00000430071 ZNF277Q9NRM2 450 aaPredicted RBP21.96■■□□□ 1.11
UBE3D-204ENST00000430071 TCERG1O14776 1098 aaKnown RBP21.95■■□□□ 1.1
UBE3D-204ENST00000430071 HCLS1P14317 486 aaPredicted RBP21.95■■□□□ 1.1
UBE3D-204ENST00000430071 ALDH1B1P30837 517 aa21.95■■□□□ 1.1
UBE3D-204ENST00000430071 HOXA10P31260 410 aaPredicted RBP21.95■■□□□ 1.1
UBE3D-204ENST00000430071 DBF4Q9UBU7 674 aaPredicted RBP21.95■■□□□ 1.1
UBE3D-204ENST00000430071 COL4A5P29400 1685 aa21.94■■□□□ 1.1
UBE3D-204ENST00000430071 SLC10A5Q5PT55 438 aa21.94■■□□□ 1.1
UBE3D-204ENST00000430071 SOGA3Q5TF21 947 aa21.94■■□□□ 1.1
UBE3D-204ENST00000430071 PLBD2Q8NHP8 589 aa21.94■■□□□ 1.1
UBE3D-204ENST00000430071 RPGRQ92834 1020 aaKnown RBP21.94■■□□□ 1.1
UBE3D-204ENST00000430071 COL4A1P02462 1669 aa21.93■■□□□ 1.1
UBE3D-204ENST00000430071 ATP5J2-PTCD1G3V325 749 aa21.93■■□□□ 1.1
UBE3D-204ENST00000430071 FKBP4Q02790 459 aaKnown RBP eCLIP21.93■■□□□ 1.1
UBE3D-204ENST00000430071 ANKRD13DQ6ZTN6 518 aa21.93■■□□□ 1.1
UBE3D-204ENST00000430071 WWC1Q8IX03 1113 aa21.93■■□□□ 1.1
UBE3D-204ENST00000430071 SALL2Q9Y467 1007 aaPredicted RBP21.93■■□□□ 1.1
UBE3D-204ENST00000430071 DDNO94850 711 aaPredicted RBP21.92■■□□□ 1.1
UBE3D-204ENST00000430071 RBM46Q8TBY0 533 aaKnown RBP21.92■■□□□ 1.1
UBE3D-204ENST00000430071 CCDC27Q2M243 656 aa21.91■■□□□ 1.1
UBE3D-204ENST00000430071 NCBP3Q53F19 620 aaKnown RBP21.91■■□□□ 1.1
UBE3D-204ENST00000430071 HSP90AB3PQ58FF7 597 aa21.91■■□□□ 1.1
UBE3D-204ENST00000430071 C16orf71Q8IYS4 520 aaPredicted RBP21.91■■□□□ 1.1
UBE3D-204ENST00000430071 NLRP3Q96P20 1036 aa21.91■■□□□ 1.1
UBE3D-204ENST00000430071 CRAMP1Q96RY5 1269 aa21.91■■□□□ 1.1
UBE3D-204ENST00000430071 ISCA1Q9BUE6 129 aa21.91■■□□□ 1.1
UBE3D-204ENST00000430071 HYPKQ9NX55 129 aa21.91■■□□□ 1.1
UBE3D-204ENST00000430071 TRMT112Q9UI30 125 aaKnown RBP21.91■■□□□ 1.1
UBE3D-204ENST00000430071 CALD1Q05682 793 aaKnown RBP21.9■■□□□ 1.1
UBE3D-204ENST00000430071 CACNA1FO60840 1977 aa21.9■■□□□ 1.1
UBE3D-204ENST00000430071 RBM17Q96I25 401 aaKnown RBP21.89■■□□□ 1.1
UBE3D-204ENST00000430071 ZNF541Q9H0D2 1346 aa21.89■■□□□ 1.09
UBE3D-204ENST00000430071 VEGFAP15692 232 aaPredicted RBP21.88■■□□□ 1.09
UBE3D-204ENST00000430071 HTRA3P83110 453 aa21.88■■□□□ 1.09
UBE3D-204ENST00000430071 RTL5Q5HYW3 569 aaPredicted RBP21.88■■□□□ 1.09
UBE3D-204ENST00000430071 RTKN2Q8IZC4 609 aa21.88■■□□□ 1.09
UBE3D-204ENST00000430071 ABCC4O15439 1325 aa21.88■■□□□ 1.09
UBE3D-204ENST00000430071 SCN4AP35499 1836 aa21.88■■□□□ 1.09
UBE3D-204ENST00000430071 PPEF1O14829 653 aaPredicted RBP21.87■■□□□ 1.09
UBE3D-204ENST00000430071 DPY19L2Q6NUT2 758 aa21.87■■□□□ 1.09
UBE3D-204ENST00000430071 FAM89AQ96GI7 184 aa21.87■■□□□ 1.09
UBE3D-204ENST00000430071 SH3TC1Q8TE82 1336 aa21.87■■□□□ 1.09
UBE3D-204ENST00000430071 IARSP41252 1262 aaKnown RBP21.87■■□□□ 1.09
UBE3D-204ENST00000430071 POTEIP0CG38 1075 aa21.86■■□□□ 1.09
UBE3D-204ENST00000430071 POTEJP0CG39 1038 aa21.86■■□□□ 1.09
UBE3D-204ENST00000430071 PSMD1Q99460 953 aa21.86■■□□□ 1.09
UBE3D-204ENST00000430071 RNF123Q5XPI4 1314 aa21.85■■□□□ 1.09
UBE3D-204ENST00000430071 RIC3Q7Z5B4 369 aa21.85■■□□□ 1.09
UBE3D-204ENST00000430071 JARID2Q92833 1246 aaPredicted RBP21.85■■□□□ 1.09
UBE3D-204ENST00000430071 ZNF521Q96K83 1311 aa21.83■■□□□ 1.09
UBE3D-204ENST00000430071 MYH3P11055 1940 aa21.83■■□□□ 1.09
UBE3D-204ENST00000430071 LRRC37AA6NMS7 1700 aa21.83■■□□□ 1.09
UBE3D-204ENST00000430071 G2E3Q7L622 706 aa21.83■■□□□ 1.08
UBE3D-204ENST00000430071 MYD88Q99836 296 aa21.83■■□□□ 1.08
UBE3D-204ENST00000430071 SPINK5Q9NQ38 1064 aaPredicted RBP21.83■■□□□ 1.08
UBE3D-204ENST00000430071 LTBP1Q14766 1721 aa21.82■■□□□ 1.08
UBE3D-204ENST00000430071 APLP1P51693 650 aa21.82■■□□□ 1.08
UBE3D-204ENST00000430071 GOLGA2Q08379 1002 aa21.82■■□□□ 1.08
UBE3D-204ENST00000430071 FSTL1Q12841 308 aa21.82■■□□□ 1.08
UBE3D-204ENST00000430071 CCDC30Q5VVM6 783 aa21.82■■□□□ 1.08
UBE3D-204ENST00000430071 CC2D2BQ6DHV5 1058 aa21.82■■□□□ 1.08
UBE3D-204ENST00000430071 DNAJC5GQ8N7S2 189 aa21.82■■□□□ 1.08
UBE3D-204ENST00000430071 ATP6V0A2Q9Y487 856 aa21.82■■□□□ 1.08
UBE3D-204ENST00000430071 FZD9O00144 591 aa21.81■■□□□ 1.08
UBE3D-204ENST00000430071 TRIM28Q13263 835 aaKnown RBP21.81■■□□□ 1.08
UBE3D-204ENST00000430071 TWISTNBQ3B726 338 aaPredicted RBP21.81■■□□□ 1.08
UBE3D-204ENST00000430071 SMC1BQ8NDV3 1235 aa21.81■■□□□ 1.08
UBE3D-204ENST00000430071 SPEF2Q9C093 1822 aa21.81■■□□□ 1.08
UBE3D-204ENST00000430071 WDR63Q8IWG1 891 aa21.8■■□□□ 1.08
UBE3D-204ENST00000430071 IL16Q14005 1332 aa21.8■■□□□ 1.08
UBE3D-204ENST00000430071 FANCIQ9NVI1 1328 aa21.8■■□□□ 1.08
UBE3D-204ENST00000430071 DUOX1Q9NRD9 1551 aa21.79■■□□□ 1.08
UBE3D-204ENST00000430071 IRS4O14654 1257 aaPredicted RBP21.79■■□□□ 1.08
UBE3D-204ENST00000430071 DDX46Q7L014 1031 aaKnown RBP21.79■■□□□ 1.08
UBE3D-204ENST00000430071 CELF1Q92879 486 aaKnown RBP21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms