RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 ATP5J2-PTCD1G3V325 749 aa18.99■□□□□ 0.63
GARNL3-204ENST00000429629 GTF2E1P29083 439 aaPredicted RBP18.99■□□□□ 0.63
GARNL3-204ENST00000429629 BCL2L13Q9BXK5 485 aa18.99■□□□□ 0.63
GARNL3-204ENST00000429629 TRMT112Q9UI30 125 aaKnown RBP18.99■□□□□ 0.63
GARNL3-204ENST00000429629 RIC1Q4ADV7 1423 aa18.99■□□□□ 0.63
GARNL3-204ENST00000429629 SH3TC1Q8TE82 1336 aa18.99■□□□□ 0.63
GARNL3-204ENST00000429629 NPHP1O15259 732 aa18.98■□□□□ 0.63
GARNL3-204ENST00000429629 BCAR3O75815 825 aa18.98■□□□□ 0.63
GARNL3-204ENST00000429629 PCCAP05165 728 aaPredicted RBP18.98■□□□□ 0.63
GARNL3-204ENST00000429629 RCAN3Q9UKA8 241 aa18.98■□□□□ 0.63
GARNL3-204ENST00000429629 F6X3S4 739 aa18.97■□□□□ 0.63
GARNL3-204ENST00000429629 H7C1W4 665 aa18.97■□□□□ 0.63
GARNL3-204ENST00000429629 CACNA1FO60840 1977 aa18.97■□□□□ 0.63
GARNL3-204ENST00000429629 GCKRQ14397 625 aa18.96■□□□□ 0.63
GARNL3-204ENST00000429629 ATF7IPQ6VMQ6 1270 aa18.96■□□□□ 0.63
GARNL3-204ENST00000429629 SRCIN1Q9C0H9 1055 aa18.96■□□□□ 0.63
GARNL3-204ENST00000429629 NRXN2Q9P2S2 1712 aa18.96■□□□□ 0.63
GARNL3-204ENST00000429629 H0YIN7 160 aa18.95■□□□□ 0.62
GARNL3-204ENST00000429629 CCT4P50991 539 aaKnown RBP18.95■□□□□ 0.62
GARNL3-204ENST00000429629 ERFEQ4G0M1 354 aa18.95■□□□□ 0.62
GARNL3-204ENST00000429629 FAM177BA6PVY3 158 aa18.94■□□□□ 0.62
GARNL3-204ENST00000429629 KCNA3P22001 575 aa18.94■□□□□ 0.62
GARNL3-204ENST00000429629 CWF19L2Q2TBE0 894 aaKnown RBP18.94■□□□□ 0.62
GARNL3-204ENST00000429629 CRY2Q49AN0 593 aa18.94■□□□□ 0.62
GARNL3-204ENST00000429629 ZKSCAN2Q63HK3 967 aa18.94■□□□□ 0.62
GARNL3-204ENST00000429629 NUTM1Q86Y26 1132 aa18.94■□□□□ 0.62
GARNL3-204ENST00000429629 NLRP3Q96P20 1036 aa18.94■□□□□ 0.62
GARNL3-204ENST00000429629 CDHR2Q9BYE9 1310 aa18.94■□□□□ 0.62
GARNL3-204ENST00000429629 SRGNP10124 158 aa18.93■□□□□ 0.62
GARNL3-204ENST00000429629 MS4A1P11836 297 aa18.93■□□□□ 0.62
GARNL3-204ENST00000429629 INTS3Q68E01 1043 aaKnown RBP18.93■□□□□ 0.62
GARNL3-204ENST00000429629 FAM89AQ96GI7 184 aa18.93■□□□□ 0.62
GARNL3-204ENST00000429629 PXDNLA1KZ92 1463 aa18.92■□□□□ 0.62
GARNL3-204ENST00000429629 IRS4O14654 1257 aaPredicted RBP18.92■□□□□ 0.62
GARNL3-204ENST00000429629 TRIM27P14373 513 aa18.92■□□□□ 0.62
GARNL3-204ENST00000429629 DPEP1P16444 411 aa18.92■□□□□ 0.62
GARNL3-204ENST00000429629 HOXA10P31260 410 aaPredicted RBP18.92■□□□□ 0.62
GARNL3-204ENST00000429629 SF3B3Q15393 1217 aaKnown RBP18.92■□□□□ 0.62
GARNL3-204ENST00000429629 STYK1Q6J9G0 422 aa18.92■□□□□ 0.62
GARNL3-204ENST00000429629 SLC4A10Q6U841 1118 aa18.92■□□□□ 0.62
GARNL3-204ENST00000429629 NLGN2Q8NFZ4 835 aa18.92■□□□□ 0.62
GARNL3-204ENST00000429629 MASTLQ96GX5 879 aa18.92■□□□□ 0.62
GARNL3-204ENST00000429629 PLA2G12BQ9BX93 195 aa18.92■□□□□ 0.62
GARNL3-204ENST00000429629 NUP98P52948 1817 aa18.92■□□□□ 0.62
GARNL3-204ENST00000429629 UTYO14607 1347 aa18.92■□□□□ 0.62
GARNL3-204ENST00000429629 A0A0G2JLW4 131 aa18.91■□□□□ 0.62
GARNL3-204ENST00000429629 NPR1P16066 1061 aa18.91■□□□□ 0.62
GARNL3-204ENST00000429629 CASP7P55210 303 aa18.91■□□□□ 0.62
GARNL3-204ENST00000429629 C2CD5Q86YS7 1000 aa18.91■□□□□ 0.62
GARNL3-204ENST00000429629 PIM2Q9P1W9 311 aa18.91■□□□□ 0.62
GARNL3-204ENST00000429629 ABCC4O15439 1325 aa18.91■□□□□ 0.62
GARNL3-204ENST00000429629 GRM8O00222 908 aa18.9■□□□□ 0.62
GARNL3-204ENST00000429629 PDE8AO60658 829 aa18.9■□□□□ 0.62
GARNL3-204ENST00000429629 ALDH1B1P30837 517 aa18.9■□□□□ 0.62
GARNL3-204ENST00000429629 KLHL34Q8N239 644 aa18.9■□□□□ 0.62
GARNL3-204ENST00000429629 FRAT1Q92837 279 aaPredicted RBP18.9■□□□□ 0.62
GARNL3-204ENST00000429629 CNKSR1Q969H4 720 aa18.9■□□□□ 0.62
GARNL3-204ENST00000429629 HDAC5Q9UQL6 1122 aa18.9■□□□□ 0.62
GARNL3-204ENST00000429629 ABCC12Q96J65 1359 aa18.9■□□□□ 0.62
GARNL3-204ENST00000429629 SYNE4Q8N205 404 aa18.89■□□□□ 0.61
GARNL3-204ENST00000429629 CCDC24Q8N4L8 307 aa18.89■□□□□ 0.61
GARNL3-204ENST00000429629 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.89■□□□□ 0.61
GARNL3-204ENST00000429629 CRAMP1Q96RY5 1269 aa18.89■□□□□ 0.61
GARNL3-204ENST00000429629 C9orf78Q9NZ63 289 aaPredicted RBP18.89■□□□□ 0.61
GARNL3-204ENST00000429629 HCLS1P14317 486 aaPredicted RBP18.88■□□□□ 0.61
GARNL3-204ENST00000429629 CHRNA5P30532 468 aa18.88■□□□□ 0.61
GARNL3-204ENST00000429629 TTLL6Q8N841 843 aa18.88■□□□□ 0.61
GARNL3-204ENST00000429629 UBE3BQ7Z3V4 1068 aa18.87■□□□□ 0.61
GARNL3-204ENST00000429629 DZIP1LQ8IYY4 767 aaKnown RBP18.87■□□□□ 0.61
GARNL3-204ENST00000429629 USP44Q9H0E7 712 aa18.87■□□□□ 0.61
GARNL3-204ENST00000429629 ARFGEF2Q9Y6D5 1785 aa18.87■□□□□ 0.61
GARNL3-204ENST00000429629 KIF13BQ9NQT8 1826 aa18.86■□□□□ 0.61
GARNL3-204ENST00000429629 CSF1RP07333 972 aa18.86■□□□□ 0.61
GARNL3-204ENST00000429629 PDE3AQ14432 1141 aa18.86■□□□□ 0.61
GARNL3-204ENST00000429629 DALRD3Q5D0E6 543 aaKnown RBP18.86■□□□□ 0.61
GARNL3-204ENST00000429629 RBM17Q96I25 401 aaKnown RBP18.86■□□□□ 0.61
GARNL3-204ENST00000429629 DCAF8L1A6NGE4 600 aa18.85■□□□□ 0.61
GARNL3-204ENST00000429629 BBOX1O75936 387 aa18.85■□□□□ 0.61
GARNL3-204ENST00000429629 RPGRQ92834 1020 aaKnown RBP18.85■□□□□ 0.61
GARNL3-204ENST00000429629 ANKRD36CQ5JPF3 1778 aa18.84■□□□□ 0.61
GARNL3-204ENST00000429629 GRIN3BO60391 1043 aa18.84■□□□□ 0.61
GARNL3-204ENST00000429629 CCDC152Q4G0S7 254 aa18.84■□□□□ 0.61
GARNL3-204ENST00000429629 C3orf67Q6ZVT6 689 aa18.84■□□□□ 0.61
GARNL3-204ENST00000429629 TTLL11Q8NHH1 800 aa18.84■□□□□ 0.61
GARNL3-204ENST00000429629 ZNF622Q969S3 477 aaKnown RBP eCLIP18.84■□□□□ 0.61
GARNL3-204ENST00000429629 AFDNP55196 1824 aaKnown RBP18.84■□□□□ 0.61
GARNL3-204ENST00000429629 RTL9Q8NET4 1388 aa18.83■□□□□ 0.61
GARNL3-204ENST00000429629 GNAI3P08754 354 aa18.83■□□□□ 0.6
GARNL3-204ENST00000429629 NBPF7P0C2Y1 421 aaPredicted RBP18.83■□□□□ 0.6
GARNL3-204ENST00000429629 CTSWP56202 376 aa18.83■□□□□ 0.6
GARNL3-204ENST00000429629 GRIPAP1Q4V328 841 aa18.83■□□□□ 0.6
GARNL3-204ENST00000429629 RTL5Q5HYW3 569 aaPredicted RBP18.83■□□□□ 0.6
GARNL3-204ENST00000429629 DDX46Q7L014 1031 aaKnown RBP18.83■□□□□ 0.6
GARNL3-204ENST00000429629 TMC4Q7Z404 712 aa18.83■□□□□ 0.6
GARNL3-204ENST00000429629 FTSJ3Q8IY81 847 aaKnown RBP18.83■□□□□ 0.6
GARNL3-204ENST00000429629 FOXO4P98177 505 aa18.82■□□□□ 0.6
GARNL3-204ENST00000429629 SOGA3Q5TF21 947 aa18.82■□□□□ 0.6
GARNL3-204ENST00000429629 CC2D2BQ6DHV5 1058 aa18.82■□□□□ 0.6
GARNL3-204ENST00000429629 C7orf43Q8WVR3 580 aa18.82■□□□□ 0.6
GARNL3-204ENST00000429629 RABL6Q3YEC7 729 aaPredicted RBP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms